RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MAP2P11137 1827 aaKnown RBP4.44□□□□□ -1.7
LIG4-205ENST00000614526 ZC3H6P61129 1189 aaKnown RBP4.44□□□□□ -1.7
LIG4-205ENST00000614526 CCDC27Q2M243 656 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 NGEFQ8N5V2 710 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 CABLES1Q8TDN4 633 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 SSH1Q8WYL5 1049 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 EYA1Q99502 592 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 USP32Q8NFA0 1604 aa4.44□□□□□ -1.7
LIG4-205ENST00000614526 DIP2AQ14689 1571 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 RGPD8O14715 1765 aaPredicted RBP4.43□□□□□ -1.7
LIG4-205ENST00000614526 SETD1BQ9UPS6 1966 aaKnown RBP4.43□□□□□ -1.7
LIG4-205ENST00000614526 ATF3P18847 181 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 ADAMTSL3P82987 1691 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 RGS3P49796 1198 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 LRRC59Q96AG4 307 aaKnown RBP4.43□□□□□ -1.7
LIG4-205ENST00000614526 AATKQ6ZMQ8 1374 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 TTC21AQ8NDW8 1320 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 IQSEC2Q5JU85 1478 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 HOXC9P31274 260 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 KRT28Q7Z3Y7 464 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 FTSJ3Q8IY81 847 aaKnown RBP4.43□□□□□ -1.7
LIG4-205ENST00000614526 MBIPQ9NS73 344 aa4.43□□□□□ -1.7
LIG4-205ENST00000614526 NOB1Q9ULX3 412 aaKnown RBP4.43□□□□□ -1.7
LIG4-205ENST00000614526 MTHFSDQ2M296 383 aaKnown RBP4.42□□□□□ -1.7
LIG4-205ENST00000614526 NECTIN2Q92692 538 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 C19orf44Q9H6X5 657 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 KNDC1Q76NI1 1749 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 TMEM94Q12767 1356 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 PIK3R4Q99570 1358 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 OVOS2A0A0J9YW53 1432 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 IGHDP01880 384 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 OVOS2Q6IE36 1432 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 NPM2Q86SE8 214 aaKnown RBP4.42□□□□□ -1.7
LIG4-205ENST00000614526 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 KIF20BQ96Q89 1820 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 LRRC7Q96NW7 1537 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 SSH2Q76I76 1423 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 ITPRIPQ8IWB1 547 aa4.42□□□□□ -1.7
LIG4-205ENST00000614526 GCP02774 474 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 CHRNA2Q15822 529 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 RTF1Q92541 710 aaKnown RBP4.41□□□□□ -1.7
LIG4-205ENST00000614526 ZNF335Q9H4Z2 1342 aaPredicted RBP4.41□□□□□ -1.7
LIG4-205ENST00000614526 TRIM27P14373 513 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 NBPF6Q5VWK0 638 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 ZKSCAN2Q63HK3 967 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 NBPF4Q96M43 638 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 FLT4P35916 1363 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 GNAI1P63096 354 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 TWISTNBQ3B726 338 aaPredicted RBP4.41□□□□□ -1.7
LIG4-205ENST00000614526 DZIP1LQ8IYY4 767 aaKnown RBP4.41□□□□□ -1.7
LIG4-205ENST00000614526 AXIN2Q9Y2T1 843 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 PCDHB15Q9Y5E8 787 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 USP31Q70CQ4 1352 aa4.41□□□□□ -1.7
LIG4-205ENST00000614526 CDK12Q9NYV4 1490 aaPredicted RBP4.41□□□□□ -1.7
LIG4-205ENST00000614526 ITSN1Q15811 1721 aa4.4□□□□□ -1.7
LIG4-205ENST00000614526 ADGRL3Q9HAR2 1447 aa4.4□□□□□ -1.7
LIG4-205ENST00000614526 VAMP4O75379 141 aa4.4□□□□□ -1.7
LIG4-205ENST00000614526 TMEM57Q8N5G2 664 aa4.4□□□□□ -1.7
LIG4-205ENST00000614526 SBNO1A3KN83 1393 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 MON2Q7Z3U7 1717 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 XRN1Q8IZH2 1706 aaKnown RBP4.4□□□□□ -1.71
LIG4-205ENST00000614526 PDE3AQ14432 1141 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 CFAP44Q96MT7 982 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 C1orf115Q9H7X2 142 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 ADGRB2O60241 1585 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 TSPYL4Q9UJ04 414 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 ANKARQ7Z5J8 1434 aa4.4□□□□□ -1.71
LIG4-205ENST00000614526 ANKRD26Q9UPS8 1709 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 LMOD3Q0VAK6 560 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 ATF7IPQ6VMQ6 1270 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 IP6K1Q92551 441 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 IFT57Q9NWB7 429 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 IL16Q14005 1332 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 AKAP12Q02952 1782 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 CSB-PGBD3P0DP91 1061 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 CALD1Q05682 793 aaKnown RBP4.39□□□□□ -1.71
LIG4-205ENST00000614526 LGR6Q9HBX8 967 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 NLRP2Q9NX02 1062 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 CHD2O14647 1828 aaKnown RBP4.39□□□□□ -1.71
LIG4-205ENST00000614526 NALCNQ8IZF0 1738 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 ZNF853P0CG23 659 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 HAP1P54257 671 aaPredicted RBP4.39□□□□□ -1.71
LIG4-205ENST00000614526 MVPQ14764 893 aaKnown RBP4.39□□□□□ -1.71
LIG4-205ENST00000614526 MPRIPQ6WCQ1 1025 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 CENPQQ7L2Z9 268 aaPredicted RBP4.39□□□□□ -1.71
LIG4-205ENST00000614526 KCNH5Q8NCM2 988 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 IL17REQ8NFR9 667 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 ANKRD24Q8TF21 1146 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 ZNF428Q96B54 188 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 IGSF1Q8N6C5 1336 aa4.39□□□□□ -1.71
LIG4-205ENST00000614526 PEAK1Q9H792 1746 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 C1orf167Q5SNV9 1468 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 CADPS2Q86UW7 1296 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 KDM2BQ8NHM5 1336 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 TOPAZ1Q8N9V7 1692 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 GNAT3A8MTJ3 354 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 PDE4AP27815 886 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 SLC4A10Q6U841 1118 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 ARHGEF25Q86VW2 580 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 MRPL50Q8N5N7 158 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms