RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 NOLC1Q14978 699 aaKnown RBP eCLIP23.82■■□□□ 1.4
COL15A1-205ENST00000610452 ZKSCAN5Q9Y2L8 839 aa23.82■■□□□ 1.4
COL15A1-205ENST00000610452 IGSF3O75054 1194 aa23.82■■□□□ 1.4
COL15A1-205ENST00000610452 EXOSC9Q06265 439 aaKnown RBP23.82■■□□□ 1.4
COL15A1-205ENST00000610452 PPP2R1AP30153 589 aa23.81■■□□□ 1.4
COL15A1-205ENST00000610452 MAP9Q49MG5 647 aa23.81■■□□□ 1.4
COL15A1-205ENST00000610452 TRMT1Q9NXH9 659 aaKnown RBP23.81■■□□□ 1.4
COL15A1-205ENST00000610452 CAMK4Q16566 473 aa23.81■■□□□ 1.4
COL15A1-205ENST00000610452 ARHGAP29Q52LW3 1261 aa23.81■■□□□ 1.4
COL15A1-205ENST00000610452 RNF187Q5TA31 235 aaPredicted RBP23.81■■□□□ 1.4
COL15A1-205ENST00000610452 JPH4Q96JJ6 628 aa23.81■■□□□ 1.4
COL15A1-205ENST00000610452 DACH1Q9UI36 760 aa23.81■■□□□ 1.4
COL15A1-205ENST00000610452 NEMFO60524 1076 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 CTR9Q6PD62 1173 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 NOB1Q9ULX3 412 aaKnown RBP23.8■■□□□ 1.4
COL15A1-205ENST00000610452 TAX1BP1Q86VP1 789 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 MAGEC2Q9UBF1 373 aaPredicted RBP23.8■■□□□ 1.4
COL15A1-205ENST00000610452 EVC2Q86UK5 1308 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 SMTNL1A8MU46 457 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 JMYQ8N9B5 988 aa23.8■■□□□ 1.4
COL15A1-205ENST00000610452 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
COL15A1-205ENST00000610452 CASQ1P31415 396 aa23.79■■□□□ 1.4
COL15A1-205ENST00000610452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.79■■□□□ 1.4
COL15A1-205ENST00000610452 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
COL15A1-205ENST00000610452 SMARCC1Q92922 1105 aaPredicted RBP23.79■■□□□ 1.4
COL15A1-205ENST00000610452 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
COL15A1-205ENST00000610452 UVSSAQ2YD98 709 aa23.78■■□□□ 1.4
COL15A1-205ENST00000610452 CEP135Q66GS9 1140 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 CFAP45Q9UL16 551 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 BAG4O95429 457 aaKnown RBP23.77■■□□□ 1.4
COL15A1-205ENST00000610452 IVLP07476 585 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 EPS15P42566 896 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 ENOX2Q16206 610 aaKnown RBP23.77■■□□□ 1.4
COL15A1-205ENST00000610452 ZSCAN23Q3MJ62 389 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 FBXO3Q9UK99 471 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 CCDC148Q8NFR7 591 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 ANKRD1Q15327 319 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 ERICH2A1L162 156 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 NF2P35240 595 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 FSD1Q9BTV5 496 aa23.77■■□□□ 1.4
COL15A1-205ENST00000610452 CFAP100Q494V2 611 aa23.76■■□□□ 1.39
COL15A1-205ENST00000610452 EPB41L2O43491 1005 aaKnown RBP23.76■■□□□ 1.39
COL15A1-205ENST00000610452 UBTFL1P0CB47 393 aaPredicted RBP23.75■■□□□ 1.39
COL15A1-205ENST00000610452 MCM3P25205 808 aa23.75■■□□□ 1.39
COL15A1-205ENST00000610452 HS1BP3Q53T59 392 aa23.75■■□□□ 1.39
COL15A1-205ENST00000610452 STK3Q13188 491 aa23.74■■□□□ 1.39
COL15A1-205ENST00000610452 C20orf194Q5TEA3 1177 aa23.74■■□□□ 1.39
COL15A1-205ENST00000610452 LTV1Q96GA3 475 aaPredicted RBP23.74■■□□□ 1.39
COL15A1-205ENST00000610452 NEFHP12036 1026 aa23.74■■□□□ 1.39
COL15A1-205ENST00000610452 ATF7IPQ6VMQ6 1270 aa23.74■■□□□ 1.39
COL15A1-205ENST00000610452 ZSCAN31Q96LW9 406 aaPredicted RBP23.74■■□□□ 1.39
COL15A1-205ENST00000610452 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
COL15A1-205ENST00000610452 CLASRPQ8N2M8 674 aaKnown RBP23.73■■□□□ 1.39
COL15A1-205ENST00000610452 ZNF830Q96NB3 372 aaPredicted RBP23.73■■□□□ 1.39
COL15A1-205ENST00000610452 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 RBM27Q9P2N5 1060 aaKnown RBP23.73■■□□□ 1.39
COL15A1-205ENST00000610452 ATP2B1P20020 1258 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 VGLL3A8MV65 326 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 KIF4BQ2VIQ3 1234 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 SURF6O75683 361 aaKnown RBP23.73■■□□□ 1.39
COL15A1-205ENST00000610452 LRSAM1Q6UWE0 723 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 COG3Q96JB2 828 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 FEZ1Q99689 392 aa23.73■■□□□ 1.39
COL15A1-205ENST00000610452 LUC7LQ9NQ29 371 aaKnown RBP23.73■■□□□ 1.39
COL15A1-205ENST00000610452 DHX16O60231 1041 aaKnown RBP23.72■■□□□ 1.39
COL15A1-205ENST00000610452 RASSF4Q9H2L5 321 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 OGFRQ9NZT2 677 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 POTEB2H3BUK9 544 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 GNAI3P08754 354 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 CUX1P39880 1505 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 HIP1O00291 1037 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 KIF5CO60282 957 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 BRMS1Q9HCU9 246 aa23.72■■□□□ 1.39
COL15A1-205ENST00000610452 CSB-PGBD3P0DP91 1061 aa23.71■■□□□ 1.39
COL15A1-205ENST00000610452 SNW1Q13573 536 aaKnown RBP23.71■■□□□ 1.39
COL15A1-205ENST00000610452 TTC31Q49AM3 519 aaPredicted RBP23.71■■□□□ 1.39
COL15A1-205ENST00000610452 RSPH14Q9UHP6 348 aa23.71■■□□□ 1.39
COL15A1-205ENST00000610452 TBC1D32Q96NH3 1257 aa23.71■■□□□ 1.39
COL15A1-205ENST00000610452 TDO2P48775 406 aa23.71■■□□□ 1.39
COL15A1-205ENST00000610452 NGDNQ8NEJ9 315 aaKnown RBP23.71■■□□□ 1.39
COL15A1-205ENST00000610452 NBPF8Q3BBV2 869 aa23.7■■□□□ 1.39
COL15A1-205ENST00000610452 XBP1P17861 261 aa23.7■■□□□ 1.38
COL15A1-205ENST00000610452 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
COL15A1-205ENST00000610452 ANO10Q9NW15 660 aa23.7■■□□□ 1.38
COL15A1-205ENST00000610452 KDM4AO75164 1064 aa23.69■■□□□ 1.38
COL15A1-205ENST00000610452 NUTM2FA1L443 756 aa23.69■■□□□ 1.38
COL15A1-205ENST00000610452 GBP2P32456 591 aaPredicted RBP23.69■■□□□ 1.38
COL15A1-205ENST00000610452 GSDMDP57764 484 aa23.69■■□□□ 1.38
COL15A1-205ENST00000610452 TSR2Q969E8 191 aaKnown RBP23.69■■□□□ 1.38
COL15A1-205ENST00000610452 PDRG1Q9NUG6 133 aa23.69■■□□□ 1.38
COL15A1-205ENST00000610452 C10orf67Q8IYJ2 551 aa23.68■■□□□ 1.38
COL15A1-205ENST00000610452 TEFQ10587 303 aa23.67■■□□□ 1.38
COL15A1-205ENST00000610452 PAXIP1Q6ZW49 1069 aaPredicted RBP23.67■■□□□ 1.38
COL15A1-205ENST00000610452 SEPT7Q16181 437 aaKnown RBP23.67■■□□□ 1.38
COL15A1-205ENST00000610452 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
COL15A1-205ENST00000610452 MAP2K1Q02750 393 aaPredicted RBP23.66■■□□□ 1.38
COL15A1-205ENST00000610452 NCOA2Q15596 1464 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 CCDC171Q6TFL3 1326 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms