RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 ARID3AQ99856 593 aa13.84□□□□□ -0.19
SENP3-EIF4A1-201ENST00000614237 USP6P35125 1406 aa13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 IGHDP01880 384 aa13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 PEAK1Q9H792 1746 aa13.82□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 ARHGAP45Q92619 1136 aa13.82□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 RIPK4P57078 832 aa13.81□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 TXNDC2Q86VQ3 553 aa13.81□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 KIF24Q5T7B8 1368 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 KIF16BQ96L93 1317 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 RLBP1P12271 317 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 LTKP29376 864 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 MLECQ14165 292 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 COG3Q96JB2 828 aa13.8□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 RWDD1Q9H446 243 aaPredicted RBP13.79□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 EXOSC9Q06265 439 aaKnown RBP13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 TTC21BQ7Z4L5 1316 aa13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 ATF7IPQ6VMQ6 1270 aa13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 CEP170BQ9Y4F5 1589 aaPredicted RBP13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.2
SENP3-EIF4A1-201ENST00000614237 NME9Q86XW9 330 aa13.77□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PCDHB15Q9Y5E8 787 aa13.77□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 SSH1Q8WYL5 1049 aa13.77□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 EID1Q9Y6B2 187 aa13.77□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PHRF1Q9P1Y6 1649 aaKnown RBP13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PRKAR2BP31323 418 aa13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 GNAI1P63096 354 aa13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 LRRC37A3O60309 1634 aa13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 TRIM27P14373 513 aa13.76□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 ARHGEF10O15013 1369 aa13.75□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.75□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 RRAGDQ9NQL2 400 aaPredicted RBP13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 ZBTB40Q9NUA8 1239 aa13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 KDRP35968 1356 aa13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 ACEP12821 1306 aa13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 RGPD8O14715 1765 aaPredicted RBP13.74□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 KIAA0232Q92628 1395 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 VAMP4O75379 141 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 SMC4Q9NTJ3 1288 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 USP19O94966 1318 aa13.73□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 SEC24BO95487 1268 aa13.72□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 PANK2Q9BZ23 570 aa13.72□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 N4BP2Q86UW6 1770 aaPredicted RBP13.71□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 ABCC4O15439 1325 aa13.71□□□□□ -0.21
SENP3-EIF4A1-201ENST00000614237 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 TNNQ9UQP3 1299 aa13.7□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 AMOTL2Q9Y2J4 779 aa13.7□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 CRB1P82279 1406 aa13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 FLT4P35916 1363 aa13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 MBIPQ9NS73 344 aa13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 RTL1A6NKG5 1358 aa13.67□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 CHL1O00533 1208 aa13.67□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 HSP90AA2PQ14568 343 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms