RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 MNAT1P51948 309 aa9.84□□□□□ -0.83
ALMS1-206ENST00000613296 PKD2Q13563 968 aa9.84□□□□□ -0.83
ALMS1-206ENST00000613296 CEP164Q9UPV0 1460 aa9.84□□□□□ -0.83
ALMS1-206ENST00000613296 ZNF397Q8NF99 534 aaPredicted RBP9.84□□□□□ -0.83
ALMS1-206ENST00000613296 ATP2B2Q01814 1243 aa9.84□□□□□ -0.83
ALMS1-206ENST00000613296 CNTROBQ8N137 903 aa9.84□□□□□ -0.83
ALMS1-206ENST00000613296 MRPS9P82933 396 aaKnown RBP9.84□□□□□ -0.83
ALMS1-206ENST00000613296 GTPBP4Q9BZE4 634 aaKnown RBP9.84□□□□□ -0.83
ALMS1-206ENST00000613296 VPS36Q86VN1 386 aa9.84□□□□□ -0.83
ALMS1-206ENST00000613296 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
ALMS1-206ENST00000613296 IMMTQ16891 758 aaKnown RBP9.84□□□□□ -0.83
ALMS1-206ENST00000613296 SPA17Q15506 151 aa9.83□□□□□ -0.84
ALMS1-206ENST00000613296 APBB1IPQ7Z5R6 666 aaPredicted RBP9.83□□□□□ -0.84
ALMS1-206ENST00000613296 CCDC178Q5BJE1 867 aa9.83□□□□□ -0.84
ALMS1-206ENST00000613296 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
ALMS1-206ENST00000613296 RPUSD2Q8IZ73 545 aaKnown RBP9.83□□□□□ -0.84
ALMS1-206ENST00000613296 CRBNQ96SW2 442 aa9.83□□□□□ -0.84
ALMS1-206ENST00000613296 TSNARE1Q96NA8 513 aa9.83□□□□□ -0.84
ALMS1-206ENST00000613296 SREK1Q8WXA9 508 aaKnown RBP9.83□□□□□ -0.84
ALMS1-206ENST00000613296 MYBBP1AQ9BQG0 1328 aaKnown RBP9.83□□□□□ -0.84
ALMS1-206ENST00000613296 PRPF40AO75400 957 aaKnown RBP9.83□□□□□ -0.84
ALMS1-206ENST00000613296 TRAK2O60296 914 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 PPP1R14CQ8TAE6 165 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 MPNDQ8N594 471 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 COG3Q96JB2 828 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 KIF2AO00139 706 aaPredicted RBP9.82□□□□□ -0.84
ALMS1-206ENST00000613296 SSBP05455 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
ALMS1-206ENST00000613296 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.82□□□□□ -0.84
ALMS1-206ENST00000613296 EID1Q9Y6B2 187 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 V9GYY5 206 aaPredicted RBP9.82□□□□□ -0.84
ALMS1-206ENST00000613296 SSX2IPQ9Y2D8 614 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 MSL1Q68DK7 614 aa9.82□□□□□ -0.84
ALMS1-206ENST00000613296 PLCD3Q8N3E9 789 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 PRKCSHP14314 528 aaPredicted RBP9.81□□□□□ -0.84
ALMS1-206ENST00000613296 CTR9Q6PD62 1173 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 CCDC6Q16204 474 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 CEP112Q8N8E3 955 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 FBF1Q8TES7 1133 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 IKBKGQ9Y6K9 419 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 CTNNA2P26232 953 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 CASQ1P31415 396 aa9.81□□□□□ -0.84
ALMS1-206ENST00000613296 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
ALMS1-206ENST00000613296 MPHOSPH10O00566 681 aaKnown RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 DNAAF4Q8WXU2 420 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 POLR3GO15318 223 aaPredicted RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 MXRA7P84157 204 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 KIF5CO60282 957 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 HSPA4P34932 840 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 LARP1Q6PKG0 1096 aaKnown RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 MIPOL1Q8TD10 442 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 FSD2A1L4K1 749 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 ARL1P40616 181 aaPredicted RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 CEP83Q9Y592 693 aa9.8□□□□□ -0.84
ALMS1-206ENST00000613296 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 API5Q9BZZ5 524 aaKnown RBP9.8□□□□□ -0.84
ALMS1-206ENST00000613296 DNA2P51530 1060 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 GTF2A1P52655 376 aaPredicted RBP9.79□□□□□ -0.84
ALMS1-206ENST00000613296 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 UPF3BQ9BZI7 483 aaKnown RBP9.79□□□□□ -0.84
ALMS1-206ENST00000613296 MAATS1Q7Z4T9 603 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 ZBED9Q6R2W3 1325 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 GTF2F1P35269 517 aaKnown RBP eCLIP9.79□□□□□ -0.84
ALMS1-206ENST00000613296 PSMC4P43686 418 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 FLIIQ13045 1269 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
ALMS1-206ENST00000613296 FAM184BQ9ULE4 1060 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 CCDC150Q8NCX0 1101 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 SCLT1Q96NL6 688 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 ALS2CR12Q96Q35 445 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 HIP1O00291 1037 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
ALMS1-206ENST00000613296 NUP155O75694 1391 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 CPSF2Q9P2I0 782 aaKnown RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 LNPKQ9C0E8 428 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 ZSCAN12O43309 604 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 RAI14Q9P0K7 980 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 NUTM2GQ5VZR2 741 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 CCDC57Q2TAC2 916 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 SPECC1Q5M775 1068 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 SWAP70Q9UH65 585 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 NEK4P51957 841 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 CBX1P83916 185 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 ANKS4BQ8N8V4 417 aa9.78□□□□□ -0.84
ALMS1-206ENST00000613296 GNL3LQ9NVN8 582 aaKnown RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 NOL7Q9UMY1 257 aaKnown RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 TPD52P55327 224 aaPredicted RBP9.78□□□□□ -0.84
ALMS1-206ENST00000613296 CDKL5O76039 1030 aa9.77□□□□□ -0.84
ALMS1-206ENST00000613296 FEZ2Q9UHY8 353 aaPredicted RBP9.77□□□□□ -0.84
ALMS1-206ENST00000613296 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms