RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ROBO2Q9HCK4 1378 aa18.58■□□□□ 0.57
HLA-F-230ENST00000606273 FOXO3O43524 673 aa18.58■□□□□ 0.56
HLA-F-230ENST00000606273 SLC34A2O95436 690 aa18.58■□□□□ 0.56
HLA-F-230ENST00000606273 ZNF687Q8N1G0 1237 aa18.58■□□□□ 0.56
HLA-F-230ENST00000606273 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
HLA-F-230ENST00000606273 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
HLA-F-230ENST00000606273 GLI3P10071 1580 aa18.56■□□□□ 0.56
HLA-F-230ENST00000606273 SLIT2O94813 1529 aa18.56■□□□□ 0.56
HLA-F-230ENST00000606273 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
HLA-F-230ENST00000606273 NUP155O75694 1391 aa18.55■□□□□ 0.56
HLA-F-230ENST00000606273 NUDT7P0C024 238 aa18.55■□□□□ 0.56
HLA-F-230ENST00000606273 BAG6P46379 1132 aa18.55■□□□□ 0.56
HLA-F-230ENST00000606273 PCDHGA4Q9Y5G9 962 aa18.55■□□□□ 0.56
HLA-F-230ENST00000606273 RYDENQ9NUL5 291 aaKnown RBP18.54■□□□□ 0.56
HLA-F-230ENST00000606273 PXDNQ92626 1479 aa18.53■□□□□ 0.56
HLA-F-230ENST00000606273 YY1P25490 414 aa18.53■□□□□ 0.56
HLA-F-230ENST00000606273 VPS72Q15906 364 aa18.53■□□□□ 0.56
HLA-F-230ENST00000606273 R3HDM1Q15032 1099 aaKnown RBP18.51■□□□□ 0.55
HLA-F-230ENST00000606273 GPHNQ9NQX3 736 aaPredicted RBP18.51■□□□□ 0.55
HLA-F-230ENST00000606273 IQGAP3Q86VI3 1631 aa18.5■□□□□ 0.55
HLA-F-230ENST00000606273 EN1Q05925 392 aaPredicted RBP18.5■□□□□ 0.55
HLA-F-230ENST00000606273 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
HLA-F-230ENST00000606273 FOXK1P85037 733 aa18.49■□□□□ 0.55
HLA-F-230ENST00000606273 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
HLA-F-230ENST00000606273 PLPP6Q8IY26 295 aa18.48■□□□□ 0.55
HLA-F-230ENST00000606273 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
HLA-F-230ENST00000606273 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
HLA-F-230ENST00000606273 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
HLA-F-230ENST00000606273 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
HLA-F-230ENST00000606273 DSG2Q14126 1118 aa18.46■□□□□ 0.55
HLA-F-230ENST00000606273 PRAG1Q86YV5 1406 aa18.46■□□□□ 0.55
HLA-F-230ENST00000606273 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
HLA-F-230ENST00000606273 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
HLA-F-230ENST00000606273 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
HLA-F-230ENST00000606273 NUTM2FA1L443 756 aa18.45■□□□□ 0.54
HLA-F-230ENST00000606273 LHX6Q9UPM6 363 aa18.45■□□□□ 0.54
HLA-F-230ENST00000606273 ROCK1Q13464 1354 aa18.43■□□□□ 0.54
HLA-F-230ENST00000606273 CABLES1Q8TDN4 633 aa18.43■□□□□ 0.54
HLA-F-230ENST00000606273 KRT28Q7Z3Y7 464 aa18.42■□□□□ 0.54
HLA-F-230ENST00000606273 A0A0G2JS52 829 aa18.41■□□□□ 0.54
HLA-F-230ENST00000606273 GTPBP6O43824 516 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-230ENST00000606273 HAP1P54257 671 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-230ENST00000606273 MYT1Q01538 1121 aa18.41■□□□□ 0.54
HLA-F-230ENST00000606273 PTCD2Q8WV60 388 aaKnown RBP18.41■□□□□ 0.54
HLA-F-230ENST00000606273 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
HLA-F-230ENST00000606273 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
HLA-F-230ENST00000606273 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
HLA-F-230ENST00000606273 FAM182BQ5T319 152 aa18.39■□□□□ 0.53
HLA-F-230ENST00000606273 WAPLQ7Z5K2 1190 aa18.37■□□□□ 0.53
HLA-F-230ENST00000606273 CDC42BPGQ6DT37 1551 aa18.37■□□□□ 0.53
HLA-F-230ENST00000606273 NAIPQ13075 1403 aa18.36■□□□□ 0.53
HLA-F-230ENST00000606273 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
HLA-F-230ENST00000606273 CAMKK2Q96RR4 588 aa18.36■□□□□ 0.53
HLA-F-230ENST00000606273 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
HLA-F-230ENST00000606273 PSME1Q06323 249 aa18.35■□□□□ 0.53
HLA-F-230ENST00000606273 CRISPLD2Q9H0B8 497 aa18.35■□□□□ 0.53
HLA-F-230ENST00000606273 CCDC144AA2RUR9 1427 aa18.34■□□□□ 0.53
HLA-F-230ENST00000606273 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
HLA-F-230ENST00000606273 STK26Q9P289 416 aa18.33■□□□□ 0.52
HLA-F-230ENST00000606273 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
HLA-F-230ENST00000606273 ANKRD13DQ6ZTN6 518 aa18.32■□□□□ 0.52
HLA-F-230ENST00000606273 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
HLA-F-230ENST00000606273 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
HLA-F-230ENST00000606273 ITGAEP38570 1179 aa18.3■□□□□ 0.52
HLA-F-230ENST00000606273 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
HLA-F-230ENST00000606273 TBC1D12O60347 775 aa18.28■□□□□ 0.52
HLA-F-230ENST00000606273 TRIM37O94972 964 aa18.28■□□□□ 0.52
HLA-F-230ENST00000606273 LSM11P83369 360 aaKnown RBP eCLIP18.28■□□□□ 0.52
HLA-F-230ENST00000606273 POTEEQ6S8J3 1075 aa18.28■□□□□ 0.52
HLA-F-230ENST00000606273 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
HLA-F-230ENST00000606273 PLEKHH1Q9ULM0 1364 aa18.28■□□□□ 0.52
HLA-F-230ENST00000606273 NWD2Q9ULI1 1742 aa18.27■□□□□ 0.52
HLA-F-230ENST00000606273 APBA3O96018 575 aa18.27■□□□□ 0.52
HLA-F-230ENST00000606273 PBX2P40425 430 aa18.27■□□□□ 0.52
HLA-F-230ENST00000606273 SPATA31A5Q5VU36 1347 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 SPATA31A7Q8IWB4 1347 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
HLA-F-230ENST00000606273 PPP1R15BQ5SWA1 713 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 ABCC11Q96J66 1382 aa18.26■□□□□ 0.51
HLA-F-230ENST00000606273 TECPR2O15040 1411 aa18.25■□□□□ 0.51
HLA-F-230ENST00000606273 PDE4AP27815 886 aa18.25■□□□□ 0.51
HLA-F-230ENST00000606273 RNF166Q96A37 237 aaPredicted RBP18.25■□□□□ 0.51
HLA-F-230ENST00000606273 PPP1R1BQ9UD71 204 aaPredicted RBP18.25■□□□□ 0.51
HLA-F-230ENST00000606273 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
HLA-F-230ENST00000606273 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
HLA-F-230ENST00000606273 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
HLA-F-230ENST00000606273 NBPF8Q3BBV2 869 aa18.24■□□□□ 0.51
HLA-F-230ENST00000606273 NBPF14Q5TI25 921 aa18.24■□□□□ 0.51
HLA-F-230ENST00000606273 TMEM132EQ6IEE7 984 aa18.24■□□□□ 0.51
HLA-F-230ENST00000606273 SPON1Q9HCB6 807 aa18.24■□□□□ 0.51
HLA-F-230ENST00000606273 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
HLA-F-230ENST00000606273 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
HLA-F-230ENST00000606273 KCNQ2O43526 872 aa18.23■□□□□ 0.51
HLA-F-230ENST00000606273 OXER1Q8TDS5 423 aa18.22■□□□□ 0.51
HLA-F-230ENST00000606273 ZNF784Q8NCA9 323 aaPredicted RBP18.21■□□□□ 0.51
HLA-F-230ENST00000606273 SIRT1Q96EB6 747 aa18.21■□□□□ 0.51
HLA-F-230ENST00000606273 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms