RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
CHD1L-210ENST00000622533 SSFA2P28290 1259 aa16.19■□□□□ 0.18
CHD1L-210ENST00000622533 PTPRMP28827 1452 aa16.19■□□□□ 0.18
CHD1L-210ENST00000622533 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
CHD1L-210ENST00000622533 PTMSP20962 102 aa16.18■□□□□ 0.18
CHD1L-210ENST00000622533 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
CHD1L-210ENST00000622533 PRDM10Q9NQV6 1147 aa16.17■□□□□ 0.18
CHD1L-210ENST00000622533 DDX49Q9Y6V7 483 aaKnown RBP16.17■□□□□ 0.18
CHD1L-210ENST00000622533 CD163L1Q9NR16 1453 aa16.17■□□□□ 0.18
CHD1L-210ENST00000622533 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
CHD1L-210ENST00000622533 GCC1Q96CN9 775 aa16.17■□□□□ 0.18
CHD1L-210ENST00000622533 UQCRHLA0A096LP55 91 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 UQCRHP07919 91 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 IDI1Q13907 227 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHD1L-210ENST00000622533 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
CHD1L-210ENST00000622533 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
CHD1L-210ENST00000622533 BMP2KLQ5H9B9 411 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 DIP2CQ9Y2E4 1556 aa16.16■□□□□ 0.18
CHD1L-210ENST00000622533 NCLP19338 710 aaKnown RBP16.15■□□□□ 0.18
CHD1L-210ENST00000622533 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
CHD1L-210ENST00000622533 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
CHD1L-210ENST00000622533 STK26Q9P289 416 aa16.15■□□□□ 0.18
CHD1L-210ENST00000622533 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
CHD1L-210ENST00000622533 TMEM131LA2VDJ0 1609 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 KIF2CQ99661 725 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
CHD1L-210ENST00000622533 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
CHD1L-210ENST00000622533 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
CHD1L-210ENST00000622533 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.12■□□□□ 0.17
CHD1L-210ENST00000622533 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
CHD1L-210ENST00000622533 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
CHD1L-210ENST00000622533 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
CHD1L-210ENST00000622533 CAVIN1Q6NZI2 390 aaKnown RBP16.11■□□□□ 0.17
CHD1L-210ENST00000622533 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
CHD1L-210ENST00000622533 GOLGA6L22H0YM25 854 aa16.11■□□□□ 0.17
CHD1L-210ENST00000622533 PREX1Q8TCU6 1659 aa16.11■□□□□ 0.17
CHD1L-210ENST00000622533 AK9Q5TCS8 1911 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 ATP7BP35670 1465 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
CHD1L-210ENST00000622533 TERF1P54274 439 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 GNAI1P63096 354 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 NFE2L2Q16236 605 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 RBSNQ9H1K0 784 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 CDK19Q9BWU1 502 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
CHD1L-210ENST00000622533 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-210ENST00000622533 ZBTB7BO15156 539 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-210ENST00000622533 PRKAR2BP31323 418 aa16.09■□□□□ 0.17
CHD1L-210ENST00000622533 MCTP1Q6DN14 999 aa16.09■□□□□ 0.17
CHD1L-210ENST00000622533 NOL7Q9UMY1 257 aaKnown RBP16.09■□□□□ 0.17
CHD1L-210ENST00000622533 LMOD3Q0VAK6 560 aa16.08■□□□□ 0.17
CHD1L-210ENST00000622533 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.17
CHD1L-210ENST00000622533 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
CHD1L-210ENST00000622533 DLC1Q96QB1 1528 aa16.08■□□□□ 0.16
CHD1L-210ENST00000622533 ALKQ9UM73 1620 aa16.08■□□□□ 0.16
CHD1L-210ENST00000622533 ANKRD45Q5TZF3 282 aa16.08■□□□□ 0.16
CHD1L-210ENST00000622533 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
CHD1L-210ENST00000622533 VAMP4O75379 141 aa16.07■□□□□ 0.16
CHD1L-210ENST00000622533 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
CHD1L-210ENST00000622533 ZNF500O60304 480 aaPredicted RBP16.07■□□□□ 0.16
CHD1L-210ENST00000622533 RAPGEF3O95398 923 aa16.07■□□□□ 0.16
CHD1L-210ENST00000622533 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
CHD1L-210ENST00000622533 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
CHD1L-210ENST00000622533 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
CHD1L-210ENST00000622533 ABCC4O15439 1325 aa16.06■□□□□ 0.16
CHD1L-210ENST00000622533 SMAP1Q8IYB5 467 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-210ENST00000622533 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-210ENST00000622533 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
CHD1L-210ENST00000622533 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
CHD1L-210ENST00000622533 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
CHD1L-210ENST00000622533 ZNF445P59923 1031 aa16.04■□□□□ 0.16
CHD1L-210ENST00000622533 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
CHD1L-210ENST00000622533 CDK12Q9NYV4 1490 aaPredicted RBP16.04■□□□□ 0.16
CHD1L-210ENST00000622533 CDC45O75419 566 aa16.03■□□□□ 0.16
CHD1L-210ENST00000622533 PKP1Q13835 747 aa16.03■□□□□ 0.16
CHD1L-210ENST00000622533 ZKSCAN5Q9Y2L8 839 aa16.03■□□□□ 0.16
CHD1L-210ENST00000622533 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-210ENST00000622533 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
CHD1L-210ENST00000622533 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
CHD1L-210ENST00000622533 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-210ENST00000622533 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
CHD1L-210ENST00000622533 HS1BP3Q53T59 392 aa16.02■□□□□ 0.16
CHD1L-210ENST00000622533 PDLIM2Q96JY6 352 aa16.02■□□□□ 0.16
CHD1L-210ENST00000622533 AATKQ6ZMQ8 1374 aa16.02■□□□□ 0.16
CHD1L-210ENST00000622533 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.16
CHD1L-210ENST00000622533 TSC1Q92574 1164 aa16.02■□□□□ 0.15
CHD1L-210ENST00000622533 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
CHD1L-210ENST00000622533 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
CHD1L-210ENST00000622533 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-210ENST00000622533 CLEC17AQ6ZS10 378 aa16.01■□□□□ 0.15
CHD1L-210ENST00000622533 PRPF40AO75400 957 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms