RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
HCG18-247ENST00000602698 NUP188Q5SRE5 1749 aa13.59□□□□□ -0.23
HCG18-247ENST00000602698 EN1Q05925 392 aaPredicted RBP13.59□□□□□ -0.23
HCG18-247ENST00000602698 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
HCG18-247ENST00000602698 KCNH5Q8NCM2 988 aa13.58□□□□□ -0.24
HCG18-247ENST00000602698 RGPD3A6NKT7 1758 aaPredicted RBP13.58□□□□□ -0.24
HCG18-247ENST00000602698 RGPD4Q7Z3J3 1758 aa13.58□□□□□ -0.24
HCG18-247ENST00000602698 TRIM37O94972 964 aa13.57□□□□□ -0.24
HCG18-247ENST00000602698 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
HCG18-247ENST00000602698 AXIN2Q9Y2T1 843 aa13.57□□□□□ -0.24
HCG18-247ENST00000602698 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
HCG18-247ENST00000602698 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
HCG18-247ENST00000602698 SOX12O15370 315 aa13.56□□□□□ -0.24
HCG18-247ENST00000602698 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
HCG18-247ENST00000602698 TOM1L2Q6ZVM7 507 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 TMC1Q8TDI8 760 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 A0A1W2PP64 1363 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 OVOS2A0A0J9YW53 1432 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 OVOS2Q6IE36 1432 aa13.55□□□□□ -0.24
HCG18-247ENST00000602698 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
HCG18-247ENST00000602698 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
HCG18-247ENST00000602698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
HCG18-247ENST00000602698 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
HCG18-247ENST00000602698 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
HCG18-247ENST00000602698 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
HCG18-247ENST00000602698 NME9Q86XW9 330 aa13.53□□□□□ -0.24
HCG18-247ENST00000602698 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
HCG18-247ENST00000602698 TESK2Q96S53 571 aa13.53□□□□□ -0.24
HCG18-247ENST00000602698 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
HCG18-247ENST00000602698 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
HCG18-247ENST00000602698 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
HCG18-247ENST00000602698 APBA3O96018 575 aa13.52□□□□□ -0.25
HCG18-247ENST00000602698 C11orf95C9JLR9 678 aaPredicted RBP13.51□□□□□ -0.25
HCG18-247ENST00000602698 DDB1Q16531 1140 aa13.51□□□□□ -0.25
HCG18-247ENST00000602698 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
HCG18-247ENST00000602698 TERF2IPQ9NYB0 399 aa13.51□□□□□ -0.25
HCG18-247ENST00000602698 KIF20BQ96Q89 1820 aa13.5□□□□□ -0.25
HCG18-247ENST00000602698 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
HCG18-247ENST00000602698 CSB-PGBD3P0DP91 1061 aa13.5□□□□□ -0.25
HCG18-247ENST00000602698 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
HCG18-247ENST00000602698 BCL9O00512 1426 aa13.49□□□□□ -0.25
HCG18-247ENST00000602698 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
HCG18-247ENST00000602698 USP47Q96K76 1375 aa13.49□□□□□ -0.25
HCG18-247ENST00000602698 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
HCG18-247ENST00000602698 MYOM1P52179 1685 aa13.49□□□□□ -0.25
HCG18-247ENST00000602698 RGPD2P0DJD1 1756 aa13.48□□□□□ -0.25
HCG18-247ENST00000602698 ERBB3P21860 1342 aa13.48□□□□□ -0.25
HCG18-247ENST00000602698 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
HCG18-247ENST00000602698 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
HCG18-247ENST00000602698 ADRA2BP18089 450 aa13.48□□□□□ -0.25
HCG18-247ENST00000602698 KAT6BQ8WYB5 2073 aa13.48□□□□□ -0.25
HCG18-247ENST00000602698 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
HCG18-247ENST00000602698 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
HCG18-247ENST00000602698 BTAF1O14981 1849 aa13.44□□□□□ -0.26
HCG18-247ENST00000602698 TMF1P82094 1093 aa13.44□□□□□ -0.26
HCG18-247ENST00000602698 ANKRD24Q8TF21 1146 aa13.44□□□□□ -0.26
HCG18-247ENST00000602698 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
HCG18-247ENST00000602698 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
HCG18-247ENST00000602698 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
HCG18-247ENST00000602698 EXOC5O00471 708 aa13.43□□□□□ -0.26
HCG18-247ENST00000602698 PLSCR1O15162 318 aa13.43□□□□□ -0.26
HCG18-247ENST00000602698 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
HCG18-247ENST00000602698 NLRP2Q9NX02 1062 aa13.43□□□□□ -0.26
HCG18-247ENST00000602698 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
HCG18-247ENST00000602698 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
HCG18-247ENST00000602698 COG3Q96JB2 828 aa13.42□□□□□ -0.26
HCG18-247ENST00000602698 IL2RBP14784 551 aa13.41□□□□□ -0.26
HCG18-247ENST00000602698 IP6K1Q92551 441 aa13.41□□□□□ -0.26
HCG18-247ENST00000602698 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
HCG18-247ENST00000602698 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
HCG18-247ENST00000602698 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
HCG18-247ENST00000602698 CDCA8Q53HL2 280 aa13.39□□□□□ -0.27
HCG18-247ENST00000602698 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
HCG18-247ENST00000602698 ANKRD26Q9UPS8 1709 aa13.39□□□□□ -0.27
HCG18-247ENST00000602698 PAPPAQ13219 1627 aa13.39□□□□□ -0.27
HCG18-247ENST00000602698 HOXC9P31274 260 aa13.38□□□□□ -0.27
HCG18-247ENST00000602698 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
HCG18-247ENST00000602698 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
HCG18-247ENST00000602698 MAP2P11137 1827 aaKnown RBP13.37□□□□□ -0.27
HCG18-247ENST00000602698 FYB1O15117 783 aa13.37□□□□□ -0.27
HCG18-247ENST00000602698 FBLN1P23142 703 aa13.37□□□□□ -0.27
HCG18-247ENST00000602698 AMPHP49418 695 aa13.37□□□□□ -0.27
HCG18-247ENST00000602698 PROM2Q8N271 834 aa13.37□□□□□ -0.27
HCG18-247ENST00000602698 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
HCG18-247ENST00000602698 KCNQ2O43526 872 aa13.36□□□□□ -0.27
HCG18-247ENST00000602698 GGNBP2Q9H3C7 697 aa13.36□□□□□ -0.27
HCG18-247ENST00000602698 MEGF6O75095 1541 aa13.35□□□□□ -0.27
HCG18-247ENST00000602698 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
HCG18-247ENST00000602698 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
HCG18-247ENST00000602698 ACSBG1Q96GR2 724 aa13.35□□□□□ -0.27
HCG18-247ENST00000602698 NSD3Q9BZ95 1437 aa13.35□□□□□ -0.27
HCG18-247ENST00000602698 LY75O60449 1722 aa13.35□□□□□ -0.27
HCG18-247ENST00000602698 QSER1Q2KHR3 1735 aa13.35□□□□□ -0.27
HCG18-247ENST00000602698 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
HCG18-247ENST00000602698 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
HCG18-247ENST00000602698 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.28
HCG18-247ENST00000602698 SPON1Q9HCB6 807 aa13.33□□□□□ -0.28
HCG18-247ENST00000602698 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms