RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
PPP4R3B-204ENST00000612688 NKTRP30414 1462 aaKnown RBP14.96□□□□□ -0.01
PPP4R3B-204ENST00000612688 KNDC1Q76NI1 1749 aa14.96□□□□□ -0.01
PPP4R3B-204ENST00000612688 PSME1Q06323 249 aa14.96□□□□□ -0.02
PPP4R3B-204ENST00000612688 ABTB2Q8N961 1025 aa14.96□□□□□ -0.02
PPP4R3B-204ENST00000612688 EDC4Q6P2E9 1401 aaKnown RBP14.95□□□□□ -0.02
PPP4R3B-204ENST00000612688 DIAPH1O60610 1272 aaKnown RBP14.95□□□□□ -0.02
PPP4R3B-204ENST00000612688 POLR3AO14802 1390 aaPredicted RBP14.95□□□□□ -0.02
PPP4R3B-204ENST00000612688 PIK3R4Q99570 1358 aa14.95□□□□□ -0.02
PPP4R3B-204ENST00000612688 ZNF521Q96K83 1311 aa14.95□□□□□ -0.02
PPP4R3B-204ENST00000612688 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
PPP4R3B-204ENST00000612688 A0A0U1RQG5 324 aaPredicted RBP14.94□□□□□ -0.02
PPP4R3B-204ENST00000612688 RGPD8O14715 1765 aaPredicted RBP14.94□□□□□ -0.02
PPP4R3B-204ENST00000612688 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
PPP4R3B-204ENST00000612688 ZNF142P52746 1687 aaPredicted RBP14.94□□□□□ -0.02
PPP4R3B-204ENST00000612688 RLBP1P12271 317 aa14.94□□□□□ -0.02
PPP4R3B-204ENST00000612688 LTV1Q96GA3 475 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3B-204ENST00000612688 USP6P35125 1406 aa14.92□□□□□ -0.02
PPP4R3B-204ENST00000612688 ATF3P18847 181 aa14.91□□□□□ -0.02
PPP4R3B-204ENST00000612688 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
PPP4R3B-204ENST00000612688 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
PPP4R3B-204ENST00000612688 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
PPP4R3B-204ENST00000612688 WWC1Q8IX03 1113 aa14.91□□□□□ -0.02
PPP4R3B-204ENST00000612688 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
PPP4R3B-204ENST00000612688 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
PPP4R3B-204ENST00000612688 PCDHB15Q9Y5E8 787 aa14.9□□□□□ -0.02
PPP4R3B-204ENST00000612688 XRN1Q8IZH2 1706 aaKnown RBP14.9□□□□□ -0.02
PPP4R3B-204ENST00000612688 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
PPP4R3B-204ENST00000612688 C19orf44Q9H6X5 657 aa14.89□□□□□ -0.03
PPP4R3B-204ENST00000612688 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
PPP4R3B-204ENST00000612688 E9PSI1 815 aa14.88□□□□□ -0.03
PPP4R3B-204ENST00000612688 PRKAR2BP31323 418 aa14.88□□□□□ -0.03
PPP4R3B-204ENST00000612688 AMPHP49418 695 aa14.88□□□□□ -0.03
PPP4R3B-204ENST00000612688 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
PPP4R3B-204ENST00000612688 XRCC6P12956 609 aaKnown RBP eCLIP14.88□□□□□ -0.03
PPP4R3B-204ENST00000612688 USP19O94966 1318 aa14.88□□□□□ -0.03
PPP4R3B-204ENST00000612688 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
PPP4R3B-204ENST00000612688 ADGRL3Q9HAR2 1447 aa14.87□□□□□ -0.03
PPP4R3B-204ENST00000612688 USP32Q8NFA0 1604 aa14.87□□□□□ -0.03
PPP4R3B-204ENST00000612688 AEBP1Q8IUX7 1158 aa14.86□□□□□ -0.03
PPP4R3B-204ENST00000612688 MAP3K19Q56UN5 1328 aa14.86□□□□□ -0.03
PPP4R3B-204ENST00000612688 L1TD1Q5T7N2 865 aaKnown RBP14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 MAP2P11137 1827 aaKnown RBP14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 PHACTR3Q96KR7 559 aa14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 ADGRB2O60241 1585 aa14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 LMTK3Q96Q04 1460 aa14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 NALCNQ8IZF0 1738 aa14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 PDZRN3Q9UPQ7 1066 aa14.85□□□□□ -0.03
PPP4R3B-204ENST00000612688 ITSN1Q15811 1721 aa14.84□□□□□ -0.03
PPP4R3B-204ENST00000612688 RIPK4P57078 832 aa14.84□□□□□ -0.03
PPP4R3B-204ENST00000612688 SULT6B1Q6IMI4 303 aa14.84□□□□□ -0.03
PPP4R3B-204ENST00000612688 TRMT2AQ8IZ69 625 aaKnown RBP14.84□□□□□ -0.03
PPP4R3B-204ENST00000612688 THUMPD2Q9BTF0 503 aaKnown RBP14.84□□□□□ -0.03
PPP4R3B-204ENST00000612688 KIF20BQ96Q89 1820 aa14.84□□□□□ -0.03
PPP4R3B-204ENST00000612688 EIF4A2Q14240 407 aaKnown RBP14.83□□□□□ -0.03
PPP4R3B-204ENST00000612688 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.03
PPP4R3B-204ENST00000612688 IL13P35225 146 aa14.83□□□□□ -0.04
PPP4R3B-204ENST00000612688 MFAP1P55081 439 aaKnown RBP14.83□□□□□ -0.04
PPP4R3B-204ENST00000612688 TTC21AQ8NDW8 1320 aa14.83□□□□□ -0.04
PPP4R3B-204ENST00000612688 RARSP54136 660 aaKnown RBP14.82□□□□□ -0.04
PPP4R3B-204ENST00000612688 TMPOP42166 694 aaKnown RBP14.82□□□□□ -0.04
PPP4R3B-204ENST00000612688 CABLES1Q8TDN4 633 aa14.82□□□□□ -0.04
PPP4R3B-204ENST00000612688 RBM10P98175 930 aaKnown RBP14.81□□□□□ -0.04
PPP4R3B-204ENST00000612688 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
PPP4R3B-204ENST00000612688 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
PPP4R3B-204ENST00000612688 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
PPP4R3B-204ENST00000612688 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
PPP4R3B-204ENST00000612688 RRP9O43818 475 aaKnown RBP14.8□□□□□ -0.04
PPP4R3B-204ENST00000612688 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
PPP4R3B-204ENST00000612688 BECN1Q14457 450 aa14.8□□□□□ -0.04
PPP4R3B-204ENST00000612688 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
PPP4R3B-204ENST00000612688 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
PPP4R3B-204ENST00000612688 MON2Q7Z3U7 1717 aa14.8□□□□□ -0.04
PPP4R3B-204ENST00000612688 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 OVOS2A0A0J9YW53 1432 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 OVOS2Q6IE36 1432 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 PNPLA6Q8IY17 1366 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 SSH2Q76I76 1423 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 FCHSD2O94868 740 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 CADPS2Q86UW7 1296 aa14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 FTSJ3Q8IY81 847 aaKnown RBP14.79□□□□□ -0.04
PPP4R3B-204ENST00000612688 MSH6P52701 1360 aa14.78□□□□□ -0.04
PPP4R3B-204ENST00000612688 TBC1D2Q9BYX2 928 aa14.78□□□□□ -0.04
PPP4R3B-204ENST00000612688 TOPAZ1Q8N9V7 1692 aa14.78□□□□□ -0.04
PPP4R3B-204ENST00000612688 COL3A1P02461 1466 aaPredicted RBP14.78□□□□□ -0.04
PPP4R3B-204ENST00000612688 FMN2Q9NZ56 1722 aa14.78□□□□□ -0.04
PPP4R3B-204ENST00000612688 AATKQ6ZMQ8 1374 aa14.77□□□□□ -0.04
PPP4R3B-204ENST00000612688 ITPRIPQ8IWB1 547 aa14.77□□□□□ -0.05
PPP4R3B-204ENST00000612688 TRIM44Q96DX7 344 aaPredicted RBP14.77□□□□□ -0.05
PPP4R3B-204ENST00000612688 C1orf167Q5SNV9 1468 aa14.77□□□□□ -0.05
PPP4R3B-204ENST00000612688 ANKRD26Q9UPS8 1709 aa14.76□□□□□ -0.05
PPP4R3B-204ENST00000612688 TRIM35Q9UPQ4 493 aa14.76□□□□□ -0.05
PPP4R3B-204ENST00000612688 ERBB4Q15303 1308 aa14.76□□□□□ -0.05
PPP4R3B-204ENST00000612688 PDE3AQ14432 1141 aa14.76□□□□□ -0.05
PPP4R3B-204ENST00000612688 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 GCP02774 474 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 HOXC9P31274 260 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 EYA1Q99502 592 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms