RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 HIP1O00291 1037 aa10.36□□□□□ -0.75
TMCO1-208ENST00000612311 RALYLQ86SE5 291 aaKnown RBP10.36□□□□□ -0.75
TMCO1-208ENST00000612311 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
TMCO1-208ENST00000612311 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
TMCO1-208ENST00000612311 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
TMCO1-208ENST00000612311 MBD3O95983 291 aa10.36□□□□□ -0.75
TMCO1-208ENST00000612311 XPCQ01831 940 aaPredicted RBP10.36□□□□□ -0.75
TMCO1-208ENST00000612311 TRIM29Q14134 588 aa10.36□□□□□ -0.75
TMCO1-208ENST00000612311 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
TMCO1-208ENST00000612311 CEBPAP49715 358 aaPredicted RBP10.36□□□□□ -0.75
TMCO1-208ENST00000612311 G3V3G9 751 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 DCAF8Q5TAQ9 597 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
TMCO1-208ENST00000612311 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 BTBD11A6QL63 1104 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 NASPP49321 788 aaPredicted RBP10.35□□□□□ -0.75
TMCO1-208ENST00000612311 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
TMCO1-208ENST00000612311 WDR7Q9Y4E6 1490 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
TMCO1-208ENST00000612311 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 IL16Q14005 1332 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 ABCA5Q8WWZ7 1642 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
TMCO1-208ENST00000612311 IGHDP01880 384 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 FBLN1P23142 703 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 MCM4P33991 863 aa10.35□□□□□ -0.75
TMCO1-208ENST00000612311 DNAJC2Q99543 621 aaKnown RBP10.35□□□□□ -0.75
TMCO1-208ENST00000612311 EIF4G3O43432 1585 aaKnown RBP10.34□□□□□ -0.75
TMCO1-208ENST00000612311 ADGRL2O95490 1459 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 ZC3H6P61129 1189 aaKnown RBP10.34□□□□□ -0.75
TMCO1-208ENST00000612311 ZNF518AQ6AHZ1 1483 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 KIF21AQ7Z4S6 1674 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 CABP4P57796 275 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 PDCP20941 246 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 RNF214Q8ND24 703 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 CARD14Q9BXL6 1004 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 SIL1Q9H173 461 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 TEX14Q8IWB6 1497 aa10.34□□□□□ -0.75
TMCO1-208ENST00000612311 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
TMCO1-208ENST00000612311 MYL6BP14649 208 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 FOSBP53539 338 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 TAF7Q15545 349 aaPredicted RBP10.33□□□□□ -0.76
TMCO1-208ENST00000612311 NFXL1Q6ZNB6 911 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
TMCO1-208ENST00000612311 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 CCDC73Q6ZRK6 1079 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 TOM1L2Q6ZVM7 507 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 PRDM11Q9NQV5 511 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 F6X3S4 739 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 CCDC27Q2M243 656 aa10.33□□□□□ -0.76
TMCO1-208ENST00000612311 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
TMCO1-208ENST00000612311 MAP4K4O95819 1239 aaPredicted RBP10.32□□□□□ -0.76
TMCO1-208ENST00000612311 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
TMCO1-208ENST00000612311 ABCC10Q5T3U5 1492 aa10.32□□□□□ -0.76
TMCO1-208ENST00000612311 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
TMCO1-208ENST00000612311 CYP46A1Q9Y6A2 500 aa10.32□□□□□ -0.76
TMCO1-208ENST00000612311 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 ACEP12821 1306 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 TTC21BQ7Z4L5 1316 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 FAM83GA6ND36 823 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 SMARCA5O60264 1052 aaPredicted RBP10.31□□□□□ -0.76
TMCO1-208ENST00000612311 AACSQ86V21 672 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 FAM43AQ8N2R8 423 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 DDX54Q8TDD1 881 aaKnown RBP10.31□□□□□ -0.76
TMCO1-208ENST00000612311 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 FIBPO43427 364 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 FOXO3O43524 673 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 USHBP1Q8N6Y0 703 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 PIK3C2GO75747 1445 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 MAGI3Q5TCQ9 1506 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 EIF2AK4Q9P2K8 1649 aaKnown RBP10.31□□□□□ -0.76
TMCO1-208ENST00000612311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.31□□□□□ -0.76
TMCO1-208ENST00000612311 ERICH2A1L162 156 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 MARCH6O60337 910 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 KIF1BPQ96EK5 621 aa10.31□□□□□ -0.76
TMCO1-208ENST00000612311 NOL10Q9BSC4 688 aaKnown RBP10.31□□□□□ -0.76
TMCO1-208ENST00000612311 KIF6Q6ZMV9 814 aa10.3□□□□□ -0.76
TMCO1-208ENST00000612311 COL17A1Q9UMD9 1497 aaPredicted RBP10.3□□□□□ -0.76
TMCO1-208ENST00000612311 MX1P20591 662 aa10.3□□□□□ -0.76
TMCO1-208ENST00000612311 TPD52L1Q16890 204 aaPredicted RBP10.3□□□□□ -0.76
TMCO1-208ENST00000612311 WDR33Q9C0J8 1336 aaKnown RBP10.3□□□□□ -0.76
TMCO1-208ENST00000612311 SAFBQ15424 915 aaKnown RBP eCLIP10.3□□□□□ -0.76
TMCO1-208ENST00000612311 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
TMCO1-208ENST00000612311 AMOTL1Q8IY63 956 aa10.3□□□□□ -0.76
TMCO1-208ENST00000612311 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
TMCO1-208ENST00000612311 TBC1D2BQ9UPU7 963 aa10.3□□□□□ -0.76
TMCO1-208ENST00000612311 PTPRCP08575 1304 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 HSP90AA2PQ14568 343 aaPredicted RBP10.29□□□□□ -0.76
TMCO1-208ENST00000612311 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
TMCO1-208ENST00000612311 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
TMCO1-208ENST00000612311 FAM177BA6PVY3 158 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 AMOTQ4VCS5 1084 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 ABCC2Q92887 1545 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 FLIIQ13045 1269 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms