RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 COL5A2P05997 1499 aaPredicted RBP20.04■□□□□ 0.8
TUBE1-208ENST00000604743 MYOM1P52179 1685 aa20.03■□□□□ 0.8
TUBE1-208ENST00000604743 LTN1O94822 1766 aa20.03■□□□□ 0.8
TUBE1-208ENST00000604743 COG3Q96JB2 828 aa20.01■□□□□ 0.79
TUBE1-208ENST00000604743 OVOS2A0A0J9YW53 1432 aa20.01■□□□□ 0.79
TUBE1-208ENST00000604743 OVOS2Q6IE36 1432 aa20.01■□□□□ 0.79
TUBE1-208ENST00000604743 CSB-PGBD3P0DP91 1061 aa20■□□□□ 0.79
TUBE1-208ENST00000604743 TOM1L2Q6ZVM7 507 aa20■□□□□ 0.79
TUBE1-208ENST00000604743 EP400Q96L91 3159 aa19.99■□□□□ 0.79
TUBE1-208ENST00000604743 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
TUBE1-208ENST00000604743 GGNBP2Q9H3C7 697 aa19.99■□□□□ 0.79
TUBE1-208ENST00000604743 THSD7AQ9UPZ6 1657 aa19.99■□□□□ 0.79
TUBE1-208ENST00000604743 KIF20BQ96Q89 1820 aa19.99■□□□□ 0.79
TUBE1-208ENST00000604743 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
TUBE1-208ENST00000604743 CRB1P82279 1406 aa19.98■□□□□ 0.79
TUBE1-208ENST00000604743 FYB1O15117 783 aa19.97■□□□□ 0.79
TUBE1-208ENST00000604743 FBLN1P23142 703 aa19.97■□□□□ 0.79
TUBE1-208ENST00000604743 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
TUBE1-208ENST00000604743 NSD3Q9BZ95 1437 aa19.96■□□□□ 0.79
TUBE1-208ENST00000604743 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
TUBE1-208ENST00000604743 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
TUBE1-208ENST00000604743 THRAP3Q9Y2W1 955 aaKnown RBP19.95■□□□□ 0.78
TUBE1-208ENST00000604743 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
TUBE1-208ENST00000604743 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
TUBE1-208ENST00000604743 CCDC125Q86Z20 511 aa19.92■□□□□ 0.78
TUBE1-208ENST00000604743 ABCC6O95255 1503 aa19.92■□□□□ 0.78
TUBE1-208ENST00000604743 AMPHP49418 695 aa19.91■□□□□ 0.78
TUBE1-208ENST00000604743 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
TUBE1-208ENST00000604743 ANKRD24Q8TF21 1146 aa19.91■□□□□ 0.78
TUBE1-208ENST00000604743 LTV1Q96GA3 475 aaPredicted RBP19.91■□□□□ 0.78
TUBE1-208ENST00000604743 WNK3Q9BYP7 1800 aa19.9■□□□□ 0.78
TUBE1-208ENST00000604743 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
TUBE1-208ENST00000604743 IP6K1Q92551 441 aa19.9■□□□□ 0.78
TUBE1-208ENST00000604743 CARD10Q9BWT7 1032 aa19.9■□□□□ 0.78
TUBE1-208ENST00000604743 NLRP2Q9NX02 1062 aa19.9■□□□□ 0.78
TUBE1-208ENST00000604743 MAP3K19Q56UN5 1328 aa19.9■□□□□ 0.78
TUBE1-208ENST00000604743 BLMP54132 1417 aaPredicted RBP19.9■□□□□ 0.78
TUBE1-208ENST00000604743 PARP4Q9UKK3 1724 aaKnown RBP19.9■□□□□ 0.78
TUBE1-208ENST00000604743 ERBB3P21860 1342 aa19.89■□□□□ 0.77
TUBE1-208ENST00000604743 PANK3Q9H999 370 aa19.89■□□□□ 0.77
TUBE1-208ENST00000604743 CGNL1Q0VF96 1302 aa19.87■□□□□ 0.77
TUBE1-208ENST00000604743 HOXC9P31274 260 aa19.87■□□□□ 0.77
TUBE1-208ENST00000604743 DEFB132Q7Z7B7 95 aa19.87■□□□□ 0.77
TUBE1-208ENST00000604743 DDB1Q16531 1140 aa19.86■□□□□ 0.77
TUBE1-208ENST00000604743 FAM196AQ6ZSG2 479 aa19.86■□□□□ 0.77
TUBE1-208ENST00000604743 CCDC7Q96M83 1385 aa19.85■□□□□ 0.77
TUBE1-208ENST00000604743 KIF7Q2M1P5 1343 aa19.85■□□□□ 0.77
TUBE1-208ENST00000604743 LRRC37A3O60309 1634 aa19.85■□□□□ 0.77
TUBE1-208ENST00000604743 RGPD2P0DJD1 1756 aa19.85■□□□□ 0.77
TUBE1-208ENST00000604743 RGPD1P0DJD0 1748 aa19.85■□□□□ 0.77
TUBE1-208ENST00000604743 MAP2P11137 1827 aaKnown RBP19.84■□□□□ 0.77
TUBE1-208ENST00000604743 CDCA7Q9BWT1 371 aaPredicted RBP19.84■□□□□ 0.77
TUBE1-208ENST00000604743 TRIM37O94972 964 aa19.83■□□□□ 0.77
TUBE1-208ENST00000604743 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
TUBE1-208ENST00000604743 EXOC5O00471 708 aa19.81■□□□□ 0.76
TUBE1-208ENST00000604743 PPM1GO15355 546 aaPredicted RBP19.81■□□□□ 0.76
TUBE1-208ENST00000604743 TNNT2P45379 298 aaPredicted RBP19.81■□□□□ 0.76
TUBE1-208ENST00000604743 BAG6P46379 1132 aa19.81■□□□□ 0.76
TUBE1-208ENST00000604743 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
TUBE1-208ENST00000604743 PEAK1Q9H792 1746 aa19.8■□□□□ 0.76
TUBE1-208ENST00000604743 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
TUBE1-208ENST00000604743 EMILIN1Q9Y6C2 1016 aa19.8■□□□□ 0.76
TUBE1-208ENST00000604743 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
TUBE1-208ENST00000604743 RTL1A6NKG5 1358 aa19.8■□□□□ 0.76
TUBE1-208ENST00000604743 TNS1Q9HBL0 1735 aaKnown RBP19.79■□□□□ 0.76
TUBE1-208ENST00000604743 IL2RBP14784 551 aa19.79■□□□□ 0.76
TUBE1-208ENST00000604743 HSP90AB2PQ58FF8 381 aa19.79■□□□□ 0.76
TUBE1-208ENST00000604743 EN1Q05925 392 aaPredicted RBP19.78■□□□□ 0.76
TUBE1-208ENST00000604743 MARCH10Q8NA82 808 aaPredicted RBP19.78■□□□□ 0.76
TUBE1-208ENST00000604743 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
TUBE1-208ENST00000604743 OVOS2A0A0G2JMS6 1433 aa19.77■□□□□ 0.76
TUBE1-208ENST00000604743 SBF2Q86WG5 1849 aa19.77■□□□□ 0.76
TUBE1-208ENST00000604743 FLT4P35916 1363 aa19.77■□□□□ 0.76
TUBE1-208ENST00000604743 APBA3O96018 575 aa19.76■□□□□ 0.75
TUBE1-208ENST00000604743 USHBP1Q8N6Y0 703 aa19.76■□□□□ 0.75
TUBE1-208ENST00000604743 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
TUBE1-208ENST00000604743 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
TUBE1-208ENST00000604743 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
TUBE1-208ENST00000604743 INSRP06213 1382 aa19.74■□□□□ 0.75
TUBE1-208ENST00000604743 TNS2Q63HR2 1409 aa19.74■□□□□ 0.75
TUBE1-208ENST00000604743 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
TUBE1-208ENST00000604743 POLKQ9UBT6 870 aa19.73■□□□□ 0.75
TUBE1-208ENST00000604743 WASHC2AQ641Q2 1341 aa19.73■□□□□ 0.75
TUBE1-208ENST00000604743 KIF24Q5T7B8 1368 aa19.72■□□□□ 0.75
TUBE1-208ENST00000604743 EZH2Q15910 746 aaKnown RBP19.72■□□□□ 0.75
TUBE1-208ENST00000604743 NSD2O96028 1365 aa19.71■□□□□ 0.75
TUBE1-208ENST00000604743 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
TUBE1-208ENST00000604743 DDX54Q8TDD1 881 aaKnown RBP19.7■□□□□ 0.74
TUBE1-208ENST00000604743 PTF1AQ7RTS3 328 aa19.69■□□□□ 0.74
TUBE1-208ENST00000604743 ACSBG1Q96GR2 724 aa19.69■□□□□ 0.74
TUBE1-208ENST00000604743 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
TUBE1-208ENST00000604743 RAPGEF4Q8WZA2 1011 aa19.68■□□□□ 0.74
TUBE1-208ENST00000604743 CAMKK2Q96RR4 588 aa19.68■□□□□ 0.74
TUBE1-208ENST00000604743 MEGF6O75095 1541 aa19.67■□□□□ 0.74
TUBE1-208ENST00000604743 CC2D1BQ5T0F9 858 aaKnown RBP19.67■□□□□ 0.74
TUBE1-208ENST00000604743 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
TUBE1-208ENST00000604743 ZCRB1Q8TBF4 217 aaKnown RBP19.66■□□□□ 0.74
TUBE1-208ENST00000604743 BCL11BQ9C0K0 894 aaPredicted RBP19.66■□□□□ 0.74
TUBE1-208ENST00000604743 PER1O15534 1290 aaPredicted RBP19.65■□□□□ 0.74
TUBE1-208ENST00000604743 KCNQ2O43526 872 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms