RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 QSER1Q2KHR3 1735 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 TOPAZ1Q8N9V7 1692 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 HSPA6P17066 643 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 BCL9O00512 1426 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 CRB1P82279 1406 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 COL18A1P39060 1754 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 ADGRB1O14514 1584 aa10.39□□□□□ -0.75
MUC1-227ENST00000615517 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
MUC1-227ENST00000615517 DDB1Q16531 1140 aa10.38□□□□□ -0.75
MUC1-227ENST00000615517 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
MUC1-227ENST00000615517 ATP10DQ9P241 1426 aa10.38□□□□□ -0.75
MUC1-227ENST00000615517 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
MUC1-227ENST00000615517 AATKQ6ZMQ8 1374 aa10.38□□□□□ -0.75
MUC1-227ENST00000615517 NHSQ6T4R5 1651 aa10.37□□□□□ -0.75
MUC1-227ENST00000615517 USP19O94966 1318 aa10.36□□□□□ -0.75
MUC1-227ENST00000615517 BTAF1O14981 1849 aa10.36□□□□□ -0.75
MUC1-227ENST00000615517 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
MUC1-227ENST00000615517 NLGN2Q8NFZ4 835 aa10.36□□□□□ -0.75
MUC1-227ENST00000615517 TRAK1Q9UPV9 953 aa10.36□□□□□ -0.75
MUC1-227ENST00000615517 ZNF827Q17R98 1081 aa10.35□□□□□ -0.75
MUC1-227ENST00000615517 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
MUC1-227ENST00000615517 ARHGEF28Q8N1W1 1705 aaKnown RBP10.35□□□□□ -0.75
MUC1-227ENST00000615517 GCP02774 474 aa10.34□□□□□ -0.75
MUC1-227ENST00000615517 POTEDQ86YR6 584 aa10.34□□□□□ -0.75
MUC1-227ENST00000615517 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
MUC1-227ENST00000615517 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
MUC1-227ENST00000615517 ABTB2Q8N961 1025 aa10.33□□□□□ -0.76
MUC1-227ENST00000615517 ACEP12821 1306 aa10.33□□□□□ -0.76
MUC1-227ENST00000615517 ADCY9O60503 1353 aa10.32□□□□□ -0.76
MUC1-227ENST00000615517 PPARGC1BQ86YN6 1023 aaKnown RBP10.32□□□□□ -0.76
MUC1-227ENST00000615517 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
MUC1-227ENST00000615517 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
MUC1-227ENST00000615517 LRRC4BQ9NT99 713 aa10.31□□□□□ -0.76
MUC1-227ENST00000615517 ZBTB7CA1YPR0 619 aa10.3□□□□□ -0.76
MUC1-227ENST00000615517 GRIN3BO60391 1043 aa10.3□□□□□ -0.76
MUC1-227ENST00000615517 CAPN15O75808 1086 aa10.3□□□□□ -0.76
MUC1-227ENST00000615517 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
MUC1-227ENST00000615517 DNAJC5GQ8N7S2 189 aa10.3□□□□□ -0.76
MUC1-227ENST00000615517 ZNF526Q8TF50 670 aaPredicted RBP10.3□□□□□ -0.76
MUC1-227ENST00000615517 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
MUC1-227ENST00000615517 AXIN2Q9Y2T1 843 aa10.3□□□□□ -0.76
MUC1-227ENST00000615517 SLIT3O75094 1523 aa10.29□□□□□ -0.76
MUC1-227ENST00000615517 POLD1P28340 1107 aa10.29□□□□□ -0.76
MUC1-227ENST00000615517 NLRP13Q86W25 1043 aa10.29□□□□□ -0.76
MUC1-227ENST00000615517 ACSBG1Q96GR2 724 aa10.29□□□□□ -0.76
MUC1-227ENST00000615517 PNPLA7Q6ZV29 1317 aa10.29□□□□□ -0.76
MUC1-227ENST00000615517 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
MUC1-227ENST00000615517 PCNTO95613 3336 aa10.28□□□□□ -0.76
MUC1-227ENST00000615517 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
MUC1-227ENST00000615517 KIF3CO14782 793 aa10.28□□□□□ -0.76
MUC1-227ENST00000615517 SLC16A10Q8TF71 515 aa10.28□□□□□ -0.76
MUC1-227ENST00000615517 MPHOSPH9Q99550 1183 aa10.28□□□□□ -0.76
MUC1-227ENST00000615517 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
MUC1-227ENST00000615517 CDK19Q9BWU1 502 aa10.28□□□□□ -0.76
MUC1-227ENST00000615517 WDR90Q96KV7 1748 aa10.27□□□□□ -0.76
MUC1-227ENST00000615517 TRPM1Q7Z4N2 1603 aa10.27□□□□□ -0.77
MUC1-227ENST00000615517 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
MUC1-227ENST00000615517 PIK3C2AO00443 1686 aa10.26□□□□□ -0.77
MUC1-227ENST00000615517 EXOC5O00471 708 aa10.26□□□□□ -0.77
MUC1-227ENST00000615517 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
MUC1-227ENST00000615517 USP6P35125 1406 aa10.25□□□□□ -0.77
MUC1-227ENST00000615517 LY75O60449 1722 aa10.25□□□□□ -0.77
MUC1-227ENST00000615517 ABCC6O95255 1503 aa10.25□□□□□ -0.77
MUC1-227ENST00000615517 APLP1P51693 650 aa10.25□□□□□ -0.77
MUC1-227ENST00000615517 PRELPP51888 382 aa10.25□□□□□ -0.77
MUC1-227ENST00000615517 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
MUC1-227ENST00000615517 BRD4O60885 1362 aaPredicted RBP10.25□□□□□ -0.77
MUC1-227ENST00000615517 MAPK8IP2Q13387 824 aaPredicted RBP10.24□□□□□ -0.77
MUC1-227ENST00000615517 CPSF1Q10570 1443 aaKnown RBP10.24□□□□□ -0.77
MUC1-227ENST00000615517 KCNQ4P56696 695 aa10.22□□□□□ -0.77
MUC1-227ENST00000615517 NLRP6P59044 892 aa10.22□□□□□ -0.77
MUC1-227ENST00000615517 PPIP5K1Q6PFW1 1433 aa10.22□□□□□ -0.77
MUC1-227ENST00000615517 SLC34A2O95436 690 aa10.21□□□□□ -0.77
MUC1-227ENST00000615517 ARHGEF25Q86VW2 580 aa10.21□□□□□ -0.77
MUC1-227ENST00000615517 TNS4Q8IZW8 715 aa10.21□□□□□ -0.77
MUC1-227ENST00000615517 TFCP2L1Q9NZI6 479 aa10.21□□□□□ -0.77
MUC1-227ENST00000615517 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 HTRA3P83110 453 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 SLC27A3Q5K4L6 730 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 JMYQ8N9B5 988 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 CCDC7Q96M83 1385 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 QRICH2Q9H0J4 1663 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
MUC1-227ENST00000615517 COL23A1Q86Y22 540 aaPredicted RBP10.19□□□□□ -0.78
MUC1-227ENST00000615517 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
MUC1-227ENST00000615517 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
MUC1-227ENST00000615517 NFAT5O94916 1531 aa10.18□□□□□ -0.78
MUC1-227ENST00000615517 MSL1Q68DK7 614 aa10.18□□□□□ -0.78
MUC1-227ENST00000615517 KLRG1Q96E93 195 aa10.18□□□□□ -0.78
MUC1-227ENST00000615517 CD2APQ9Y5K6 639 aa10.18□□□□□ -0.78
MUC1-227ENST00000615517 CICQ96RK0 1608 aaPredicted RBP10.18□□□□□ -0.78
MUC1-227ENST00000615517 LTN1O94822 1766 aa10.17□□□□□ -0.78
MUC1-227ENST00000615517 TOMM70O94826 608 aa10.17□□□□□ -0.78
MUC1-227ENST00000615517 DCAF11Q8TEB1 546 aa10.17□□□□□ -0.78
MUC1-227ENST00000615517 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
MUC1-227ENST00000615517 C5P01031 1676 aa10.16□□□□□ -0.78
MUC1-227ENST00000615517 USP54Q70EL1 1684 aa10.16□□□□□ -0.78
MUC1-227ENST00000615517 SOX12O15370 315 aa10.16□□□□□ -0.78
MUC1-227ENST00000615517 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
MUC1-227ENST00000615517 IL2RBP14784 551 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms