RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
VCL-207ENST00000624354 CFAP74Q9C0B2 1584 aa10.82□□□□□ -0.68
VCL-207ENST00000624354 GRPEL1Q9HAV7 217 aa10.82□□□□□ -0.68
VCL-207ENST00000624354 ZBTB7BO15156 539 aaPredicted RBP10.82□□□□□ -0.68
VCL-207ENST00000624354 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
VCL-207ENST00000624354 TNPO1Q92973 898 aaKnown RBP10.82□□□□□ -0.68
VCL-207ENST00000624354 PIK3C2BO00750 1634 aa10.82□□□□□ -0.68
VCL-207ENST00000624354 ARHGAP31Q2M1Z3 1444 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 PTMSP20962 102 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 CDK19Q9BWU1 502 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 CABP1Q9NZU7 370 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 CD163L1Q9NR16 1453 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
VCL-207ENST00000624354 PTPRMP28827 1452 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 DIP2BQ9P265 1576 aa10.81□□□□□ -0.68
VCL-207ENST00000624354 VAMP4O75379 141 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 RAB3GAP1Q15042 981 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 GNAI1P63096 354 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 MRPL50Q8N5N7 158 aaKnown RBP10.8□□□□□ -0.68
VCL-207ENST00000624354 PPIP5K1Q6PFW1 1433 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 YTHDC2Q9H6S0 1430 aaKnown RBP10.8□□□□□ -0.68
VCL-207ENST00000624354 ERBB4Q15303 1308 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 SIGLEC1Q9BZZ2 1709 aa10.8□□□□□ -0.68
VCL-207ENST00000624354 C1orf115Q9H7X2 142 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 PRDM4Q9UKN5 801 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 K7ELQ4 463 aaPredicted RBP10.79□□□□□ -0.68
VCL-207ENST00000624354 TBC1D9Q6ZT07 1266 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.79□□□□□ -0.686e-7■■■■□ 23.3
VCL-207ENST00000624354 POLKQ9UBT6 870 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 FAM135BQ49AJ0 1406 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 KIF2CQ99661 725 aa10.79□□□□□ -0.68
VCL-207ENST00000624354 HMOX1P09601 288 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 IFT57Q9NWB7 429 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 PIK3R4Q99570 1358 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 THUMPD2Q9BTF0 503 aaKnown RBP10.78□□□□□ -0.68
VCL-207ENST00000624354 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 PTCH1Q13635 1447 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 ELL2O00472 640 aaPredicted RBP10.78□□□□□ -0.68
VCL-207ENST00000624354 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
VCL-207ENST00000624354 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
VCL-207ENST00000624354 GOLGA6L22H0YM25 854 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 ANKRD26Q9UPS8 1709 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 CDC45O75419 566 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 FBLN1P23142 703 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 CFAP44Q96MT7 982 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 API5Q9BZZ5 524 aaKnown RBP10.77□□□□□ -0.69
VCL-207ENST00000624354 ABCC4O15439 1325 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 CDC42BPGQ6DT37 1551 aa10.77□□□□□ -0.69
VCL-207ENST00000624354 NUTM2FA1L443 756 aa10.76□□□□□ -0.69
VCL-207ENST00000624354 TWISTNBQ3B726 338 aaPredicted RBP10.76□□□□□ -0.69
VCL-207ENST00000624354 CD2BP2O95400 341 aaKnown RBP10.76□□□□□ -0.69
VCL-207ENST00000624354 LMOD3Q0VAK6 560 aa10.76□□□□□ -0.69
VCL-207ENST00000624354 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
VCL-207ENST00000624354 MBIPQ9NS73 344 aa10.76□□□□□ -0.69
VCL-207ENST00000624354 ARHGEF40Q8TER5 1519 aa10.76□□□□□ -0.69
VCL-207ENST00000624354 NEO1Q92859 1461 aa10.75□□□□□ -0.69
VCL-207ENST00000624354 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
VCL-207ENST00000624354 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
VCL-207ENST00000624354 ZNF853P0CG23 659 aa10.75□□□□□ -0.69
VCL-207ENST00000624354 MAP7D2Q96T17 732 aa10.74□□□□□ -0.69
VCL-207ENST00000624354 ARID3AQ99856 593 aa10.74□□□□□ -0.69
VCL-207ENST00000624354 GAS2L3Q86XJ1 694 aa10.74□□□□□ -0.69
VCL-207ENST00000624354 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
VCL-207ENST00000624354 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
VCL-207ENST00000624354 GAS2L2Q8NHY3 880 aa10.74□□□□□ -0.69
VCL-207ENST00000624354 IL13P35225 146 aa10.73□□□□□ -0.69
VCL-207ENST00000624354 SSFA2P28290 1259 aa10.73□□□□□ -0.69
VCL-207ENST00000624354 RABEP1Q15276 862 aa10.73□□□□□ -0.69
VCL-207ENST00000624354 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
VCL-207ENST00000624354 ATP7BP35670 1465 aa10.73□□□□□ -0.69
VCL-207ENST00000624354 REREQ9P2R6 1566 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 GSPT1P15170 499 aaKnown RBP10.72□□□□□ -0.69
VCL-207ENST00000624354 CLEC17AQ6ZS10 378 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 PLEKHM2Q8IWE5 1019 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 TMEM131LA2VDJ0 1609 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
VCL-207ENST00000624354 DCTPP1Q9H773 170 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
VCL-207ENST00000624354 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
VCL-207ENST00000624354 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
VCL-207ENST00000624354 FGD1P98174 961 aa10.71□□□□□ -0.69
VCL-207ENST00000624354 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
VCL-207ENST00000624354 KLHL40Q2TBA0 621 aa10.71□□□□□ -0.69
VCL-207ENST00000624354 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.71□□□□□ -0.69
VCL-207ENST00000624354 KIF20BQ96Q89 1820 aa10.71□□□□□ -0.7
VCL-207ENST00000624354 OFD1O75665 1012 aa10.71□□□□□ -0.7
VCL-207ENST00000624354 BAG4O95429 457 aaKnown RBP10.71□□□□□ -0.7
VCL-207ENST00000624354 TTC22Q5TAA0 569 aa10.71□□□□□ -0.7
VCL-207ENST00000624354 FAM13BQ9NYF5 915 aa10.71□□□□□ -0.7
VCL-207ENST00000624354 NUCB2P80303 420 aa10.7□□□□□ -0.7
VCL-207ENST00000624354 INTS3Q68E01 1043 aaKnown RBP10.7□□□□□ -0.7
VCL-207ENST00000624354 NME9Q86XW9 330 aa10.7□□□□□ -0.7
VCL-207ENST00000624354 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
VCL-207ENST00000624354 TERF1P54274 439 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms