RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 TTC21BQ7Z4L5 1316 aa24.13■■□□□ 1.45
SEMA3B-210ENST00000611067 NGDNQ8NEJ9 315 aaKnown RBP24.13■■□□□ 1.45
SEMA3B-210ENST00000611067 FSD2A1L4K1 749 aa24.12■■□□□ 1.45
SEMA3B-210ENST00000611067 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
SEMA3B-210ENST00000611067 GOLGA6L3A6NEY3 463 aa24.11■■□□□ 1.45
SEMA3B-210ENST00000611067 ADGRL3Q9HAR2 1447 aa24.11■■□□□ 1.45
SEMA3B-210ENST00000611067 COL3A1P02461 1466 aaPredicted RBP24.11■■□□□ 1.45
SEMA3B-210ENST00000611067 RWDD1Q9H446 243 aaPredicted RBP24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 RLBP1P12271 317 aa24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 XRCC6P12956 609 aaKnown RBP eCLIP24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 ZRANB1Q9UGI0 708 aa24.1■■□□□ 1.45
SEMA3B-210ENST00000611067 MCM4P33991 863 aa24.09■■□□□ 1.45
SEMA3B-210ENST00000611067 RUNDC1Q96C34 613 aa24.09■■□□□ 1.45
SEMA3B-210ENST00000611067 RBM33Q96EV2 1170 aaKnown RBP24.09■■□□□ 1.45
SEMA3B-210ENST00000611067 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
SEMA3B-210ENST00000611067 C14orf37Q86TY3 774 aa24.09■■□□□ 1.45
SEMA3B-210ENST00000611067 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
SEMA3B-210ENST00000611067 WDR63Q8IWG1 891 aa24.08■■□□□ 1.45
SEMA3B-210ENST00000611067 POLKQ9UBT6 870 aa24.08■■□□□ 1.45
SEMA3B-210ENST00000611067 AATKQ6ZMQ8 1374 aa24.08■■□□□ 1.45
SEMA3B-210ENST00000611067 PNPLA6Q8IY17 1366 aa24.08■■□□□ 1.45
SEMA3B-210ENST00000611067 U2SURPO15042 1029 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-210ENST00000611067 DIAPH1O60610 1272 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-210ENST00000611067 TTC21AQ8NDW8 1320 aa24.07■■□□□ 1.44
SEMA3B-210ENST00000611067 KDM4FA0A1W2PPD8 638 aa24.07■■□□□ 1.44
SEMA3B-210ENST00000611067 SSH2Q76I76 1423 aa24.05■■□□□ 1.44
SEMA3B-210ENST00000611067 FBLN1P23142 703 aa24.05■■□□□ 1.44
SEMA3B-210ENST00000611067 TNNQ9UQP3 1299 aa24.05■■□□□ 1.44
SEMA3B-210ENST00000611067 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
SEMA3B-210ENST00000611067 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
SEMA3B-210ENST00000611067 CHMP5Q9NZZ3 219 aa24.04■■□□□ 1.44
SEMA3B-210ENST00000611067 OVOS2A0A0J9YW53 1432 aa24.04■■□□□ 1.44
SEMA3B-210ENST00000611067 OVOS2Q6IE36 1432 aa24.04■■□□□ 1.44
SEMA3B-210ENST00000611067 HSPA2P54652 639 aa24.03■■□□□ 1.44
SEMA3B-210ENST00000611067 CCDC27Q2M243 656 aa24.03■■□□□ 1.44
SEMA3B-210ENST00000611067 EMILIN1Q9Y6C2 1016 aa24.03■■□□□ 1.44
SEMA3B-210ENST00000611067 PROSER2Q86WR7 435 aaPredicted RBP24.03■■□□□ 1.44
SEMA3B-210ENST00000611067 CDK12Q9NYV4 1490 aaPredicted RBP24.02■■□□□ 1.44
SEMA3B-210ENST00000611067 RRP7AQ9Y3A4 280 aaKnown RBP24.02■■□□□ 1.44
SEMA3B-210ENST00000611067 CLCN1P35523 988 aa24.01■■□□□ 1.43
SEMA3B-210ENST00000611067 C22orf23Q9BZE7 217 aa24.01■■□□□ 1.43
SEMA3B-210ENST00000611067 MVPQ14764 893 aaKnown RBP24■■□□□ 1.43
SEMA3B-210ENST00000611067 BCL2L13Q9BXK5 485 aa24■■□□□ 1.43
SEMA3B-210ENST00000611067 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
SEMA3B-210ENST00000611067 RRS1Q15050 365 aaKnown RBP23.99■■□□□ 1.43
SEMA3B-210ENST00000611067 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
SEMA3B-210ENST00000611067 TRAK2O60296 914 aa23.99■■□□□ 1.43
SEMA3B-210ENST00000611067 SPRYD3Q8NCJ5 442 aa23.99■■□□□ 1.43
SEMA3B-210ENST00000611067 PNNQ9H307 717 aaKnown RBP23.98■■□□□ 1.43
SEMA3B-210ENST00000611067 ARXQ96QS3 562 aa23.98■■□□□ 1.43
SEMA3B-210ENST00000611067 PANK2Q9BZ23 570 aa23.98■■□□□ 1.43
SEMA3B-210ENST00000611067 LMTK3Q96Q04 1460 aa23.97■■□□□ 1.43
SEMA3B-210ENST00000611067 MRE11P49959 708 aa23.97■■□□□ 1.43
SEMA3B-210ENST00000611067 GZF1Q9H116 711 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-210ENST00000611067 MYH16Q9H6N6 1097 aa23.97■■□□□ 1.43
SEMA3B-210ENST00000611067 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
SEMA3B-210ENST00000611067 USP31Q70CQ4 1352 aa23.96■■□□□ 1.43
SEMA3B-210ENST00000611067 PIK3C2AO00443 1686 aa23.95■■□□□ 1.43
SEMA3B-210ENST00000611067 ZKSCAN2Q63HK3 967 aa23.95■■□□□ 1.42
SEMA3B-210ENST00000611067 MFAP1P55081 439 aaKnown RBP23.94■■□□□ 1.42
SEMA3B-210ENST00000611067 ISY1Q9ULR0 285 aaKnown RBP23.94■■□□□ 1.42
SEMA3B-210ENST00000611067 DDX11L8A8MPP1 907 aa23.93■■□□□ 1.42
SEMA3B-210ENST00000611067 DZIP1LQ8IYY4 767 aaKnown RBP23.93■■□□□ 1.42
SEMA3B-210ENST00000611067 PLEKHF1Q96S99 279 aa23.93■■□□□ 1.42
SEMA3B-210ENST00000611067 C19orf44Q9H6X5 657 aa23.93■■□□□ 1.42
SEMA3B-210ENST00000611067 FCHSD2O94868 740 aa23.92■■□□□ 1.42
SEMA3B-210ENST00000611067 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
SEMA3B-210ENST00000611067 FTSJ3Q8IY81 847 aaKnown RBP23.92■■□□□ 1.42
SEMA3B-210ENST00000611067 SOX12O15370 315 aa23.91■■□□□ 1.42
SEMA3B-210ENST00000611067 NLRP6P59044 892 aa23.91■■□□□ 1.42
SEMA3B-210ENST00000611067 HDAC1Q13547 482 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-210ENST00000611067 IL13P35225 146 aa23.91■■□□□ 1.42
SEMA3B-210ENST00000611067 HSCBQ8IWL3 235 aa23.91■■□□□ 1.42
SEMA3B-210ENST00000611067 NAP1L5Q96NT1 182 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-210ENST00000611067 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
SEMA3B-210ENST00000611067 STRCP1A6NGW2 1772 aa23.9■■□□□ 1.42
SEMA3B-210ENST00000611067 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
SEMA3B-210ENST00000611067 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.42
SEMA3B-210ENST00000611067 PSME1Q06323 249 aa23.89■■□□□ 1.42
SEMA3B-210ENST00000611067 TMEM94Q12767 1356 aa23.89■■□□□ 1.41
SEMA3B-210ENST00000611067 GRPEL1Q9HAV7 217 aa23.89■■□□□ 1.41
SEMA3B-210ENST00000611067 USP54Q70EL1 1684 aa23.87■■□□□ 1.41
SEMA3B-210ENST00000611067 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
SEMA3B-210ENST00000611067 PRKAR2BP31323 418 aa23.86■■□□□ 1.41
SEMA3B-210ENST00000611067 DDIT3P35638 169 aa23.86■■□□□ 1.41
SEMA3B-210ENST00000611067 TMPOP42166 694 aaKnown RBP23.86■■□□□ 1.41
SEMA3B-210ENST00000611067 ORAI2Q96SN7 254 aa23.86■■□□□ 1.41
SEMA3B-210ENST00000611067 HMOX1P09601 288 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 ATF3P18847 181 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 NUTM2GQ5VZR2 741 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 DDX19BQ9UMR2 479 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 PEAK1Q9H792 1746 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 GLIPR1L2Q4G1C9 344 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 SMC5Q8IY18 1101 aa23.85■■□□□ 1.41
SEMA3B-210ENST00000611067 DCCP43146 1447 aa23.84■■□□□ 1.41
SEMA3B-210ENST00000611067 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
SEMA3B-210ENST00000611067 SNX21Q969T3 373 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms