RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 VPS72Q15906 364 aa20.53■□□□□ 0.88
CSNK2A1-209ENST00000609606 NPC1L1Q9UHC9 1359 aa20.53■□□□□ 0.88
CSNK2A1-209ENST00000609606 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
CSNK2A1-209ENST00000609606 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
CSNK2A1-209ENST00000609606 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
CSNK2A1-209ENST00000609606 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
CSNK2A1-209ENST00000609606 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
CSNK2A1-209ENST00000609606 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
CSNK2A1-209ENST00000609606 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
CSNK2A1-209ENST00000609606 RXRBP28702 533 aa20.49■□□□□ 0.87
CSNK2A1-209ENST00000609606 GJD4Q96KN9 370 aaPredicted RBP20.49■□□□□ 0.87
CSNK2A1-209ENST00000609606 AXIN2Q9Y2T1 843 aa20.49■□□□□ 0.87
CSNK2A1-209ENST00000609606 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
CSNK2A1-209ENST00000609606 GLI3P10071 1580 aa20.48■□□□□ 0.87
CSNK2A1-209ENST00000609606 BLMP54132 1417 aaPredicted RBP20.48■□□□□ 0.87
CSNK2A1-209ENST00000609606 EVA1CP58658 441 aa20.48■□□□□ 0.87
CSNK2A1-209ENST00000609606 IP6K1Q92551 441 aa20.48■□□□□ 0.87
CSNK2A1-209ENST00000609606 FBLN1P23142 703 aa20.47■□□□□ 0.87
CSNK2A1-209ENST00000609606 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
CSNK2A1-209ENST00000609606 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
CSNK2A1-209ENST00000609606 RRS1Q15050 365 aaKnown RBP20.46■□□□□ 0.87
CSNK2A1-209ENST00000609606 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
CSNK2A1-209ENST00000609606 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
CSNK2A1-209ENST00000609606 PEAK1Q9H792 1746 aa20.45■□□□□ 0.86
CSNK2A1-209ENST00000609606 AMPHP49418 695 aa20.45■□□□□ 0.86
CSNK2A1-209ENST00000609606 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
CSNK2A1-209ENST00000609606 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 HOXC9P31274 260 aa20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 SPATA31A1Q5TZJ5 1347 aa20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 FLT4P35916 1363 aa20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 CRB1P82279 1406 aa20.44■□□□□ 0.86
CSNK2A1-209ENST00000609606 ERBB3P21860 1342 aa20.43■□□□□ 0.86
CSNK2A1-209ENST00000609606 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
CSNK2A1-209ENST00000609606 POLKQ9UBT6 870 aa20.42■□□□□ 0.86
CSNK2A1-209ENST00000609606 SMG6Q86US8 1419 aaKnown RBP20.42■□□□□ 0.86
CSNK2A1-209ENST00000609606 ONECUT3O60422 494 aaPredicted RBP20.41■□□□□ 0.86
CSNK2A1-209ENST00000609606 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
CSNK2A1-209ENST00000609606 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
CSNK2A1-209ENST00000609606 ILDR2Q71H61 639 aa20.41■□□□□ 0.86
CSNK2A1-209ENST00000609606 EMILIN1Q9Y6C2 1016 aa20.41■□□□□ 0.86
CSNK2A1-209ENST00000609606 INSRP06213 1382 aa20.41■□□□□ 0.86
CSNK2A1-209ENST00000609606 ANKRD24Q8TF21 1146 aa20.4■□□□□ 0.86
CSNK2A1-209ENST00000609606 THRAP3Q9Y2W1 955 aaKnown RBP20.4■□□□□ 0.86
CSNK2A1-209ENST00000609606 RGS12O14924 1447 aa20.39■□□□□ 0.85
CSNK2A1-209ENST00000609606 TOM1L2Q6ZVM7 507 aa20.39■□□□□ 0.85
CSNK2A1-209ENST00000609606 CARD10Q9BWT7 1032 aa20.39■□□□□ 0.85
CSNK2A1-209ENST00000609606 CSB-PGBD3P0DP91 1061 aa20.38■□□□□ 0.85
CSNK2A1-209ENST00000609606 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
CSNK2A1-209ENST00000609606 TCP11L2Q8N4U5 519 aa20.38■□□□□ 0.85
CSNK2A1-209ENST00000609606 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
CSNK2A1-209ENST00000609606 HSP90AB2PQ58FF8 381 aa20.37■□□□□ 0.85
CSNK2A1-209ENST00000609606 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
CSNK2A1-209ENST00000609606 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
CSNK2A1-209ENST00000609606 FAM98CQ17RN3 349 aaKnown RBP20.35■□□□□ 0.85
CSNK2A1-209ENST00000609606 USP35Q9P2H5 1018 aa20.35■□□□□ 0.85
CSNK2A1-209ENST00000609606 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
CSNK2A1-209ENST00000609606 BRWD3Q6RI45 1802 aa20.34■□□□□ 0.85
CSNK2A1-209ENST00000609606 PPP4R3CPQ6ZMV5 832 aa20.34■□□□□ 0.85
CSNK2A1-209ENST00000609606 SEPT12Q8IYM1 358 aa20.33■□□□□ 0.85
CSNK2A1-209ENST00000609606 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
CSNK2A1-209ENST00000609606 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.85
CSNK2A1-209ENST00000609606 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
CSNK2A1-209ENST00000609606 CDCA7Q9BWT1 371 aaPredicted RBP20.32■□□□□ 0.84
CSNK2A1-209ENST00000609606 MTHFSP49914 203 aa20.31■□□□□ 0.84
CSNK2A1-209ENST00000609606 PARD3Q8TEW0 1356 aa20.31■□□□□ 0.84
CSNK2A1-209ENST00000609606 DISP2A7MBM2 1401 aa20.3■□□□□ 0.84
CSNK2A1-209ENST00000609606 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
CSNK2A1-209ENST00000609606 NCAPD2Q15021 1401 aa20.28■□□□□ 0.84
CSNK2A1-209ENST00000609606 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
CSNK2A1-209ENST00000609606 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
CSNK2A1-209ENST00000609606 A0A0G2JS52 829 aa20.27■□□□□ 0.84
CSNK2A1-209ENST00000609606 KCNA4P22459 653 aa20.27■□□□□ 0.84
CSNK2A1-209ENST00000609606 MYT1Q01538 1121 aa20.27■□□□□ 0.84
CSNK2A1-209ENST00000609606 EIF4A2Q14240 407 aaKnown RBP20.27■□□□□ 0.84
CSNK2A1-209ENST00000609606 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
CSNK2A1-209ENST00000609606 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
CSNK2A1-209ENST00000609606 RALBP1Q15311 655 aa20.26■□□□□ 0.83
CSNK2A1-209ENST00000609606 IL2RBP14784 551 aa20.25■□□□□ 0.83
CSNK2A1-209ENST00000609606 KRT27Q7Z3Y8 459 aa20.25■□□□□ 0.83
CSNK2A1-209ENST00000609606 EYA1Q99502 592 aa20.24■□□□□ 0.83
CSNK2A1-209ENST00000609606 RGPD1P0DJD0 1748 aa20.24■□□□□ 0.83
CSNK2A1-209ENST00000609606 IL13P35225 146 aa20.23■□□□□ 0.83
CSNK2A1-209ENST00000609606 COL3A1P02461 1466 aaPredicted RBP20.23■□□□□ 0.83
CSNK2A1-209ENST00000609606 EP400Q96L91 3159 aa20.22■□□□□ 0.83
CSNK2A1-209ENST00000609606 DDB1Q16531 1140 aa20.22■□□□□ 0.83
CSNK2A1-209ENST00000609606 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
CSNK2A1-209ENST00000609606 TNS2Q63HR2 1409 aa20.21■□□□□ 0.83
CSNK2A1-209ENST00000609606 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
CSNK2A1-209ENST00000609606 USHBP1Q8N6Y0 703 aa20.2■□□□□ 0.82
CSNK2A1-209ENST00000609606 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
CSNK2A1-209ENST00000609606 MEGF6O75095 1541 aa20.2■□□□□ 0.82
CSNK2A1-209ENST00000609606 PLEKHG2Q9H7P9 1386 aa20.2■□□□□ 0.82
CSNK2A1-209ENST00000609606 OVOS2A0A0G2JMS6 1433 aa20.19■□□□□ 0.82
CSNK2A1-209ENST00000609606 EXOC5O00471 708 aa20.19■□□□□ 0.82
CSNK2A1-209ENST00000609606 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
CSNK2A1-209ENST00000609606 RAPGEF4Q8WZA2 1011 aa20.19■□□□□ 0.82
CSNK2A1-209ENST00000609606 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms