RNA–Protein interactions for RNA: ENST00000608013.1

AC009237.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC009237.3, Length 3,042 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009237.3-202ENST00000608013 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
AC009237.3-202ENST00000608013 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
AC009237.3-202ENST00000608013 ATF3P18847 181 aa20.33■□□□□ 0.84
AC009237.3-202ENST00000608013 PCDHB15Q9Y5E8 787 aa20.32■□□□□ 0.84
AC009237.3-202ENST00000608013 ZNF692Q9BU19 519 aaPredicted RBP20.32■□□□□ 0.84
AC009237.3-202ENST00000608013 TRIM35Q9UPQ4 493 aa20.32■□□□□ 0.84
AC009237.3-202ENST00000608013 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
AC009237.3-202ENST00000608013 CDC42BPGQ6DT37 1551 aa20.31■□□□□ 0.84
AC009237.3-202ENST00000608013 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
AC009237.3-202ENST00000608013 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
AC009237.3-202ENST00000608013 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
AC009237.3-202ENST00000608013 FOXO3O43524 673 aa20.3■□□□□ 0.84
AC009237.3-202ENST00000608013 NEFMP07197 916 aa20.3■□□□□ 0.84
AC009237.3-202ENST00000608013 ZKSCAN2Q63HK3 967 aa20.3■□□□□ 0.84
AC009237.3-202ENST00000608013 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
AC009237.3-202ENST00000608013 HMOX1P09601 288 aa20.29■□□□□ 0.84
AC009237.3-202ENST00000608013 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 SOX12O15370 315 aa20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 PLEKHG5O94827 1062 aa20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 ANKARQ7Z5J8 1434 aa20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 DZIP1LQ8IYY4 767 aaKnown RBP20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
AC009237.3-202ENST00000608013 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
AC009237.3-202ENST00000608013 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
AC009237.3-202ENST00000608013 DDX17Q92841 729 aaKnown RBP20.27■□□□□ 0.84
AC009237.3-202ENST00000608013 ITSN1Q15811 1721 aa20.27■□□□□ 0.83
AC009237.3-202ENST00000608013 POLKQ9UBT6 870 aa20.27■□□□□ 0.83
AC009237.3-202ENST00000608013 USP6P35125 1406 aa20.26■□□□□ 0.83
AC009237.3-202ENST00000608013 LRRC7Q96NW7 1537 aa20.26■□□□□ 0.83
AC009237.3-202ENST00000608013 MVPQ14764 893 aaKnown RBP20.26■□□□□ 0.83
AC009237.3-202ENST00000608013 MSH6P52701 1360 aa20.26■□□□□ 0.83
AC009237.3-202ENST00000608013 PSME1Q06323 249 aa20.26■□□□□ 0.83
AC009237.3-202ENST00000608013 ITPRIPQ8IWB1 547 aa20.25■□□□□ 0.83
AC009237.3-202ENST00000608013 PNNQ9H307 717 aaKnown RBP20.25■□□□□ 0.83
AC009237.3-202ENST00000608013 EMILIN1Q9Y6C2 1016 aa20.25■□□□□ 0.83
AC009237.3-202ENST00000608013 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
AC009237.3-202ENST00000608013 RWDD1Q9H446 243 aaPredicted RBP20.24■□□□□ 0.83
AC009237.3-202ENST00000608013 AKAP12Q02952 1782 aa20.24■□□□□ 0.83
AC009237.3-202ENST00000608013 NCBP3Q53F19 620 aaKnown RBP20.24■□□□□ 0.83
AC009237.3-202ENST00000608013 TRIM27P14373 513 aa20.23■□□□□ 0.83
AC009237.3-202ENST00000608013 COG3Q96JB2 828 aa20.23■□□□□ 0.83
AC009237.3-202ENST00000608013 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
AC009237.3-202ENST00000608013 IL27Q8NEV9 243 aa20.23■□□□□ 0.83
AC009237.3-202ENST00000608013 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
AC009237.3-202ENST00000608013 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
AC009237.3-202ENST00000608013 NOB1Q9ULX3 412 aaKnown RBP20.22■□□□□ 0.83
AC009237.3-202ENST00000608013 XIRP1Q702N8 1843 aaKnown RBP20.22■□□□□ 0.83
AC009237.3-202ENST00000608013 C1orf167Q5SNV9 1468 aa20.22■□□□□ 0.83
AC009237.3-202ENST00000608013 FCHSD2O94868 740 aa20.22■□□□□ 0.83
AC009237.3-202ENST00000608013 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 AAMPQ13685 434 aa20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 SEC24BO95487 1268 aa20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 PHACTR3Q96KR7 559 aa20.21■□□□□ 0.83
AC009237.3-202ENST00000608013 PNPLA6Q8IY17 1366 aa20.2■□□□□ 0.82
AC009237.3-202ENST00000608013 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
AC009237.3-202ENST00000608013 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
AC009237.3-202ENST00000608013 MST1RQ04912 1400 aa20.19■□□□□ 0.82
AC009237.3-202ENST00000608013 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
AC009237.3-202ENST00000608013 NLRP6P59044 892 aa20.19■□□□□ 0.82
AC009237.3-202ENST00000608013 ATF7IPQ6VMQ6 1270 aa20.19■□□□□ 0.82
AC009237.3-202ENST00000608013 SSH2Q76I76 1423 aa20.18■□□□□ 0.82
AC009237.3-202ENST00000608013 NCOA3Q9Y6Q9 1424 aa20.18■□□□□ 0.82
AC009237.3-202ENST00000608013 IL16Q14005 1332 aa20.18■□□□□ 0.82
AC009237.3-202ENST00000608013 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
AC009237.3-202ENST00000608013 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
AC009237.3-202ENST00000608013 EIF5BO60841 1220 aaKnown RBP20.16■□□□□ 0.82
AC009237.3-202ENST00000608013 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
AC009237.3-202ENST00000608013 UBE2Q2Q8WVN8 375 aa20.16■□□□□ 0.82
AC009237.3-202ENST00000608013 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
AC009237.3-202ENST00000608013 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
AC009237.3-202ENST00000608013 NRKQ7Z2Y5 1582 aa20.15■□□□□ 0.82
AC009237.3-202ENST00000608013 DCCP43146 1447 aa20.15■□□□□ 0.82
AC009237.3-202ENST00000608013 NFE2L2Q16236 605 aa20.14■□□□□ 0.82
AC009237.3-202ENST00000608013 TTC21AQ8NDW8 1320 aa20.14■□□□□ 0.81
AC009237.3-202ENST00000608013 MAP2P11137 1827 aaKnown RBP20.14■□□□□ 0.81
AC009237.3-202ENST00000608013 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
AC009237.3-202ENST00000608013 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
AC009237.3-202ENST00000608013 KIF16BQ96L93 1317 aa20.13■□□□□ 0.81
AC009237.3-202ENST00000608013 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
AC009237.3-202ENST00000608013 IL13P35225 146 aa20.11■□□□□ 0.81
AC009237.3-202ENST00000608013 USP19O94966 1318 aa20.11■□□□□ 0.81
AC009237.3-202ENST00000608013 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
AC009237.3-202ENST00000608013 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
AC009237.3-202ENST00000608013 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
AC009237.3-202ENST00000608013 NFKBIBQ15653 356 aa20.1■□□□□ 0.81
AC009237.3-202ENST00000608013 PIK3C2AO00443 1686 aa20.09■□□□□ 0.81
AC009237.3-202ENST00000608013 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
AC009237.3-202ENST00000608013 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
AC009237.3-202ENST00000608013 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.8
AC009237.3-202ENST00000608013 DCTN1Q14203 1278 aa20.08■□□□□ 0.8
AC009237.3-202ENST00000608013 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
AC009237.3-202ENST00000608013 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
AC009237.3-202ENST00000608013 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
AC009237.3-202ENST00000608013 GNAI1P63096 354 aa20.06■□□□□ 0.8
AC009237.3-202ENST00000608013 MBIPQ9NS73 344 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms