RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 RSPH6AQ9H0K4 717 aa21.77■■□□□ 1.08
PCGF3-213ENST00000620529 USP19O94966 1318 aa21.77■■□□□ 1.08
PCGF3-213ENST00000620529 PRKAR2BP31323 418 aa21.77■■□□□ 1.08
PCGF3-213ENST00000620529 NCBP3Q53F19 620 aaKnown RBP21.77■■□□□ 1.08
PCGF3-213ENST00000620529 CDCA7LQ96GN5 454 aa21.77■■□□□ 1.08
PCGF3-213ENST00000620529 RRP7AQ9Y3A4 280 aaKnown RBP21.77■■□□□ 1.08
PCGF3-213ENST00000620529 HOXC9P31274 260 aa21.76■■□□□ 1.07
PCGF3-213ENST00000620529 RGPD1P0DJD0 1748 aa21.76■■□□□ 1.07
PCGF3-213ENST00000620529 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
PCGF3-213ENST00000620529 GCP02774 474 aa21.75■■□□□ 1.07
PCGF3-213ENST00000620529 NEFLP07196 543 aa21.75■■□□□ 1.07
PCGF3-213ENST00000620529 ARHGEF10O15013 1369 aa21.75■■□□□ 1.07
PCGF3-213ENST00000620529 PLEKHG5O94827 1062 aa21.75■■□□□ 1.07
PCGF3-213ENST00000620529 SUPT16HQ9Y5B9 1047 aaKnown RBP21.75■■□□□ 1.07
PCGF3-213ENST00000620529 CCDC27Q2M243 656 aa21.74■■□□□ 1.07
PCGF3-213ENST00000620529 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
PCGF3-213ENST00000620529 ZBTB7CA1YPR0 619 aa21.73■■□□□ 1.07
PCGF3-213ENST00000620529 TMPOP42166 694 aaKnown RBP21.73■■□□□ 1.07
PCGF3-213ENST00000620529 SPATA31A3Q5VYP0 1347 aa21.72■■□□□ 1.07
PCGF3-213ENST00000620529 NHSL1Q5SYE7 1610 aa21.72■■□□□ 1.07
PCGF3-213ENST00000620529 IP6K1Q92551 441 aa21.71■■□□□ 1.07
PCGF3-213ENST00000620529 MED1Q15648 1581 aaPredicted RBP21.71■■□□□ 1.07
PCGF3-213ENST00000620529 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
PCGF3-213ENST00000620529 E9PSI1 815 aa21.7■■□□□ 1.06
PCGF3-213ENST00000620529 SOS2Q07890 1332 aaPredicted RBP21.7■■□□□ 1.06
PCGF3-213ENST00000620529 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
PCGF3-213ENST00000620529 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
PCGF3-213ENST00000620529 ARHGEF25Q86VW2 580 aa21.69■■□□□ 1.06
PCGF3-213ENST00000620529 WDR63Q8IWG1 891 aa21.69■■□□□ 1.06
PCGF3-213ENST00000620529 RIPK4P57078 832 aa21.68■■□□□ 1.06
PCGF3-213ENST00000620529 CRYBG1Q9Y4K1 1723 aa21.68■■□□□ 1.06
PCGF3-213ENST00000620529 IGSF1Q8N6C5 1336 aa21.67■■□□□ 1.06
PCGF3-213ENST00000620529 DUSP27Q5VZP5 1158 aa21.66■■□□□ 1.06
PCGF3-213ENST00000620529 AEBP1Q8IUX7 1158 aa21.66■■□□□ 1.06
PCGF3-213ENST00000620529 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
PCGF3-213ENST00000620529 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
PCGF3-213ENST00000620529 ROBO1Q9Y6N7 1651 aa21.66■■□□□ 1.06
PCGF3-213ENST00000620529 NFE2L2Q16236 605 aa21.66■■□□□ 1.06
PCGF3-213ENST00000620529 EYA1Q99502 592 aa21.66■■□□□ 1.06
PCGF3-213ENST00000620529 PHACTR3Q96KR7 559 aa21.65■■□□□ 1.06
PCGF3-213ENST00000620529 ZC3H6P61129 1189 aaKnown RBP21.64■■□□□ 1.05
PCGF3-213ENST00000620529 RCAN3Q9UKA8 241 aa21.64■■□□□ 1.05
PCGF3-213ENST00000620529 KDRP35968 1356 aa21.63■■□□□ 1.05
PCGF3-213ENST00000620529 RGPD5Q99666 1765 aa21.63■■□□□ 1.05
PCGF3-213ENST00000620529 TRMT2AQ8IZ69 625 aaKnown RBP21.63■■□□□ 1.05
PCGF3-213ENST00000620529 LMOD3Q0VAK6 560 aa21.62■■□□□ 1.05
PCGF3-213ENST00000620529 FKBP8Q14318 412 aa21.62■■□□□ 1.05
PCGF3-213ENST00000620529 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
PCGF3-213ENST00000620529 TRIM35Q9UPQ4 493 aa21.62■■□□□ 1.05
PCGF3-213ENST00000620529 CABLES1Q8TDN4 633 aa21.62■■□□□ 1.05
PCGF3-213ENST00000620529 RGPD2P0DJD1 1756 aa21.6■■□□□ 1.05
PCGF3-213ENST00000620529 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
PCGF3-213ENST00000620529 HAP1P54257 671 aaPredicted RBP21.6■■□□□ 1.05
PCGF3-213ENST00000620529 ABCC6O95255 1503 aa21.59■■□□□ 1.05
PCGF3-213ENST00000620529 ABCA3Q99758 1704 aa21.59■■□□□ 1.05
PCGF3-213ENST00000620529 AHDC1Q5TGY3 1603 aaPredicted RBP21.59■■□□□ 1.05
PCGF3-213ENST00000620529 IL16Q14005 1332 aa21.59■■□□□ 1.05
PCGF3-213ENST00000620529 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.04
PCGF3-213ENST00000620529 ANKRD24Q8TF21 1146 aa21.58■■□□□ 1.04
PCGF3-213ENST00000620529 COL18A1P39060 1754 aa21.57■■□□□ 1.04
PCGF3-213ENST00000620529 CPDO75976 1380 aa21.56■■□□□ 1.04
PCGF3-213ENST00000620529 TOM1O60784 492 aa21.56■■□□□ 1.04
PCGF3-213ENST00000620529 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
PCGF3-213ENST00000620529 LRRC59Q96AG4 307 aaKnown RBP21.55■■□□□ 1.04
PCGF3-213ENST00000620529 AXIN2Q9Y2T1 843 aa21.55■■□□□ 1.04
PCGF3-213ENST00000620529 KIAA0232Q92628 1395 aa21.55■■□□□ 1.04
PCGF3-213ENST00000620529 FAM208AQ9UK61 1670 aaKnown RBP21.54■■□□□ 1.04
PCGF3-213ENST00000620529 NBPF6Q5VWK0 638 aa21.54■■□□□ 1.04
PCGF3-213ENST00000620529 USHBP1Q8N6Y0 703 aa21.54■■□□□ 1.04
PCGF3-213ENST00000620529 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
PCGF3-213ENST00000620529 NBPF4Q96M43 638 aa21.54■■□□□ 1.04
PCGF3-213ENST00000620529 CAMTA1Q9Y6Y1 1673 aa21.54■■□□□ 1.04
PCGF3-213ENST00000620529 ERBB3P21860 1342 aa21.53■■□□□ 1.04
PCGF3-213ENST00000620529 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
PCGF3-213ENST00000620529 PHLPP1O60346 1717 aa21.53■■□□□ 1.04
PCGF3-213ENST00000620529 RRP1P56182 461 aaKnown RBP21.52■■□□□ 1.03
PCGF3-213ENST00000620529 CHRNA2Q15822 529 aa21.52■■□□□ 1.03
PCGF3-213ENST00000620529 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
PCGF3-213ENST00000620529 PRDM11Q9NQV5 511 aa21.51■■□□□ 1.03
PCGF3-213ENST00000620529 FANCIQ9NVI1 1328 aa21.5■■□□□ 1.03
PCGF3-213ENST00000620529 NCAPD2Q15021 1401 aa21.5■■□□□ 1.03
PCGF3-213ENST00000620529 RTF1Q92541 710 aaKnown RBP21.49■■□□□ 1.03
PCGF3-213ENST00000620529 CSB-PGBD3P0DP91 1061 aa21.49■■□□□ 1.03
PCGF3-213ENST00000620529 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
PCGF3-213ENST00000620529 FAM83GA6ND36 823 aa21.48■■□□□ 1.03
PCGF3-213ENST00000620529 GNAI1P63096 354 aa21.48■■□□□ 1.03
PCGF3-213ENST00000620529 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
PCGF3-213ENST00000620529 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
PCGF3-213ENST00000620529 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
PCGF3-213ENST00000620529 LAS1LQ9Y4W2 734 aaKnown RBP21.48■■□□□ 1.03
PCGF3-213ENST00000620529 LMO7Q8WWI1 1683 aa21.48■■□□□ 1.03
PCGF3-213ENST00000620529 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
PCGF3-213ENST00000620529 IFT57Q9NWB7 429 aa21.47■■□□□ 1.03
PCGF3-213ENST00000620529 DCTN1Q14203 1278 aa21.46■■□□□ 1.03
PCGF3-213ENST00000620529 NLRP2Q9NX02 1062 aa21.46■■□□□ 1.03
PCGF3-213ENST00000620529 UBAP1LF5GYI3 381 aa21.45■■□□□ 1.02
PCGF3-213ENST00000620529 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.45■■□□□ 1.02
PCGF3-213ENST00000620529 COL16A1Q07092 1604 aaPredicted RBP21.45■■□□□ 1.02
PCGF3-213ENST00000620529 HTATSF1O43719 755 aaKnown RBP21.45■■□□□ 1.02
PCGF3-213ENST00000620529 CT47B1P0C2W7 299 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms