RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 ANKRD50Q9ULJ7 1429 aa14.26□□□□□ -0.13
CSNK1A1-209ENST00000606299 KIF15Q9NS87 1388 aa14.26□□□□□ -0.13
CSNK1A1-209ENST00000606299 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
CSNK1A1-209ENST00000606299 SLC27A5Q9Y2P5 690 aa14.26□□□□□ -0.13
CSNK1A1-209ENST00000606299 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
CSNK1A1-209ENST00000606299 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
CSNK1A1-209ENST00000606299 USP46P62068 366 aa14.25□□□□□ -0.13
CSNK1A1-209ENST00000606299 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
CSNK1A1-209ENST00000606299 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 KDM4AO75164 1064 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 LAPTM4AQ15012 233 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 THAP11Q96EK4 314 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 UNC13BO14795 1591 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 GLI2P10070 1586 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
CSNK1A1-209ENST00000606299 FMNL1O95466 1100 aaPredicted RBP14.23□□□□□ -0.13
CSNK1A1-209ENST00000606299 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
CSNK1A1-209ENST00000606299 AMHR2Q16671 573 aa14.23□□□□□ -0.13
CSNK1A1-209ENST00000606299 SIN3AQ96ST3 1273 aa14.23□□□□□ -0.13
CSNK1A1-209ENST00000606299 DUOX2Q9NRD8 1548 aa14.23□□□□□ -0.13
CSNK1A1-209ENST00000606299 DENND4BO75064 1496 aaPredicted RBP14.23□□□□□ -0.13
CSNK1A1-209ENST00000606299 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
CSNK1A1-209ENST00000606299 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
CSNK1A1-209ENST00000606299 PZPP20742 1482 aa14.22□□□□□ -0.13
CSNK1A1-209ENST00000606299 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.13
CSNK1A1-209ENST00000606299 Q3C1V9 767 aa14.21□□□□□ -0.13
CSNK1A1-209ENST00000606299 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.13
CSNK1A1-209ENST00000606299 PPRC1Q5VV67 1664 aaKnown RBP14.2□□□□□ -0.14
CSNK1A1-209ENST00000606299 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
CSNK1A1-209ENST00000606299 RICTORQ6R327 1708 aa14.2□□□□□ -0.14
CSNK1A1-209ENST00000606299 IQGAP3Q86VI3 1631 aa14.19□□□□□ -0.14
CSNK1A1-209ENST00000606299 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
CSNK1A1-209ENST00000606299 BRICD5Q6PL45 260 aa14.19□□□□□ -0.14
CSNK1A1-209ENST00000606299 TTLL12Q14166 644 aaPredicted RBP14.18□□□□□ -0.14
CSNK1A1-209ENST00000606299 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
CSNK1A1-209ENST00000606299 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
CSNK1A1-209ENST00000606299 SLC19A1P41440 591 aa14.17□□□□□ -0.14
CSNK1A1-209ENST00000606299 MSS51Q4VC12 460 aa14.17□□□□□ -0.14
CSNK1A1-209ENST00000606299 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
CSNK1A1-209ENST00000606299 EIF2AK4Q9P2K8 1649 aaKnown RBP14.16□□□□□ -0.14
CSNK1A1-209ENST00000606299 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
CSNK1A1-209ENST00000606299 HOXA2O43364 376 aa14.16□□□□□ -0.14
CSNK1A1-209ENST00000606299 NEO1Q92859 1461 aa14.16□□□□□ -0.14
CSNK1A1-209ENST00000606299 KDM5CP41229 1560 aa14.16□□□□□ -0.14
CSNK1A1-209ENST00000606299 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
CSNK1A1-209ENST00000606299 DEPDC5O75140 1603 aa14.15□□□□□ -0.14
CSNK1A1-209ENST00000606299 ZNF518AQ6AHZ1 1483 aa14.15□□□□□ -0.14
CSNK1A1-209ENST00000606299 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
CSNK1A1-209ENST00000606299 REPIN1Q9BWE0 567 aaKnown RBP14.15□□□□□ -0.14
CSNK1A1-209ENST00000606299 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
CSNK1A1-209ENST00000606299 NUP155O75694 1391 aa14.14□□□□□ -0.15
CSNK1A1-209ENST00000606299 TONSLQ96HA7 1378 aa14.14□□□□□ -0.15
CSNK1A1-209ENST00000606299 RNF19BQ6ZMZ0 732 aa14.14□□□□□ -0.15
CSNK1A1-209ENST00000606299 EMID1Q96A84 441 aaPredicted RBP14.14□□□□□ -0.15
CSNK1A1-209ENST00000606299 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
CSNK1A1-209ENST00000606299 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
CSNK1A1-209ENST00000606299 CEP152O94986 1710 aa14.13□□□□□ -0.15
CSNK1A1-209ENST00000606299 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
CSNK1A1-209ENST00000606299 FAM160A2Q8N612 972 aaPredicted RBP14.13□□□□□ -0.15
CSNK1A1-209ENST00000606299 AK7Q96M32 723 aa14.13□□□□□ -0.15
CSNK1A1-209ENST00000606299 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
CSNK1A1-209ENST00000606299 NRG2O14511 850 aaPredicted RBP14.12□□□□□ -0.15
CSNK1A1-209ENST00000606299 GFRA3O60609 400 aa14.12□□□□□ -0.15
CSNK1A1-209ENST00000606299 SSTR3P32745 418 aaPredicted RBP14.12□□□□□ -0.15
CSNK1A1-209ENST00000606299 SPRYD7Q5W111 196 aa14.11□□□□□ -0.15
CSNK1A1-209ENST00000606299 GIGYF2Q6Y7W6 1299 aaKnown RBP14.11□□□□□ -0.15
CSNK1A1-209ENST00000606299 MAGI2Q86UL8 1455 aa14.11□□□□□ -0.15
CSNK1A1-209ENST00000606299 E9PCH4 1651 aa14.1□□□□□ -0.15
CSNK1A1-209ENST00000606299 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
CSNK1A1-209ENST00000606299 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
CSNK1A1-209ENST00000606299 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
CSNK1A1-209ENST00000606299 FRMPD1Q5SYB0 1578 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 TRIM66O15016 1216 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 Q6ZNB5 142 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 LIAT1Q6ZQX7 453 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 BCANQ96GW7 911 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 TET3O43151 1660 aa14.09□□□□□ -0.15
CSNK1A1-209ENST00000606299 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
CSNK1A1-209ENST00000606299 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
CSNK1A1-209ENST00000606299 ZNF598Q86UK7 904 aaKnown RBP14.08□□□□□ -0.16
CSNK1A1-209ENST00000606299 PRDM9Q9NQV7 894 aa14.08□□□□□ -0.16
CSNK1A1-209ENST00000606299 FCF1Q9Y324 198 aaKnown RBP14.08□□□□□ -0.16
CSNK1A1-209ENST00000606299 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.16
CSNK1A1-209ENST00000606299 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
CSNK1A1-209ENST00000606299 PARP9Q8IXQ6 854 aa14.07□□□□□ -0.16
CSNK1A1-209ENST00000606299 USB1Q9BQ65 265 aaKnown RBP14.07□□□□□ -0.16
CSNK1A1-209ENST00000606299 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
CSNK1A1-209ENST00000606299 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
CSNK1A1-209ENST00000606299 DIP2CQ9Y2E4 1556 aa14.06□□□□□ -0.16
CSNK1A1-209ENST00000606299 MROH1Q8NDA8 1641 aa14.06□□□□□ -0.16
CSNK1A1-209ENST00000606299 HLA-CQ95604 372 aa14.06□□□□□ -0.16
CSNK1A1-209ENST00000606299 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
CSNK1A1-209ENST00000606299 RPIAP49247 311 aa14.05□□□□□ -0.16
CSNK1A1-209ENST00000606299 MMP16P51512 607 aa14.05□□□□□ -0.16
CSNK1A1-209ENST00000606299 A2MP01023 1474 aa14.05□□□□□ -0.16
CSNK1A1-209ENST00000606299 PRDM15P57071 1507 aaPredicted RBP14.05□□□□□ -0.16
CSNK1A1-209ENST00000606299 ZNF697Q5TEC3 545 aa14.04□□□□□ -0.16
CSNK1A1-209ENST00000606299 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms