RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 THSD7AQ9UPZ6 1657 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 FYB1O15117 783 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 SOX12O15370 315 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 KRT27Q7Z3Y8 459 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 COG3Q96JB2 828 aa21.48■■□□□ 1.03
SRGAP2C-205ENST00000617209 CRB1P82279 1406 aa21.47■■□□□ 1.03
SRGAP2C-205ENST00000617209 CARD14Q9BXL6 1004 aa21.47■■□□□ 1.03
SRGAP2C-205ENST00000617209 LTN1O94822 1766 aa21.46■■□□□ 1.03
SRGAP2C-205ENST00000617209 TCP11L2Q8N4U5 519 aa21.46■■□□□ 1.03
SRGAP2C-205ENST00000617209 WDR17Q8IZU2 1322 aa21.45■■□□□ 1.02
SRGAP2C-205ENST00000617209 EP400Q96L91 3159 aa21.44■■□□□ 1.02
SRGAP2C-205ENST00000617209 A0A0G2JS52 829 aa21.44■■□□□ 1.02
SRGAP2C-205ENST00000617209 MYT1Q01538 1121 aa21.44■■□□□ 1.02
SRGAP2C-205ENST00000617209 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
SRGAP2C-205ENST00000617209 C11orf95C9JLR9 678 aaPredicted RBP21.42■■□□□ 1.02
SRGAP2C-205ENST00000617209 KIF20BQ96Q89 1820 aa21.41■■□□□ 1.02
SRGAP2C-205ENST00000617209 TOM1L2Q6ZVM7 507 aa21.41■■□□□ 1.02
SRGAP2C-205ENST00000617209 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
SRGAP2C-205ENST00000617209 GGNBP2Q9H3C7 697 aa21.41■■□□□ 1.02
SRGAP2C-205ENST00000617209 IP6K1Q92551 441 aa21.4■■□□□ 1.02
SRGAP2C-205ENST00000617209 NSD3Q9BZ95 1437 aa21.39■■□□□ 1.02
SRGAP2C-205ENST00000617209 POLR3GLQ9BT43 218 aa21.39■■□□□ 1.01
SRGAP2C-205ENST00000617209 BLMP54132 1417 aaPredicted RBP21.38■■□□□ 1.01
SRGAP2C-205ENST00000617209 PARP4Q9UKK3 1724 aaKnown RBP21.38■■□□□ 1.01
SRGAP2C-205ENST00000617209 ERBB3P21860 1342 aa21.37■■□□□ 1.01
SRGAP2C-205ENST00000617209 CSB-PGBD3P0DP91 1061 aa21.37■■□□□ 1.01
SRGAP2C-205ENST00000617209 CDCA7Q9BWT1 371 aaPredicted RBP21.37■■□□□ 1.01
SRGAP2C-205ENST00000617209 CGNL1Q0VF96 1302 aa21.36■■□□□ 1.01
SRGAP2C-205ENST00000617209 MAP3K19Q56UN5 1328 aa21.36■■□□□ 1.01
SRGAP2C-205ENST00000617209 CCDC7Q96M83 1385 aa21.36■■□□□ 1.01
SRGAP2C-205ENST00000617209 PDE3BQ13370 1112 aa21.35■■□□□ 1.01
SRGAP2C-205ENST00000617209 PANK3Q9H999 370 aa21.35■■□□□ 1.01
SRGAP2C-205ENST00000617209 FBLN1P23142 703 aa21.34■■□□□ 1.01
SRGAP2C-205ENST00000617209 ANKRD24Q8TF21 1146 aa21.34■■□□□ 1.01
SRGAP2C-205ENST00000617209 FAM196AQ6ZSG2 479 aa21.33■■□□□ 1.01
SRGAP2C-205ENST00000617209 WNK3Q9BYP7 1800 aa21.33■■□□□ 1.01
SRGAP2C-205ENST00000617209 KIF24Q5T7B8 1368 aa21.33■■□□□ 1
SRGAP2C-205ENST00000617209 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
SRGAP2C-205ENST00000617209 HOXC9P31274 260 aa21.32■■□□□ 1
SRGAP2C-205ENST00000617209 AMPHP49418 695 aa21.32■■□□□ 1
SRGAP2C-205ENST00000617209 RTL1A6NKG5 1358 aa21.32■■□□□ 1
SRGAP2C-205ENST00000617209 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
SRGAP2C-205ENST00000617209 DISP2A7MBM2 1401 aa21.3■■□□□ 1
SRGAP2C-205ENST00000617209 DDB1Q16531 1140 aa21.3■■□□□ 1
SRGAP2C-205ENST00000617209 FAM182BQ5T319 152 aa21.3■■□□□ 1
SRGAP2C-205ENST00000617209 NLRP2Q9NX02 1062 aa21.3■■□□□ 1
SRGAP2C-205ENST00000617209 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
SRGAP2C-205ENST00000617209 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
SRGAP2C-205ENST00000617209 ANKRD26Q9UPS8 1709 aa21.29■■□□□ 1
SRGAP2C-205ENST00000617209 LRRC37A3O60309 1634 aa21.28■■□□□ 1
SRGAP2C-205ENST00000617209 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
SRGAP2C-205ENST00000617209 RGPD1P0DJD0 1748 aa21.27■■□□□ 1
SRGAP2C-205ENST00000617209 NSD2O96028 1365 aa21.26■□□□□ 0.99
SRGAP2C-205ENST00000617209 INSRP06213 1382 aa21.26■□□□□ 0.99
SRGAP2C-205ENST00000617209 EXOC5O00471 708 aa21.26■□□□□ 0.99
SRGAP2C-205ENST00000617209 FLT4P35916 1363 aa21.25■□□□□ 0.99
SRGAP2C-205ENST00000617209 PEAK1Q9H792 1746 aa21.25■□□□□ 0.99
SRGAP2C-205ENST00000617209 IL2RBP14784 551 aa21.24■□□□□ 0.99
SRGAP2C-205ENST00000617209 LTV1Q96GA3 475 aaPredicted RBP21.24■□□□□ 0.99
SRGAP2C-205ENST00000617209 KNSTRNQ9Y448 316 aa21.24■□□□□ 0.99
SRGAP2C-205ENST00000617209 BCL9O00512 1426 aa21.23■□□□□ 0.99
SRGAP2C-205ENST00000617209 OVOS2A0A0G2JMS6 1433 aa21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 PER1O15534 1290 aaPredicted RBP21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 BAG6P46379 1132 aa21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 HSP90AB2PQ58FF8 381 aa21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 DEFB132Q7Z7B7 95 aa21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 RGPD2P0DJD1 1756 aa21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
SRGAP2C-205ENST00000617209 TNS1Q9HBL0 1735 aaKnown RBP21.21■□□□□ 0.99
SRGAP2C-205ENST00000617209 TRIM37O94972 964 aa21.21■□□□□ 0.99
SRGAP2C-205ENST00000617209 POLKQ9UBT6 870 aa21.21■□□□□ 0.99
SRGAP2C-205ENST00000617209 EMILIN1Q9Y6C2 1016 aa21.21■□□□□ 0.99
SRGAP2C-205ENST00000617209 SBF2Q86WG5 1849 aa21.2■□□□□ 0.98
SRGAP2C-205ENST00000617209 TNS2Q63HR2 1409 aa21.2■□□□□ 0.98
SRGAP2C-205ENST00000617209 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
SRGAP2C-205ENST00000617209 AMER1Q5JTC6 1135 aaPredicted RBP21.19■□□□□ 0.98
SRGAP2C-205ENST00000617209 NBPF6Q5VWK0 638 aa21.19■□□□□ 0.98
SRGAP2C-205ENST00000617209 NBPF4Q96M43 638 aa21.19■□□□□ 0.98
SRGAP2C-205ENST00000617209 MORC1Q86VD1 984 aa21.17■□□□□ 0.98
SRGAP2C-205ENST00000617209 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
SRGAP2C-205ENST00000617209 APBA3O96018 575 aa21.15■□□□□ 0.98
SRGAP2C-205ENST00000617209 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
SRGAP2C-205ENST00000617209 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
SRGAP2C-205ENST00000617209 EN1Q05925 392 aaPredicted RBP21.14■□□□□ 0.97
SRGAP2C-205ENST00000617209 CAMKK2Q96RR4 588 aa21.14■□□□□ 0.97
SRGAP2C-205ENST00000617209 BCL11BQ9C0K0 894 aaPredicted RBP21.14■□□□□ 0.97
SRGAP2C-205ENST00000617209 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
SRGAP2C-205ENST00000617209 NCAPD2Q15021 1401 aa21.12■□□□□ 0.97
SRGAP2C-205ENST00000617209 PLSCR1O15162 318 aa21.11■□□□□ 0.97
SRGAP2C-205ENST00000617209 ZCRB1Q8TBF4 217 aaKnown RBP21.1■□□□□ 0.97
SRGAP2C-205ENST00000617209 RAPGEF4Q8WZA2 1011 aa21.1■□□□□ 0.97
SRGAP2C-205ENST00000617209 EZH2Q15910 746 aaKnown RBP21.09■□□□□ 0.97
SRGAP2C-205ENST00000617209 USHBP1Q8N6Y0 703 aa21.09■□□□□ 0.97
SRGAP2C-205ENST00000617209 MEGF6O75095 1541 aa21.09■□□□□ 0.97
SRGAP2C-205ENST00000617209 KAT6BQ8WYB5 2073 aa21.08■□□□□ 0.97
SRGAP2C-205ENST00000617209 TATP17735 454 aaPredicted RBP21.08■□□□□ 0.97
SRGAP2C-205ENST00000617209 EYA1Q99502 592 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms