RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 GCP02774 474 aa13.84□□□□□ -0.19
CTCFL-220ENST00000608858 NLGN2Q8NFZ4 835 aa13.84□□□□□ -0.19
CTCFL-220ENST00000608858 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
CTCFL-220ENST00000608858 DLC1Q96QB1 1528 aa13.84□□□□□ -0.19
CTCFL-220ENST00000608858 SBF2Q86WG5 1849 aa13.83□□□□□ -0.2
CTCFL-220ENST00000608858 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
CTCFL-220ENST00000608858 ACEP12821 1306 aa13.83□□□□□ -0.2
CTCFL-220ENST00000608858 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
CTCFL-220ENST00000608858 HSPA6P17066 643 aa13.82□□□□□ -0.2
CTCFL-220ENST00000608858 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
CTCFL-220ENST00000608858 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.22e-8■■■□□ 16
CTCFL-220ENST00000608858 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
CTCFL-220ENST00000608858 PHRF1Q9P1Y6 1649 aaKnown RBP13.8□□□□□ -0.2
CTCFL-220ENST00000608858 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-220ENST00000608858 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
CTCFL-220ENST00000608858 EXOC5O00471 708 aa13.79□□□□□ -0.2
CTCFL-220ENST00000608858 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
CTCFL-220ENST00000608858 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
CTCFL-220ENST00000608858 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
CTCFL-220ENST00000608858 CRB1P82279 1406 aa13.79□□□□□ -0.2
CTCFL-220ENST00000608858 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
CTCFL-220ENST00000608858 COL5A2P05997 1499 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-220ENST00000608858 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
CTCFL-220ENST00000608858 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
CTCFL-220ENST00000608858 POLD1P28340 1107 aa13.77□□□□□ -0.21
CTCFL-220ENST00000608858 ATP7BP35670 1465 aa13.77□□□□□ -0.21
CTCFL-220ENST00000608858 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.21
CTCFL-220ENST00000608858 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
CTCFL-220ENST00000608858 CPDO75976 1380 aa13.76□□□□□ -0.21
CTCFL-220ENST00000608858 KCNQ4P56696 695 aa13.76□□□□□ -0.21
CTCFL-220ENST00000608858 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
CTCFL-220ENST00000608858 SOX12O15370 315 aa13.75□□□□□ -0.21
CTCFL-220ENST00000608858 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
CTCFL-220ENST00000608858 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
CTCFL-220ENST00000608858 NLRP6P59044 892 aa13.75□□□□□ -0.21
CTCFL-220ENST00000608858 MAP3K5Q99683 1374 aa13.74□□□□□ -0.21
CTCFL-220ENST00000608858 RGPD3A6NKT7 1758 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-220ENST00000608858 RGPD4Q7Z3J3 1758 aa13.74□□□□□ -0.21
CTCFL-220ENST00000608858 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
CTCFL-220ENST00000608858 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
CTCFL-220ENST00000608858 LMO7Q8WWI1 1683 aa13.74□□□□□ -0.21
CTCFL-220ENST00000608858 KAT6BQ8WYB5 2073 aa13.74□□□□□ -0.21
CTCFL-220ENST00000608858 USP19O94966 1318 aa13.73□□□□□ -0.21
CTCFL-220ENST00000608858 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-220ENST00000608858 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
CTCFL-220ENST00000608858 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
CTCFL-220ENST00000608858 DCAF11Q8TEB1 546 aa13.71□□□□□ -0.21
CTCFL-220ENST00000608858 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
CTCFL-220ENST00000608858 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
CTCFL-220ENST00000608858 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
CTCFL-220ENST00000608858 CDCA7Q9BWT1 371 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-220ENST00000608858 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-220ENST00000608858 PNPLA7Q6ZV29 1317 aa13.69□□□□□ -0.22
CTCFL-220ENST00000608858 DNAJC5GQ8N7S2 189 aa13.69□□□□□ -0.22
CTCFL-220ENST00000608858 SLC16A10Q8TF71 515 aa13.69□□□□□ -0.22
CTCFL-220ENST00000608858 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
CTCFL-220ENST00000608858 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
CTCFL-220ENST00000608858 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
CTCFL-220ENST00000608858 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
CTCFL-220ENST00000608858 ADGRB1O14514 1584 aa13.67□□□□□ -0.22
CTCFL-220ENST00000608858 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
CTCFL-220ENST00000608858 HTRA3P83110 453 aa13.67□□□□□ -0.22
CTCFL-220ENST00000608858 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
CTCFL-220ENST00000608858 BCL9O00512 1426 aa13.65□□□□□ -0.22
CTCFL-220ENST00000608858 USP6P35125 1406 aa13.65□□□□□ -0.22
CTCFL-220ENST00000608858 KIF3CO14782 793 aa13.65□□□□□ -0.22
CTCFL-220ENST00000608858 APLP1P51693 650 aa13.65□□□□□ -0.22
CTCFL-220ENST00000608858 CABP1Q9NZU7 370 aa13.65□□□□□ -0.22
CTCFL-220ENST00000608858 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
CTCFL-220ENST00000608858 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
CTCFL-220ENST00000608858 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
CTCFL-220ENST00000608858 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
CTCFL-220ENST00000608858 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
CTCFL-220ENST00000608858 SYTL4Q96C24 671 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-220ENST00000608858 NLRP2Q9NX02 1062 aa13.63□□□□□ -0.23
CTCFL-220ENST00000608858 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-220ENST00000608858 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
CTCFL-220ENST00000608858 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-220ENST00000608858 COL18A1P39060 1754 aa13.6□□□□□ -0.23
CTCFL-220ENST00000608858 TOPAZ1Q8N9V7 1692 aa13.6□□□□□ -0.23
CTCFL-220ENST00000608858 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
CTCFL-220ENST00000608858 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
CTCFL-220ENST00000608858 PRELPP51888 382 aa13.59□□□□□ -0.23
CTCFL-220ENST00000608858 SLC27A3Q5K4L6 730 aa13.59□□□□□ -0.23
CTCFL-220ENST00000608858 BTAF1O14981 1849 aa13.59□□□□□ -0.23
CTCFL-220ENST00000608858 IL2RBP14784 551 aa13.58□□□□□ -0.24
CTCFL-220ENST00000608858 CD2APQ9Y5K6 639 aa13.57□□□□□ -0.24
CTCFL-220ENST00000608858 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
CTCFL-220ENST00000608858 ADCY9O60503 1353 aa13.57□□□□□ -0.24
CTCFL-220ENST00000608858 NHSQ6T4R5 1651 aa13.56□□□□□ -0.24
CTCFL-220ENST00000608858 TOMM70O94826 608 aa13.56□□□□□ -0.24
CTCFL-220ENST00000608858 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
CTCFL-220ENST00000608858 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
CTCFL-220ENST00000608858 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
CTCFL-220ENST00000608858 CCDC7Q96M83 1385 aa13.56□□□□□ -0.24
CTCFL-220ENST00000608858 CPSF1Q10570 1443 aaKnown RBP13.56□□□□□ -0.24
CTCFL-220ENST00000608858 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-220ENST00000608858 ARHGEF28Q8N1W1 1705 aaKnown RBP13.55□□□□□ -0.24
CTCFL-220ENST00000608858 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
CTCFL-220ENST00000608858 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms