RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 LRPPRCP42704 1394 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-211ENST00000621271 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 FOXO3O43524 673 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 ZFYVE27Q5T4F4 411 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 EXOC5O00471 708 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 KDM4AO75164 1064 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 KRT18P05783 430 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 RRS1Q15050 365 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 SIL1Q9H173 461 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
CLTCL1-211ENST00000621271 TTLL12Q14166 644 aaPredicted RBP11.72□□□□□ -0.53
CLTCL1-211ENST00000621271 NBPF1Q3BBV0 1214 aa11.72□□□□□ -0.53
CLTCL1-211ENST00000621271 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
CLTCL1-211ENST00000621271 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
CLTCL1-211ENST00000621271 CCT4P50991 539 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-211ENST00000621271 TXLNAP40222 546 aa11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 AMOTL2Q9Y2J4 779 aa11.71□□□□□ -0.53
CLTCL1-211ENST00000621271 CDC45O75419 566 aa11.71□□□□□ -0.54
CLTCL1-211ENST00000621271 PPP2R1AP30153 589 aa11.71□□□□□ -0.54
CLTCL1-211ENST00000621271 SOGA3Q5TF21 947 aa11.71□□□□□ -0.54
CLTCL1-211ENST00000621271 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.54
CLTCL1-211ENST00000621271 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.54
CLTCL1-211ENST00000621271 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
CLTCL1-211ENST00000621271 NAP1L1P55209 391 aaKnown RBP11.7□□□□□ -0.54
CLTCL1-211ENST00000621271 MPRIPQ6WCQ1 1025 aa11.7□□□□□ -0.54
CLTCL1-211ENST00000621271 PANK1Q8TE04 598 aa11.7□□□□□ -0.54
CLTCL1-211ENST00000621271 LRP2BPQ9P2M1 347 aa11.7□□□□□ -0.54
CLTCL1-211ENST00000621271 EPRSP07814 1512 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 FKBP4Q02790 459 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 SASS6Q6UVJ0 657 aa11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 AK7Q96M32 723 aa11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 AKNAQ7Z591 1439 aa11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 RPGRQ92834 1020 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-211ENST00000621271 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 TRIM22Q8IYM9 498 aa11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 WAPLQ7Z5K2 1190 aa11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 KIAA1107Q9UPP5 1409 aa11.68□□□□□ -0.54
CLTCL1-211ENST00000621271 TDO2P48775 406 aa11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 AMOTQ4VCS5 1084 aa11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 CAVIN4Q5BKX8 364 aa11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 CRACR2BQ8N4Y2 399 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 CCDC69A6NI79 296 aa11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 ABCF2Q9UG63 623 aa11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-211ENST00000621271 RDXP35241 583 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 ADGRL1O94910 1474 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 ZNF287Q9HBT7 754 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 CEP170Q5SW79 1584 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 MSH6P52701 1360 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 NUCB2P80303 420 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 BRPF3Q9ULD4 1205 aa11.66□□□□□ -0.54
CLTCL1-211ENST00000621271 SYCP1Q15431 976 aa11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 METTL24Q5JXM2 366 aa11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 UBAC1Q9BSL1 405 aa11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 ABCC2Q92887 1545 aa11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 IFIT1P09914 478 aaKnown RBP11.65□□□□□ -0.54
CLTCL1-211ENST00000621271 ZNF76P36508 570 aa11.65□□□□□ -0.55
CLTCL1-211ENST00000621271 WDR78Q5VTH9 848 aa11.65□□□□□ -0.55
CLTCL1-211ENST00000621271 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.65□□□□□ -0.55
CLTCL1-211ENST00000621271 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.55
CLTCL1-211ENST00000621271 HECW1Q76N89 1606 aa11.65□□□□□ -0.55
CLTCL1-211ENST00000621271 DENND4BO75064 1496 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 IDH1O75874 414 aaKnown RBP11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 IBSPP21815 317 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 MRE11P49959 708 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 FCHSD2O94868 740 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 AACSQ86V21 672 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 PDCL3Q9H2J4 239 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 ZHX3Q9H4I2 956 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 PDCP20941 246 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms