RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ZNF521Q96K83 1311 aa12.89□□□□□ -0.35
GGA3-221ENST00000614198 ATF3P18847 181 aa12.89□□□□□ -0.35
GGA3-221ENST00000614198 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
GGA3-221ENST00000614198 PEAK1Q9H792 1746 aa12.89□□□□□ -0.35
GGA3-221ENST00000614198 OVOS2A0A0J9YW53 1432 aa12.89□□□□□ -0.35
GGA3-221ENST00000614198 OVOS2Q6IE36 1432 aa12.89□□□□□ -0.35
GGA3-221ENST00000614198 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
GGA3-221ENST00000614198 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
GGA3-221ENST00000614198 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
GGA3-221ENST00000614198 PNPLA6Q8IY17 1366 aa12.88□□□□□ -0.35
GGA3-221ENST00000614198 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
GGA3-221ENST00000614198 DCTN1Q14203 1278 aa12.88□□□□□ -0.35
GGA3-221ENST00000614198 TSR2Q969E8 191 aaKnown RBP12.87□□□□□ -0.35
GGA3-221ENST00000614198 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
GGA3-221ENST00000614198 GSE1Q14687 1217 aa12.87□□□□□ -0.35
GGA3-221ENST00000614198 SULT6B1Q6IMI4 303 aa12.87□□□□□ -0.35
GGA3-221ENST00000614198 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
GGA3-221ENST00000614198 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
GGA3-221ENST00000614198 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
GGA3-221ENST00000614198 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
GGA3-221ENST00000614198 AMPHP49418 695 aa12.86□□□□□ -0.35
GGA3-221ENST00000614198 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
GGA3-221ENST00000614198 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
GGA3-221ENST00000614198 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
GGA3-221ENST00000614198 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
GGA3-221ENST00000614198 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
GGA3-221ENST00000614198 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
GGA3-221ENST00000614198 RIPK4P57078 832 aa12.85□□□□□ -0.35
GGA3-221ENST00000614198 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
GGA3-221ENST00000614198 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
GGA3-221ENST00000614198 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
GGA3-221ENST00000614198 BCL2L13Q9BXK5 485 aa12.85□□□□□ -0.35
GGA3-221ENST00000614198 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
GGA3-221ENST00000614198 TCERG1O14776 1098 aaKnown RBP12.84□□□□□ -0.35
GGA3-221ENST00000614198 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
GGA3-221ENST00000614198 BCAR3O75815 825 aa12.84□□□□□ -0.35
GGA3-221ENST00000614198 MST1RQ04912 1400 aa12.84□□□□□ -0.35
GGA3-221ENST00000614198 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.36
GGA3-221ENST00000614198 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
GGA3-221ENST00000614198 IQSEC2Q5JU85 1478 aa12.83□□□□□ -0.36
GGA3-221ENST00000614198 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
GGA3-221ENST00000614198 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
GGA3-221ENST00000614198 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
GGA3-221ENST00000614198 EYA1Q99502 592 aa12.82□□□□□ -0.36
GGA3-221ENST00000614198 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
GGA3-221ENST00000614198 PDE4AP27815 886 aa12.81□□□□□ -0.36
GGA3-221ENST00000614198 HOXC9P31274 260 aa12.81□□□□□ -0.36
GGA3-221ENST00000614198 BRINP3Q76B58 766 aa12.81□□□□□ -0.36
GGA3-221ENST00000614198 GCP02774 474 aa12.81□□□□□ -0.36
GGA3-221ENST00000614198 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
GGA3-221ENST00000614198 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
GGA3-221ENST00000614198 TNNQ9UQP3 1299 aa12.8□□□□□ -0.36
GGA3-221ENST00000614198 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
GGA3-221ENST00000614198 MSH6P52701 1360 aa12.8□□□□□ -0.36
GGA3-221ENST00000614198 MS4A1P11836 297 aa12.8□□□□□ -0.36
GGA3-221ENST00000614198 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
GGA3-221ENST00000614198 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
GGA3-221ENST00000614198 MCM10Q7L590 875 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 FCHSD2O94868 740 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 EXOC6Q8TAG9 804 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 RRP1P56182 461 aaKnown RBP12.79□□□□□ -0.36
GGA3-221ENST00000614198 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
GGA3-221ENST00000614198 TRMT2AQ8IZ69 625 aaKnown RBP12.78□□□□□ -0.36
GGA3-221ENST00000614198 PHF23Q9BUL5 403 aaPredicted RBP12.78□□□□□ -0.36
GGA3-221ENST00000614198 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.36
GGA3-221ENST00000614198 DDRGK1Q96HY6 314 aa12.77□□□□□ -0.36
GGA3-221ENST00000614198 NBPF4Q96M43 638 aa12.77□□□□□ -0.36
GGA3-221ENST00000614198 INSRP06213 1382 aa12.77□□□□□ -0.37
GGA3-221ENST00000614198 LTN1O94822 1766 aa12.77□□□□□ -0.37
GGA3-221ENST00000614198 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
GGA3-221ENST00000614198 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
GGA3-221ENST00000614198 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 FLT4P35916 1363 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 NFKBIBQ15653 356 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 E9PSI1 815 aa12.76□□□□□ -0.37
GGA3-221ENST00000614198 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
GGA3-221ENST00000614198 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
GGA3-221ENST00000614198 SKAP1Q86WV1 359 aa12.75□□□□□ -0.37
GGA3-221ENST00000614198 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
GGA3-221ENST00000614198 NFE2L2Q16236 605 aa12.74□□□□□ -0.37
GGA3-221ENST00000614198 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
GGA3-221ENST00000614198 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
GGA3-221ENST00000614198 TSPYL6Q8N831 410 aa12.74□□□□□ -0.37
GGA3-221ENST00000614198 CRBNQ96SW2 442 aa12.74□□□□□ -0.37
GGA3-221ENST00000614198 NFAT5O94916 1531 aa12.73□□□□□ -0.37
GGA3-221ENST00000614198 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
GGA3-221ENST00000614198 ARHGEF25Q86VW2 580 aa12.73□□□□□ -0.37
GGA3-221ENST00000614198 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
GGA3-221ENST00000614198 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
GGA3-221ENST00000614198 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
GGA3-221ENST00000614198 ARXQ96QS3 562 aa12.72□□□□□ -0.37
GGA3-221ENST00000614198 IP6K1Q92551 441 aa12.72□□□□□ -0.37
GGA3-221ENST00000614198 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms