RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 FCHSD2O94868 740 aa21.1■□□□□ 0.97
ATXN2-227ENST00000616825 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
ATXN2-227ENST00000616825 PIP4K2AP48426 406 aaPredicted RBP21.09■□□□□ 0.97
ATXN2-227ENST00000616825 CCAR1Q8IX12 1150 aaKnown RBP21.09■□□□□ 0.97
ATXN2-227ENST00000616825 AK7Q96M32 723 aa21.09■□□□□ 0.97
ATXN2-227ENST00000616825 SRGAP3O43295 1099 aa21.09■□□□□ 0.97
ATXN2-227ENST00000616825 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
ATXN2-227ENST00000616825 MVPQ14764 893 aaKnown RBP21.08■□□□□ 0.97
ATXN2-227ENST00000616825 MYL6BP14649 208 aa21.07■□□□□ 0.96
ATXN2-227ENST00000616825 ZSCAN25Q6NSZ9 544 aa21.06■□□□□ 0.96
ATXN2-227ENST00000616825 SMC2O95347 1197 aa21.06■□□□□ 0.96
ATXN2-227ENST00000616825 KRT18P05783 430 aaKnown RBP21.06■□□□□ 0.96
ATXN2-227ENST00000616825 ATP2B2Q01814 1243 aa21.06■□□□□ 0.96
ATXN2-227ENST00000616825 CEBPZQ03701 1054 aaKnown RBP21.06■□□□□ 0.96
ATXN2-227ENST00000616825 PATL2C9JE40 543 aaKnown RBP21.05■□□□□ 0.96
ATXN2-227ENST00000616825 RPAP2Q8IXW5 612 aaPredicted RBP21.05■□□□□ 0.96
ATXN2-227ENST00000616825 IL27Q8NEV9 243 aa21.05■□□□□ 0.96
ATXN2-227ENST00000616825 BLOC1S2Q6QNY1 142 aa21.05■□□□□ 0.96
ATXN2-227ENST00000616825 MAGEC2Q9UBF1 373 aaPredicted RBP21.05■□□□□ 0.96
ATXN2-227ENST00000616825 AEBP1Q8IUX7 1158 aa21.05■□□□□ 0.96
ATXN2-227ENST00000616825 SMARCE1Q969G3 411 aa21.05■□□□□ 0.96
ATXN2-227ENST00000616825 WDR33Q9C0J8 1336 aaKnown RBP21.05■□□□□ 0.96
ATXN2-227ENST00000616825 RRS1Q15050 365 aaKnown RBP21.04■□□□□ 0.96
ATXN2-227ENST00000616825 RDXP35241 583 aaKnown RBP21.04■□□□□ 0.96
ATXN2-227ENST00000616825 VSIG10Q8N0Z9 540 aa21.04■□□□□ 0.96
ATXN2-227ENST00000616825 TSPY26PQ9H489 355 aa21.04■□□□□ 0.96
ATXN2-227ENST00000616825 KRT85P78386 507 aa21.04■□□□□ 0.96
ATXN2-227ENST00000616825 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
ATXN2-227ENST00000616825 NUTM2BA6NNL0 878 aaPredicted RBP21.03■□□□□ 0.96
ATXN2-227ENST00000616825 NUTM2EB1AL46 878 aaPredicted RBP21.03■□□□□ 0.96
ATXN2-227ENST00000616825 FKBP4Q02790 459 aaKnown RBP eCLIP21.03■□□□□ 0.96
ATXN2-227ENST00000616825 CHD1LQ86WJ1 897 aa21.03■□□□□ 0.96
ATXN2-227ENST00000616825 NUTM2AQ8IVF1 878 aaPredicted RBP21.03■□□□□ 0.96
ATXN2-227ENST00000616825 AACSQ86V21 672 aa21.03■□□□□ 0.96
ATXN2-227ENST00000616825 CTNNA3Q9UI47 895 aa21.03■□□□□ 0.96
ATXN2-227ENST00000616825 ME1P48163 572 aa21.03■□□□□ 0.96
ATXN2-227ENST00000616825 TTLL5Q6EMB2 1281 aa21.03■□□□□ 0.96
ATXN2-227ENST00000616825 BRPF1P55201 1214 aaPredicted RBP21.02■□□□□ 0.96
ATXN2-227ENST00000616825 HSP90AB2PQ58FF8 381 aa21.02■□□□□ 0.96
ATXN2-227ENST00000616825 LARP1BQ659C4 914 aaKnown RBP21.02■□□□□ 0.96
ATXN2-227ENST00000616825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.02■□□□□ 0.962e-7■■■■■ 61.3
ATXN2-227ENST00000616825 NFE2L2Q16236 605 aa21.02■□□□□ 0.96
ATXN2-227ENST00000616825 STK3Q13188 491 aa21.02■□□□□ 0.95
ATXN2-227ENST00000616825 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
ATXN2-227ENST00000616825 SF3B2Q13435 895 aaKnown RBP21.01■□□□□ 0.95
ATXN2-227ENST00000616825 TMEM132AQ24JP5 1023 aa21.01■□□□□ 0.95
ATXN2-227ENST00000616825 BACH2Q9BYV9 841 aa21.01■□□□□ 0.95
ATXN2-227ENST00000616825 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
ATXN2-227ENST00000616825 ERBINQ96RT1 1412 aa21■□□□□ 0.95
ATXN2-227ENST00000616825 DCAF8L1A6NGE4 600 aa21■□□□□ 0.95
ATXN2-227ENST00000616825 NUDT16Q96DE0 195 aaKnown RBP21■□□□□ 0.95
ATXN2-227ENST00000616825 IL1RAPL2Q9NP60 686 aa21■□□□□ 0.95
ATXN2-227ENST00000616825 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
ATXN2-227ENST00000616825 CCDC192P0DO97 292 aa21■□□□□ 0.95
ATXN2-227ENST00000616825 SOGA3Q5TF21 947 aa21■□□□□ 0.95
ATXN2-227ENST00000616825 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
ATXN2-227ENST00000616825 ZNHIT6Q9NWK9 470 aaKnown RBP21■□□□□ 0.95
ATXN2-227ENST00000616825 K7ELQ4 463 aaPredicted RBP21■□□□□ 0.95
ATXN2-227ENST00000616825 TMPOP42166 694 aaKnown RBP21■□□□□ 0.95
ATXN2-227ENST00000616825 CCDC69A6NI79 296 aa20.99■□□□□ 0.95
ATXN2-227ENST00000616825 CCP110O43303 1012 aa20.99■□□□□ 0.95
ATXN2-227ENST00000616825 PPP1R1BQ9UD71 204 aaPredicted RBP20.99■□□□□ 0.95
ATXN2-227ENST00000616825 KRT32Q14532 448 aa20.99■□□□□ 0.95
ATXN2-227ENST00000616825 STIM1Q13586 685 aa20.99■□□□□ 0.95
ATXN2-227ENST00000616825 KCNH5Q8NCM2 988 aa20.99■□□□□ 0.95
ATXN2-227ENST00000616825 NUP133Q8WUM0 1156 aa20.98■□□□□ 0.95
ATXN2-227ENST00000616825 SYCP1Q15431 976 aa20.98■□□□□ 0.95
ATXN2-227ENST00000616825 KRI1Q8N9T8 703 aaKnown RBP20.98■□□□□ 0.95
ATXN2-227ENST00000616825 FBXO3Q9UK99 471 aa20.98■□□□□ 0.95
ATXN2-227ENST00000616825 MYO6Q9UM54 1294 aa20.98■□□□□ 0.95
ATXN2-227ENST00000616825 CDKL5O76039 1030 aa20.97■□□□□ 0.95
ATXN2-227ENST00000616825 DHX8Q14562 1220 aaKnown RBP20.97■□□□□ 0.95
ATXN2-227ENST00000616825 WWC2Q6AWC2 1192 aa20.97■□□□□ 0.95
ATXN2-227ENST00000616825 UBAC1Q9BSL1 405 aa20.97■□□□□ 0.95
ATXN2-227ENST00000616825 SERPINC1P01008 464 aa20.97■□□□□ 0.95
ATXN2-227ENST00000616825 HMGN5P82970 282 aaKnown RBP20.97■□□□□ 0.95
ATXN2-227ENST00000616825 ZSCAN31Q96LW9 406 aaPredicted RBP20.97■□□□□ 0.95
ATXN2-227ENST00000616825 TDO2P48775 406 aa20.96■□□□□ 0.95
ATXN2-227ENST00000616825 STK11IPQ8N1F8 1099 aa20.96■□□□□ 0.95
ATXN2-227ENST00000616825 TNMDQ9H2S6 317 aa20.96■□□□□ 0.95
ATXN2-227ENST00000616825 NOL7Q9UMY1 257 aaKnown RBP20.96■□□□□ 0.95
ATXN2-227ENST00000616825 AKNAQ7Z591 1439 aa20.96■□□□□ 0.95
ATXN2-227ENST00000616825 MAP4K4O95819 1239 aaPredicted RBP20.96■□□□□ 0.95
ATXN2-227ENST00000616825 LUC7LQ9NQ29 371 aaKnown RBP20.96■□□□□ 0.95
ATXN2-227ENST00000616825 POGZQ7Z3K3 1410 aa20.96■□□□□ 0.95
ATXN2-227ENST00000616825 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.95
ATXN2-227ENST00000616825 XPCQ01831 940 aaPredicted RBP20.95■□□□□ 0.94
ATXN2-227ENST00000616825 STARD3NLO95772 234 aa20.95■□□□□ 0.94
ATXN2-227ENST00000616825 PDIA4P13667 645 aaKnown RBP20.95■□□□□ 0.94
ATXN2-227ENST00000616825 MTERF4Q7Z6M4 381 aaKnown RBP20.95■□□□□ 0.94
ATXN2-227ENST00000616825 DACH1Q9UI36 760 aa20.95■□□□□ 0.94
ATXN2-227ENST00000616825 CWC27Q6UX04 472 aaKnown RBP20.95■□□□□ 0.94
ATXN2-227ENST00000616825 JAKMIP1Q96N16 626 aaKnown RBP20.95■□□□□ 0.94
ATXN2-227ENST00000616825 LRP2BPQ9P2M1 347 aa20.95■□□□□ 0.94
ATXN2-227ENST00000616825 BCL11BQ9C0K0 894 aaPredicted RBP20.94■□□□□ 0.94
ATXN2-227ENST00000616825 ZHX3Q9H4I2 956 aa20.94■□□□□ 0.94
ATXN2-227ENST00000616825 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
ATXN2-227ENST00000616825 PDCL3Q9H2J4 239 aa20.94■□□□□ 0.94
ATXN2-227ENST00000616825 RAI14Q9P0K7 980 aa20.94■□□□□ 0.94
ATXN2-227ENST00000616825 CFAP45Q9UL16 551 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms