RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 NME9Q86XW9 330 aa21.41■■□□□ 1.02
LTBP4-229ENST00000601032 SIRT1Q96EB6 747 aa21.41■■□□□ 1.02
LTBP4-229ENST00000601032 PLEKHF1Q96S99 279 aa21.41■■□□□ 1.02
LTBP4-229ENST00000601032 NAP1L2Q9ULW6 460 aaPredicted RBP21.41■■□□□ 1.02
LTBP4-229ENST00000601032 TERF1P54274 439 aa21.4■■□□□ 1.02
LTBP4-229ENST00000601032 BBXQ8WY36 941 aaPredicted RBP21.4■■□□□ 1.02
LTBP4-229ENST00000601032 SKAP1Q86WV1 359 aa21.39■■□□□ 1.02
LTBP4-229ENST00000601032 PROSER2Q86WR7 435 aaPredicted RBP21.39■■□□□ 1.01
LTBP4-229ENST00000601032 IPO4Q8TEX9 1081 aaKnown RBP21.39■■□□□ 1.01
LTBP4-229ENST00000601032 CDC42BPGQ6DT37 1551 aa21.38■■□□□ 1.01
LTBP4-229ENST00000601032 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
LTBP4-229ENST00000601032 UTP14CQ5TAP6 766 aaKnown RBP21.38■■□□□ 1.01
LTBP4-229ENST00000601032 POLKQ9UBT6 870 aa21.38■■□□□ 1.01
LTBP4-229ENST00000601032 MAP2P11137 1827 aaKnown RBP21.37■■□□□ 1.01
LTBP4-229ENST00000601032 MON2Q7Z3U7 1717 aa21.37■■□□□ 1.01
LTBP4-229ENST00000601032 FSD2A1L4K1 749 aa21.37■■□□□ 1.01
LTBP4-229ENST00000601032 AKAP12Q02952 1782 aa21.37■■□□□ 1.01
LTBP4-229ENST00000601032 CANXP27824 592 aaKnown RBP21.36■■□□□ 1.01
LTBP4-229ENST00000601032 XIRP1Q702N8 1843 aaKnown RBP21.36■■□□□ 1.01
LTBP4-229ENST00000601032 TMEM94Q12767 1356 aa21.36■■□□□ 1.01
LTBP4-229ENST00000601032 EDC4Q6P2E9 1401 aaKnown RBP21.36■■□□□ 1.01
LTBP4-229ENST00000601032 LTBP4Q8N2S1 1624 aa21.35■■□□□ 1.01
LTBP4-229ENST00000601032 LRRC7Q96NW7 1537 aa21.35■■□□□ 1.01
LTBP4-229ENST00000601032 NUTM2FA1L443 756 aa21.35■■□□□ 1.01
LTBP4-229ENST00000601032 GTF2E1P29083 439 aaPredicted RBP21.35■■□□□ 1.01
LTBP4-229ENST00000601032 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
LTBP4-229ENST00000601032 NALCNQ8IZF0 1738 aa21.35■■□□□ 1.01
LTBP4-229ENST00000601032 CCDC61Q9Y6R9 512 aa21.34■■□□□ 1.01
LTBP4-229ENST00000601032 MTERF4Q7Z6M4 381 aaKnown RBP21.34■■□□□ 1.01
LTBP4-229ENST00000601032 WDR63Q8IWG1 891 aa21.34■■□□□ 1.01
LTBP4-229ENST00000601032 EMILIN1Q9Y6C2 1016 aa21.34■■□□□ 1.01
LTBP4-229ENST00000601032 GOLGA6L3A6NEY3 463 aa21.33■■□□□ 1.01
LTBP4-229ENST00000601032 DIAPH1O60610 1272 aaKnown RBP21.33■■□□□ 1.01
LTBP4-229ENST00000601032 XRCC6P12956 609 aaKnown RBP eCLIP21.33■■□□□ 1.016e-6■□□□□ 9.5
LTBP4-229ENST00000601032 TRIM35Q9UPQ4 493 aa21.33■■□□□ 1
LTBP4-229ENST00000601032 ITSN1Q15811 1721 aa21.32■■□□□ 1
LTBP4-229ENST00000601032 ESPNB1AK53 854 aa21.32■■□□□ 1
LTBP4-229ENST00000601032 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
LTBP4-229ENST00000601032 TOPAZ1Q8N9V7 1692 aa21.3■■□□□ 1
LTBP4-229ENST00000601032 C14orf37Q86TY3 774 aa21.3■■□□□ 1
LTBP4-229ENST00000601032 ISY1Q9ULR0 285 aaKnown RBP21.3■■□□□ 1
LTBP4-229ENST00000601032 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.29■■□□□ 1
LTBP4-229ENST00000601032 TNNQ9UQP3 1299 aa21.29■■□□□ 1
LTBP4-229ENST00000601032 KDM2BQ8NHM5 1336 aa21.28■■□□□ 1
LTBP4-229ENST00000601032 ADGRL3Q9HAR2 1447 aa21.28■■□□□ 1
LTBP4-229ENST00000601032 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
LTBP4-229ENST00000601032 TSR2Q969E8 191 aaKnown RBP21.28■■□□□ 1
LTBP4-229ENST00000601032 SLC4A3P48751 1232 aa21.27■■□□□ 1
LTBP4-229ENST00000601032 RRS1Q15050 365 aaKnown RBP21.27■■□□□ 1
LTBP4-229ENST00000601032 NRKQ7Z2Y5 1582 aa21.26■□□□□ 0.99
LTBP4-229ENST00000601032 PANK1Q8TE04 598 aa21.26■□□□□ 0.99
LTBP4-229ENST00000601032 BCL2L13Q9BXK5 485 aa21.26■□□□□ 0.99
LTBP4-229ENST00000601032 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
LTBP4-229ENST00000601032 ACEP12821 1306 aa21.25■□□□□ 0.99
LTBP4-229ENST00000601032 MRE11P49959 708 aa21.25■□□□□ 0.99
LTBP4-229ENST00000601032 HMOX1P09601 288 aa21.24■□□□□ 0.99
LTBP4-229ENST00000601032 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
LTBP4-229ENST00000601032 IL13P35225 146 aa21.24■□□□□ 0.99
LTBP4-229ENST00000601032 RGPD8O14715 1765 aaPredicted RBP21.23■□□□□ 0.99
LTBP4-229ENST00000601032 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
LTBP4-229ENST00000601032 RIPK4P57078 832 aa21.23■□□□□ 0.99
LTBP4-229ENST00000601032 COG3Q96JB2 828 aa21.23■□□□□ 0.99
LTBP4-229ENST00000601032 PHACTR3Q96KR7 559 aa21.23■□□□□ 0.99
LTBP4-229ENST00000601032 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
LTBP4-229ENST00000601032 TTC21BQ7Z4L5 1316 aa21.22■□□□□ 0.99
LTBP4-229ENST00000601032 AATKQ6ZMQ8 1374 aa21.22■□□□□ 0.99
LTBP4-229ENST00000601032 NCOA3Q9Y6Q9 1424 aa21.22■□□□□ 0.99
LTBP4-229ENST00000601032 CDK12Q9NYV4 1490 aaPredicted RBP21.22■□□□□ 0.99
LTBP4-229ENST00000601032 PLEKHG3A1L390 1219 aa21.21■□□□□ 0.99
LTBP4-229ENST00000601032 MYH16Q9H6N6 1097 aa21.21■□□□□ 0.99
LTBP4-229ENST00000601032 FCHSD2O94868 740 aa21.21■□□□□ 0.99
LTBP4-229ENST00000601032 RLBP1P12271 317 aa21.21■□□□□ 0.99
LTBP4-229ENST00000601032 FAM161AQ3B820 660 aa21.21■□□□□ 0.99
LTBP4-229ENST00000601032 ZNF692Q9BU19 519 aaPredicted RBP21.21■□□□□ 0.99
LTBP4-229ENST00000601032 COG6Q9Y2V7 657 aa21.21■□□□□ 0.99
LTBP4-229ENST00000601032 DMTNQ08495 405 aa21.2■□□□□ 0.98
LTBP4-229ENST00000601032 MSH6P52701 1360 aa21.2■□□□□ 0.98
LTBP4-229ENST00000601032 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
LTBP4-229ENST00000601032 PMFBP1Q8TBY8 1022 aa21.19■□□□□ 0.98
LTBP4-229ENST00000601032 FMN2Q9NZ56 1722 aa21.19■□□□□ 0.98
LTBP4-229ENST00000601032 USP6P35125 1406 aa21.19■□□□□ 0.98
LTBP4-229ENST00000601032 ARXQ96QS3 562 aa21.19■□□□□ 0.98
LTBP4-229ENST00000601032 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
LTBP4-229ENST00000601032 KIAA1211Q6ZU35 1233 aa21.17■□□□□ 0.98
LTBP4-229ENST00000601032 OVOS2A0A0J9YW53 1432 aa21.17■□□□□ 0.98
LTBP4-229ENST00000601032 OVOS2Q6IE36 1432 aa21.17■□□□□ 0.98
LTBP4-229ENST00000601032 SSH2Q76I76 1423 aa21.17■□□□□ 0.98
LTBP4-229ENST00000601032 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
LTBP4-229ENST00000601032 PEAK1Q9H792 1746 aa21.16■□□□□ 0.98
LTBP4-229ENST00000601032 IGHDP01880 384 aa21.16■□□□□ 0.98
LTBP4-229ENST00000601032 ATF3P18847 181 aa21.16■□□□□ 0.98
LTBP4-229ENST00000601032 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
LTBP4-229ENST00000601032 CHMP4BQ9H444 224 aaKnown RBP21.15■□□□□ 0.98
LTBP4-229ENST00000601032 VIRMAQ69YN4 1812 aaKnown RBP21.14■□□□□ 0.98
LTBP4-229ENST00000601032 DCCP43146 1447 aa21.14■□□□□ 0.98
LTBP4-229ENST00000601032 MST1RQ04912 1400 aa21.14■□□□□ 0.97
LTBP4-229ENST00000601032 KIF20AO95235 890 aa21.14■□□□□ 0.97
LTBP4-229ENST00000601032 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.14■□□□□ 0.97
LTBP4-229ENST00000601032 IL16Q14005 1332 aa21.13■□□□□ 0.97
LTBP4-229ENST00000601032 OFD1O75665 1012 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms