RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
MSH6-211ENST00000606499 RTL1A6NKG5 1358 aa10.41□□□□□ -0.74
MSH6-211ENST00000606499 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
MSH6-211ENST00000606499 MYBBP1AQ9BQG0 1328 aaKnown RBP10.41□□□□□ -0.74
MSH6-211ENST00000606499 RALBP1Q15311 655 aa10.41□□□□□ -0.74
MSH6-211ENST00000606499 ARHGEF25Q86VW2 580 aa10.41□□□□□ -0.74
MSH6-211ENST00000606499 POLKQ9UBT6 870 aa10.41□□□□□ -0.74
MSH6-211ENST00000606499 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.41□□□□□ -0.74
MSH6-211ENST00000606499 FLT4P35916 1363 aa10.4□□□□□ -0.74
MSH6-211ENST00000606499 PPM1GO15355 546 aaPredicted RBP10.4□□□□□ -0.74
MSH6-211ENST00000606499 PRDM11Q9NQV5 511 aa10.4□□□□□ -0.74
MSH6-211ENST00000606499 RGPD1P0DJD0 1748 aa10.4□□□□□ -0.74
MSH6-211ENST00000606499 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
MSH6-211ENST00000606499 FAM83GA6ND36 823 aa10.39□□□□□ -0.75
MSH6-211ENST00000606499 HOXC9P31274 260 aa10.39□□□□□ -0.75
MSH6-211ENST00000606499 MTHFSP49914 203 aa10.39□□□□□ -0.75
MSH6-211ENST00000606499 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
MSH6-211ENST00000606499 KIF24Q5T7B8 1368 aa10.39□□□□□ -0.75
MSH6-211ENST00000606499 SLIT2O94813 1529 aa10.38□□□□□ -0.75
MSH6-211ENST00000606499 WNK3Q9BYP7 1800 aa10.38□□□□□ -0.75
MSH6-211ENST00000606499 AMPHP49418 695 aa10.38□□□□□ -0.75
MSH6-211ENST00000606499 MEX3CQ5U5Q3 659 aaKnown RBP10.38□□□□□ -0.75
MSH6-211ENST00000606499 C8orf37Q96NL8 207 aa10.38□□□□□ -0.75
MSH6-211ENST00000606499 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
MSH6-211ENST00000606499 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
MSH6-211ENST00000606499 MIER1Q8N108 512 aa10.37□□□□□ -0.75
MSH6-211ENST00000606499 IP6K1Q92551 441 aa10.37□□□□□ -0.75
MSH6-211ENST00000606499 INSRP06213 1382 aa10.37□□□□□ -0.75
MSH6-211ENST00000606499 CCDC184Q52MB2 194 aa10.36□□□□□ -0.75
MSH6-211ENST00000606499 BTG4Q9NY30 223 aa10.36□□□□□ -0.75
MSH6-211ENST00000606499 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
MSH6-211ENST00000606499 ERBB3P21860 1342 aa10.35□□□□□ -0.75
MSH6-211ENST00000606499 MSH5O43196 834 aa10.35□□□□□ -0.75
MSH6-211ENST00000606499 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
MSH6-211ENST00000606499 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
MSH6-211ENST00000606499 AFF2P51816 1311 aa10.34□□□□□ -0.75
MSH6-211ENST00000606499 EIF4A2Q14240 407 aaKnown RBP10.34□□□□□ -0.75
MSH6-211ENST00000606499 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
MSH6-211ENST00000606499 CFAP53Q96M91 514 aa10.34□□□□□ -0.75
MSH6-211ENST00000606499 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
MSH6-211ENST00000606499 GLI3P10071 1580 aa10.33□□□□□ -0.76
MSH6-211ENST00000606499 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
MSH6-211ENST00000606499 CRB1P82279 1406 aa10.33□□□□□ -0.76
MSH6-211ENST00000606499 WDR17Q8IZU2 1322 aa10.33□□□□□ -0.76
MSH6-211ENST00000606499 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
MSH6-211ENST00000606499 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
MSH6-211ENST00000606499 FNBP4Q8N3X1 1017 aaPredicted RBP10.32□□□□□ -0.76
MSH6-211ENST00000606499 MRS2Q9HD23 443 aa10.32□□□□□ -0.76
MSH6-211ENST00000606499 NCAPD2Q15021 1401 aa10.32□□□□□ -0.76
MSH6-211ENST00000606499 CSB-PGBD3P0DP91 1061 aa10.31□□□□□ -0.76
MSH6-211ENST00000606499 IL13P35225 146 aa10.31□□□□□ -0.76
MSH6-211ENST00000606499 USHBP1Q8N6Y0 703 aa10.31□□□□□ -0.76
MSH6-211ENST00000606499 USP21Q9UK80 565 aa10.31□□□□□ -0.76
MSH6-211ENST00000606499 ATRNO75882 1429 aa10.31□□□□□ -0.76
MSH6-211ENST00000606499 IGSF1Q8N6C5 1336 aa10.31□□□□□ -0.76
MSH6-211ENST00000606499 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 LRRC37A3O60309 1634 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 U2SURPO15042 1029 aaKnown RBP10.3□□□□□ -0.76
MSH6-211ENST00000606499 EVA1CP58658 441 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 NBPF6Q5VWK0 638 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 UNC5CLQ8IV45 518 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 NBPF4Q96M43 638 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 NLRP2Q9NX02 1062 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 PKD1L3Q7Z443 1732 aa10.3□□□□□ -0.76
MSH6-211ENST00000606499 MEGF6O75095 1541 aa10.29□□□□□ -0.76
MSH6-211ENST00000606499 THSD7AQ9UPZ6 1657 aa10.29□□□□□ -0.76
MSH6-211ENST00000606499 CCER2I3L3R5 266 aa10.29□□□□□ -0.76
MSH6-211ENST00000606499 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
MSH6-211ENST00000606499 EYA1Q99502 592 aa10.29□□□□□ -0.76
MSH6-211ENST00000606499 HMOX1P09601 288 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 USP35Q9P2H5 1018 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 CCDC9Q9Y3X0 531 aaKnown RBP10.28□□□□□ -0.76
MSH6-211ENST00000606499 SPATA31A1Q5TZJ5 1347 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 SPATA31A5Q5VU36 1347 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 SPATA31A7Q8IWB4 1347 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 EP400Q96L91 3159 aa10.28□□□□□ -0.76
MSH6-211ENST00000606499 KDRP35968 1356 aa10.27□□□□□ -0.76
MSH6-211ENST00000606499 DISP2A7MBM2 1401 aa10.27□□□□□ -0.77
MSH6-211ENST00000606499 U2AF1L5P0DN76 240 aaPredicted RBP10.27□□□□□ -0.77
MSH6-211ENST00000606499 U2AF1Q01081 240 aaKnown RBP eCLIP10.27□□□□□ -0.77
MSH6-211ENST00000606499 WDR43Q15061 677 aaKnown RBP eCLIP10.27□□□□□ -0.77
MSH6-211ENST00000606499 VPS72Q15906 364 aa10.27□□□□□ -0.77
MSH6-211ENST00000606499 PNISRQ8TF01 805 aaKnown RBP10.27□□□□□ -0.77
MSH6-211ENST00000606499 CARD10Q9BWT7 1032 aa10.27□□□□□ -0.77
MSH6-211ENST00000606499 RGS17Q9UGC6 210 aaPredicted RBP10.27□□□□□ -0.77
MSH6-211ENST00000606499 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
MSH6-211ENST00000606499 BRWD3Q6RI45 1802 aa10.26□□□□□ -0.77
MSH6-211ENST00000606499 SULT6B1Q6IMI4 303 aa10.26□□□□□ -0.77
MSH6-211ENST00000606499 OVOS2A0A0G2JMS6 1433 aa10.25□□□□□ -0.77
MSH6-211ENST00000606499 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
MSH6-211ENST00000606499 ZNF772Q68DY9 489 aaPredicted RBP10.25□□□□□ -0.77
MSH6-211ENST00000606499 FAM9BQ8IZU0 186 aa10.25□□□□□ -0.77
MSH6-211ENST00000606499 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
MSH6-211ENST00000606499 QTRT2Q9H974 415 aaKnown RBP10.25□□□□□ -0.77
MSH6-211ENST00000606499 TRPC5Q9UL62 973 aaPredicted RBP10.25□□□□□ -0.77
MSH6-211ENST00000606499 ADAMTS8Q9UP79 889 aa10.25□□□□□ -0.77
MSH6-211ENST00000606499 VIRMAQ69YN4 1812 aaKnown RBP10.25□□□□□ -0.77
MSH6-211ENST00000606499 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
MSH6-211ENST00000606499 TCP11L2Q8N4U5 519 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms