RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
ATRX-213ENST00000624032 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
ATRX-213ENST00000624032 SOS2Q07890 1332 aaPredicted RBP15.09■□□□□ 0.01
ATRX-213ENST00000624032 ROBO1Q9Y6N7 1651 aa15.08■□□□□ 0.01
ATRX-213ENST00000624032 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
ATRX-213ENST00000624032 GCP02774 474 aa15.08■□□□□ 0
ATRX-213ENST00000624032 AMPHP49418 695 aa15.08■□□□□ 0
ATRX-213ENST00000624032 CDK12Q9NYV4 1490 aaPredicted RBP15.07■□□□□ 0
ATRX-213ENST00000624032 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
ATRX-213ENST00000624032 IL13P35225 146 aa15.07■□□□□ 0
ATRX-213ENST00000624032 INSRP06213 1382 aa15.07■□□□□ 0
ATRX-213ENST00000624032 MED1Q15648 1581 aaPredicted RBP15.07■□□□□ 0
ATRX-213ENST00000624032 NFAT5O94916 1531 aa15.06■□□□□ 0
ATRX-213ENST00000624032 USP19O94966 1318 aa15.06■□□□□ 0
ATRX-213ENST00000624032 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
ATRX-213ENST00000624032 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
ATRX-213ENST00000624032 ZC3H6P61129 1189 aaKnown RBP15.06■□□□□ 0
ATRX-213ENST00000624032 EIF4A2Q14240 407 aaKnown RBP15.06■□□□□ 0
ATRX-213ENST00000624032 TCERG1O14776 1098 aaKnown RBP15.05■□□□□ 0
ATRX-213ENST00000624032 KCNH5Q8NCM2 988 aa15.05■□□□□ 0
ATRX-213ENST00000624032 ANO8Q9HCE9 1232 aaPredicted RBP15.05■□□□□ -0
ATRX-213ENST00000624032 LTN1O94822 1766 aa15.05■□□□□ -0
ATRX-213ENST00000624032 TOM1O60784 492 aa15.04■□□□□ -0
ATRX-213ENST00000624032 HMOX1P09601 288 aa15.04■□□□□ -0
ATRX-213ENST00000624032 HOXC9P31274 260 aa15.04■□□□□ -0
ATRX-213ENST00000624032 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
ATRX-213ENST00000624032 USP35Q9P2H5 1018 aa15.04■□□□□ -0
ATRX-213ENST00000624032 SLIT3O75094 1523 aa15.04■□□□□ -0
ATRX-213ENST00000624032 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
ATRX-213ENST00000624032 FLT4P35916 1363 aa15.04■□□□□ -0
ATRX-213ENST00000624032 APAF1O14727 1248 aa15.03■□□□□ -0
ATRX-213ENST00000624032 CERKQ8TCT0 537 aa15.03■□□□□ -0
ATRX-213ENST00000624032 ARHGEF10O15013 1369 aa15.03■□□□□ -0
ATRX-213ENST00000624032 ARHGEF25Q86VW2 580 aa15.02■□□□□ -0
ATRX-213ENST00000624032 RRP1P56182 461 aaKnown RBP15.01□□□□□ -0.01
ATRX-213ENST00000624032 IL27Q8NEV9 243 aa15.01□□□□□ -0.01
ATRX-213ENST00000624032 RRP7AQ9Y3A4 280 aaKnown RBP15.01□□□□□ -0.01
ATRX-213ENST00000624032 NEFMP07197 916 aa15.01□□□□□ -0.01
ATRX-213ENST00000624032 AEBP1Q8IUX7 1158 aa15.01□□□□□ -0.01
ATRX-213ENST00000624032 IP6K1Q92551 441 aa15.01□□□□□ -0.01
ATRX-213ENST00000624032 RUNDC1Q96C34 613 aa15.01□□□□□ -0.01
ATRX-213ENST00000624032 PHRF1Q9P1Y6 1649 aaKnown RBP15□□□□□ -0.01
ATRX-213ENST00000624032 PDE4AP27815 886 aa15□□□□□ -0.01
ATRX-213ENST00000624032 NEUROD2Q15784 382 aa15□□□□□ -0.01
ATRX-213ENST00000624032 CHRNA2Q15822 529 aa15□□□□□ -0.01
ATRX-213ENST00000624032 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
ATRX-213ENST00000624032 PLEKHF1Q96S99 279 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 MS4A1P11836 297 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 PRKAR2BP31323 418 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 TCP11L2Q8N4U5 519 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 EXOC6Q8TAG9 804 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 RSPH6AQ9H0K4 717 aa14.99□□□□□ -0.01
ATRX-213ENST00000624032 SULT6B1Q6IMI4 303 aa14.98□□□□□ -0.01
ATRX-213ENST00000624032 LAS1LQ9Y4W2 734 aaKnown RBP14.98□□□□□ -0.01
ATRX-213ENST00000624032 AHDC1Q5TGY3 1603 aaPredicted RBP14.98□□□□□ -0.01
ATRX-213ENST00000624032 HAP1P54257 671 aaPredicted RBP14.98□□□□□ -0.01
ATRX-213ENST00000624032 LRRC59Q96AG4 307 aaKnown RBP14.98□□□□□ -0.01
ATRX-213ENST00000624032 EYA1Q99502 592 aa14.98□□□□□ -0.01
ATRX-213ENST00000624032 BACH2Q9BYV9 841 aa14.98□□□□□ -0.01
ATRX-213ENST00000624032 PHACTR3Q96KR7 559 aa14.97□□□□□ -0.01
ATRX-213ENST00000624032 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
ATRX-213ENST00000624032 FCHSD2O94868 740 aa14.97□□□□□ -0.01
ATRX-213ENST00000624032 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
ATRX-213ENST00000624032 RGPD5Q99666 1765 aa14.97□□□□□ -0.01
ATRX-213ENST00000624032 USHBP1Q8N6Y0 703 aa14.96□□□□□ -0.01
ATRX-213ENST00000624032 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
ATRX-213ENST00000624032 RTL1A6NKG5 1358 aa14.96□□□□□ -0.01
ATRX-213ENST00000624032 KIF24Q5T7B8 1368 aa14.96□□□□□ -0.01
ATRX-213ENST00000624032 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
ATRX-213ENST00000624032 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
ATRX-213ENST00000624032 MAPK8IP3Q9UPT6 1336 aa14.95□□□□□ -0.02
ATRX-213ENST00000624032 ANKRD24Q8TF21 1146 aa14.94□□□□□ -0.02
ATRX-213ENST00000624032 IQSEC2Q5JU85 1478 aa14.94□□□□□ -0.02
ATRX-213ENST00000624032 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
ATRX-213ENST00000624032 NBPF6Q5VWK0 638 aa14.94□□□□□ -0.02
ATRX-213ENST00000624032 NBPF4Q96M43 638 aa14.94□□□□□ -0.02
ATRX-213ENST00000624032 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
ATRX-213ENST00000624032 ABCA3Q99758 1704 aa14.94□□□□□ -0.02
ATRX-213ENST00000624032 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
ATRX-213ENST00000624032 PRDM11Q9NQV5 511 aa14.93□□□□□ -0.02
ATRX-213ENST00000624032 IGSF1Q8N6C5 1336 aa14.93□□□□□ -0.02
ATRX-213ENST00000624032 COL18A1P39060 1754 aa14.92□□□□□ -0.02
ATRX-213ENST00000624032 TMPOP42166 694 aaKnown RBP14.92□□□□□ -0.02
ATRX-213ENST00000624032 PDE3BQ13370 1112 aa14.92□□□□□ -0.02
ATRX-213ENST00000624032 PNNQ9H307 717 aaKnown RBP14.91□□□□□ -0.02
ATRX-213ENST00000624032 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
ATRX-213ENST00000624032 CPDO75976 1380 aa14.91□□□□□ -0.02
ATRX-213ENST00000624032 ZNF521Q96K83 1311 aa14.91□□□□□ -0.02
ATRX-213ENST00000624032 FAM83GA6ND36 823 aa14.9□□□□□ -0.02
ATRX-213ENST00000624032 RIPK4P57078 832 aa14.9□□□□□ -0.02
ATRX-213ENST00000624032 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
ATRX-213ENST00000624032 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
ATRX-213ENST00000624032 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
ATRX-213ENST00000624032 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
ATRX-213ENST00000624032 NUTM2AQ8IVF1 878 aaPredicted RBP14.89□□□□□ -0.03
ATRX-213ENST00000624032 ERBB3P21860 1342 aa14.89□□□□□ -0.03
ATRX-213ENST00000624032 CSB-PGBD3P0DP91 1061 aa14.89□□□□□ -0.03
ATRX-213ENST00000624032 TRIM35Q9UPQ4 493 aa14.89□□□□□ -0.03
ATRX-213ENST00000624032 NLRP2Q9NX02 1062 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms