RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 HSP90AB2PQ58FF8 381 aa24.08■■□□□ 1.45
FGFR1-241ENST00000619564 AK7Q96M32 723 aa24.08■■□□□ 1.45
FGFR1-241ENST00000619564 RBM5P52756 815 aaKnown RBP eCLIP24.08■■□□□ 1.45
FGFR1-241ENST00000619564 FILIP1LQ4L180 1135 aa24.08■■□□□ 1.45
FGFR1-241ENST00000619564 TEX35Q5T0J7 233 aa24.08■■□□□ 1.45
FGFR1-241ENST00000619564 ARGLU1Q9NWB6 273 aaPredicted RBP24.08■■□□□ 1.45
FGFR1-241ENST00000619564 ANKRD1Q15327 319 aa24.08■■□□□ 1.44
FGFR1-241ENST00000619564 ACBD3Q9H3P7 528 aa24.08■■□□□ 1.44
FGFR1-241ENST00000619564 MBD3O95983 291 aa24.07■■□□□ 1.44
FGFR1-241ENST00000619564 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
FGFR1-241ENST00000619564 JMYQ8N9B5 988 aa24.07■■□□□ 1.44
FGFR1-241ENST00000619564 FBXO3Q9UK99 471 aa24.07■■□□□ 1.44
FGFR1-241ENST00000619564 RDXP35241 583 aaKnown RBP24.07■■□□□ 1.44
FGFR1-241ENST00000619564 PIP4K2AP48426 406 aaPredicted RBP24.07■■□□□ 1.44
FGFR1-241ENST00000619564 CCDC69A6NI79 296 aa24.06■■□□□ 1.44
FGFR1-241ENST00000619564 XPCQ01831 940 aaPredicted RBP24.06■■□□□ 1.44
FGFR1-241ENST00000619564 KCNH5Q8NCM2 988 aa24.06■■□□□ 1.44
FGFR1-241ENST00000619564 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
FGFR1-241ENST00000619564 PATL2C9JE40 543 aaKnown RBP24.05■■□□□ 1.44
FGFR1-241ENST00000619564 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.05■■□□□ 1.44
FGFR1-241ENST00000619564 ATF7IPQ6VMQ6 1270 aa24.05■■□□□ 1.44
FGFR1-241ENST00000619564 CEP126Q9P2H0 1117 aa24.05■■□□□ 1.44
FGFR1-241ENST00000619564 BCAR3O75815 825 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 SOGA3Q5TF21 947 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 ZC3H6P61129 1189 aaKnown RBP24.04■■□□□ 1.44
FGFR1-241ENST00000619564 ZNF428Q96B54 188 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 FCHSD2O94868 740 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 FKBP4Q02790 459 aaKnown RBP eCLIP24.04■■□□□ 1.44
FGFR1-241ENST00000619564 AACSQ86V21 672 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 STK11IPQ8N1F8 1099 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 CAGE1Q8TC20 777 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 SMARCE1Q969G3 411 aa24.04■■□□□ 1.44
FGFR1-241ENST00000619564 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
FGFR1-241ENST00000619564 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
FGFR1-241ENST00000619564 TRIM5Q9C035 493 aa24.03■■□□□ 1.44
FGFR1-241ENST00000619564 SRGAP3O43295 1099 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 SYCP1Q15431 976 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 CCDC39Q9UFE4 941 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 SMC2O95347 1197 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 DAPK1P53355 1430 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 CCDC61Q9Y6R9 512 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 STARD3NLO95772 234 aa24.02■■□□□ 1.44
FGFR1-241ENST00000619564 AEBP1Q8IUX7 1158 aa24.01■■□□□ 1.43
FGFR1-241ENST00000619564 RNF214Q8ND24 703 aa24.01■■□□□ 1.43
FGFR1-241ENST00000619564 IGHMBP2P38935 993 aaKnown RBP24.01■■□□□ 1.43
FGFR1-241ENST00000619564 NASPP49321 788 aaPredicted RBP24.01■■□□□ 1.43
FGFR1-241ENST00000619564 CEBPZQ03701 1054 aaKnown RBP24■■□□□ 1.43
FGFR1-241ENST00000619564 NUP133Q8WUM0 1156 aa24■■□□□ 1.43
FGFR1-241ENST00000619564 GNAT3A8MTJ3 354 aa24■■□□□ 1.43
FGFR1-241ENST00000619564 FIBPO43427 364 aa24■■□□□ 1.43
FGFR1-241ENST00000619564 ZNF771Q7L3S4 317 aaPredicted RBP24■■□□□ 1.43
FGFR1-241ENST00000619564 FMNL2Q96PY5 1086 aa24■■□□□ 1.43
FGFR1-241ENST00000619564 STK3Q13188 491 aa24■■□□□ 1.43
FGFR1-241ENST00000619564 ZSCAN29Q8IWY8 852 aaPredicted RBP24■■□□□ 1.43
FGFR1-241ENST00000619564 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 MAP4K4O95819 1239 aaPredicted RBP23.99■■□□□ 1.43
FGFR1-241ENST00000619564 MVPQ14764 893 aaKnown RBP23.99■■□□□ 1.43
FGFR1-241ENST00000619564 BICDL1Q6ZP65 573 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
FGFR1-241ENST00000619564 RAI14Q9P0K7 980 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 CTNNA3Q9UI47 895 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 MYO6Q9UM54 1294 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 MRE11P49959 708 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 HSP90B2PQ58FF3 399 aa23.99■■□□□ 1.43
FGFR1-241ENST00000619564 CAVIN1Q6NZI2 390 aaKnown RBP23.99■■□□□ 1.43
FGFR1-241ENST00000619564 NFKBIBQ15653 356 aa23.98■■□□□ 1.43
FGFR1-241ENST00000619564 FAM43AQ8N2R8 423 aa23.98■■□□□ 1.43
FGFR1-241ENST00000619564 TDO2P48775 406 aa23.98■■□□□ 1.43
FGFR1-241ENST00000619564 TTLL5Q6EMB2 1281 aa23.98■■□□□ 1.43
FGFR1-241ENST00000619564 PRPF40AO75400 957 aaKnown RBP23.97■■□□□ 1.43
FGFR1-241ENST00000619564 NFE2L2Q16236 605 aa23.97■■□□□ 1.43
FGFR1-241ENST00000619564 NOL7Q9UMY1 257 aaKnown RBP23.97■■□□□ 1.43
FGFR1-241ENST00000619564 BRPF1P55201 1214 aaPredicted RBP23.97■■□□□ 1.43
FGFR1-241ENST00000619564 PAF1Q8N7H5 531 aa23.97■■□□□ 1.43
FGFR1-241ENST00000619564 TSPY26PQ9H489 355 aa23.97■■□□□ 1.43
FGFR1-241ENST00000619564 UBAC1Q9BSL1 405 aa23.97■■□□□ 1.43
FGFR1-241ENST00000619564 CDKL5O76039 1030 aa23.96■■□□□ 1.43
FGFR1-241ENST00000619564 STIM1Q13586 685 aa23.96■■□□□ 1.43
FGFR1-241ENST00000619564 LRP2BPQ9P2M1 347 aa23.96■■□□□ 1.43
FGFR1-241ENST00000619564 ZNF652Q9Y2D9 606 aa23.95■■□□□ 1.42
FGFR1-241ENST00000619564 TRAK2O60296 914 aa23.95■■□□□ 1.42
FGFR1-241ENST00000619564 BLOC1S2Q6QNY1 142 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 ZHX3Q9H4I2 956 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 CCP110O43303 1012 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 DACH1Q9UI36 760 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 NSD3Q9BZ95 1437 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 FAM13BQ9NYF5 915 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 CHD1LQ86WJ1 897 aa23.94■■□□□ 1.42
FGFR1-241ENST00000619564 ZNHIT6Q9NWK9 470 aaKnown RBP23.93■■□□□ 1.42
FGFR1-241ENST00000619564 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
FGFR1-241ENST00000619564 TMOD3Q9NYL9 352 aa23.93■■□□□ 1.42
FGFR1-241ENST00000619564 TMOD2Q9NZR1 351 aa23.93■■□□□ 1.42
FGFR1-241ENST00000619564 RPAP2Q8IXW5 612 aaPredicted RBP23.93■■□□□ 1.42
FGFR1-241ENST00000619564 WDR33Q9C0J8 1336 aaKnown RBP23.92■■□□□ 1.42
FGFR1-241ENST00000619564 ME1P48163 572 aa23.92■■□□□ 1.42
FGFR1-241ENST00000619564 PDCL3Q9H2J4 239 aa23.92■■□□□ 1.42
FGFR1-241ENST00000619564 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
FGFR1-241ENST00000619564 ERCC4Q92889 916 aaPredicted RBP23.92■■□□□ 1.42
FGFR1-241ENST00000619564 KRT32Q14532 448 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms