RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 A2MP01023 1474 aa8.06□□□□□ -1.12
SRSF4-207ENST00000622143 NPHP4O75161 1426 aaPredicted RBP8.06□□□□□ -1.12
SRSF4-207ENST00000622143 NLRP7Q8WX94 980 aa8.06□□□□□ -1.12
SRSF4-207ENST00000622143 ZNF516Q92618 1163 aa8.06□□□□□ -1.12
SRSF4-207ENST00000622143 LRRC7Q96NW7 1537 aa8.06□□□□□ -1.12
SRSF4-207ENST00000622143 TNRQ92752 1358 aa8.06□□□□□ -1.12
SRSF4-207ENST00000622143 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
SRSF4-207ENST00000622143 PDE4DQ08499 809 aa8.05□□□□□ -1.12
SRSF4-207ENST00000622143 ARHGAP35Q9NRY4 1499 aa8.05□□□□□ -1.12
SRSF4-207ENST00000622143 PLXNC1O60486 1568 aa8.05□□□□□ -1.12
SRSF4-207ENST00000622143 FMN1Q68DA7 1419 aa8.04□□□□□ -1.12
SRSF4-207ENST00000622143 CFHP08603 1231 aa8.04□□□□□ -1.12
SRSF4-207ENST00000622143 UBTFP17480 764 aaKnown RBP8.04□□□□□ -1.12
SRSF4-207ENST00000622143 ANKLE2Q86XL3 938 aa8.04□□□□□ -1.12
SRSF4-207ENST00000622143 PRR14Q9BWN1 585 aa8.04□□□□□ -1.12
SRSF4-207ENST00000622143 GPBP1L1Q9HC44 474 aaPredicted RBP8.04□□□□□ -1.12
SRSF4-207ENST00000622143 INO80Q9ULG1 1556 aaPredicted RBP8.04□□□□□ -1.12
SRSF4-207ENST00000622143 IQGAP1P46940 1657 aa8.04□□□□□ -1.12
SRSF4-207ENST00000622143 TTLL12Q14166 644 aaPredicted RBP8.03□□□□□ -1.12
SRSF4-207ENST00000622143 AMHR2Q16671 573 aa8.03□□□□□ -1.12
SRSF4-207ENST00000622143 TRIM52Q96A61 297 aa8.03□□□□□ -1.12
SRSF4-207ENST00000622143 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
SRSF4-207ENST00000622143 COPS2P61201 443 aa8.02□□□□□ -1.13
SRSF4-207ENST00000622143 BLOC1S3Q6QNY0 202 aa8.02□□□□□ -1.13
SRSF4-207ENST00000622143 PARP9Q8IXQ6 854 aa8.02□□□□□ -1.13
SRSF4-207ENST00000622143 SYNMO15061 1565 aa8.01□□□□□ -1.13
SRSF4-207ENST00000622143 UGGT1Q9NYU2 1555 aa8.01□□□□□ -1.13
SRSF4-207ENST00000622143 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
SRSF4-207ENST00000622143 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
SRSF4-207ENST00000622143 FAM135AQ9P2D6 1515 aa8□□□□□ -1.13
SRSF4-207ENST00000622143 ZPR1O75312 459 aa8□□□□□ -1.13
SRSF4-207ENST00000622143 MDM2Q00987 491 aaPredicted RBP8□□□□□ -1.13
SRSF4-207ENST00000622143 KMT5BQ4FZB7 885 aa8□□□□□ -1.13
SRSF4-207ENST00000622143 ZNF787Q6DD87 383 aa8□□□□□ -1.13
SRSF4-207ENST00000622143 ADGBQ8N7X0 1667 aa7.99□□□□□ -1.13
SRSF4-207ENST00000622143 XIRP1Q702N8 1843 aaKnown RBP7.99□□□□□ -1.13
SRSF4-207ENST00000622143 KIF3BO15066 747 aa7.99□□□□□ -1.13
SRSF4-207ENST00000622143 RSPH4AQ5TD94 716 aa7.99□□□□□ -1.13
SRSF4-207ENST00000622143 THEMISQ8N1K5 641 aaPredicted RBP7.99□□□□□ -1.13
SRSF4-207ENST00000622143 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
SRSF4-207ENST00000622143 PZPP20742 1482 aa7.99□□□□□ -1.13
SRSF4-207ENST00000622143 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
SRSF4-207ENST00000622143 ROBO1Q9Y6N7 1651 aa7.98□□□□□ -1.13
SRSF4-207ENST00000622143 GPATCH8Q9UKJ3 1502 aaKnown RBP7.98□□□□□ -1.13
SRSF4-207ENST00000622143 RDH13Q8NBN7 331 aa7.98□□□□□ -1.13
SRSF4-207ENST00000622143 DEPDC5O75140 1603 aa7.98□□□□□ -1.13
SRSF4-207ENST00000622143 MED14O60244 1454 aa7.98□□□□□ -1.13
SRSF4-207ENST00000622143 WASHC2CQ9Y4E1 1318 aa7.98□□□□□ -1.13
SRSF4-207ENST00000622143 KDM5DQ9BY66 1539 aa7.98□□□□□ -1.13
SRSF4-207ENST00000622143 MIA2Q96PC5 1412 aa7.97□□□□□ -1.13
SRSF4-207ENST00000622143 DDX11L8A8MPP1 907 aa7.97□□□□□ -1.13
SRSF4-207ENST00000622143 CLCN1P35523 988 aa7.97□□□□□ -1.13
SRSF4-207ENST00000622143 PPP1R18Q6NYC8 613 aa7.97□□□□□ -1.13
SRSF4-207ENST00000622143 GIGYF2Q6Y7W6 1299 aaKnown RBP7.97□□□□□ -1.13
SRSF4-207ENST00000622143 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
SRSF4-207ENST00000622143 CFDP1Q9UEE9 299 aaPredicted RBP7.97□□□□□ -1.13
SRSF4-207ENST00000622143 ZC3H13Q5T200 1668 aaKnown RBP7.97□□□□□ -1.13
SRSF4-207ENST00000622143 EEA1Q15075 1411 aa7.96□□□□□ -1.13
SRSF4-207ENST00000622143 TLL1O43897 1013 aa7.96□□□□□ -1.14
SRSF4-207ENST00000622143 GCGRP47871 477 aa7.96□□□□□ -1.14
SRSF4-207ENST00000622143 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
SRSF4-207ENST00000622143 GPCPD1Q9NPB8 672 aa7.96□□□□□ -1.14
SRSF4-207ENST00000622143 CCDC18Q5T9S5 1454 aa7.95□□□□□ -1.14
SRSF4-207ENST00000622143 NLRP1Q9C000 1473 aa7.95□□□□□ -1.14
SRSF4-207ENST00000622143 MEX3CQ5U5Q3 659 aaKnown RBP7.95□□□□□ -1.14
SRSF4-207ENST00000622143 SULF1Q8IWU6 871 aa7.95□□□□□ -1.14
SRSF4-207ENST00000622143 CCNB3Q8WWL7 1395 aa7.95□□□□□ -1.14
SRSF4-207ENST00000622143 LRP6O75581 1613 aa7.94□□□□□ -1.14
SRSF4-207ENST00000622143 CD46P15529 392 aa7.94□□□□□ -1.14
SRSF4-207ENST00000622143 PHLPP1O60346 1717 aa7.94□□□□□ -1.14
SRSF4-207ENST00000622143 TMEM94Q12767 1356 aa7.94□□□□□ -1.14
SRSF4-207ENST00000622143 DHX29Q7Z478 1369 aaKnown RBP7.94□□□□□ -1.14
SRSF4-207ENST00000622143 CASKIN1Q8WXD9 1431 aa7.94□□□□□ -1.14
SRSF4-207ENST00000622143 GFRA3O60609 400 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 LTKP29376 864 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 FUT2Q10981 343 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
SRSF4-207ENST00000622143 MORN1Q5T089 497 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.93□□□□□ -1.14
SRSF4-207ENST00000622143 FAM135BQ49AJ0 1406 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 KIAA1107Q9UPP5 1409 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 PLEKHH2Q8IVE3 1493 aa7.93□□□□□ -1.14
SRSF4-207ENST00000622143 SCAF11Q99590 1463 aaKnown RBP7.93□□□□□ -1.14
SRSF4-207ENST00000622143 NR1I2O75469 434 aa7.92□□□□□ -1.14
SRSF4-207ENST00000622143 MS4A1P11836 297 aa7.92□□□□□ -1.14
SRSF4-207ENST00000622143 TXNDC2Q86VQ3 553 aa7.92□□□□□ -1.14
SRSF4-207ENST00000622143 SCUBE3Q8IX30 993 aa7.92□□□□□ -1.14
SRSF4-207ENST00000622143 FAM217BQ9NTX9 383 aaPredicted RBP7.92□□□□□ -1.14
SRSF4-207ENST00000622143 NUTM2BA6NNL0 878 aaPredicted RBP7.91□□□□□ -1.14
SRSF4-207ENST00000622143 NUTM2EB1AL46 878 aaPredicted RBP7.91□□□□□ -1.14
SRSF4-207ENST00000622143 PROSER2Q86WR7 435 aaPredicted RBP7.91□□□□□ -1.14
SRSF4-207ENST00000622143 NUTM2AQ8IVF1 878 aaPredicted RBP7.91□□□□□ -1.14
SRSF4-207ENST00000622143 THAP11Q96EK4 314 aa7.91□□□□□ -1.14
SRSF4-207ENST00000622143 FAM117AQ9C073 453 aa7.91□□□□□ -1.14
SRSF4-207ENST00000622143 ERVK-7P63135 1459 aa7.91□□□□□ -1.14
SRSF4-207ENST00000622143 MAP3K1Q13233 1512 aa7.91□□□□□ -1.14
SRSF4-207ENST00000622143 UBR1Q8IWV7 1749 aa7.91□□□□□ -1.14
SRSF4-207ENST00000622143 CFAP65Q6ZU64 1925 aaKnown RBP7.9□□□□□ -1.14
SRSF4-207ENST00000622143 TIAM1Q13009 1591 aa7.9□□□□□ -1.14
SRSF4-207ENST00000622143 NCOA2Q15596 1464 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms