RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 MON2Q7Z3U7 1717 aa21.89■■□□□ 1.1
IRF3-226ENST00000600453 THSD7AQ9UPZ6 1657 aa21.89■■□□□ 1.1
IRF3-226ENST00000600453 SOX12O15370 315 aa21.89■■□□□ 1.09
IRF3-226ENST00000600453 CD163L1Q9NR16 1453 aa21.89■■□□□ 1.09
IRF3-226ENST00000600453 NME9Q86XW9 330 aa21.88■■□□□ 1.09
IRF3-226ENST00000600453 CDCA7Q9BWT1 371 aaPredicted RBP21.87■■□□□ 1.09
IRF3-226ENST00000600453 AXIN2Q9Y2T1 843 aa21.87■■□□□ 1.09
IRF3-226ENST00000600453 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
IRF3-226ENST00000600453 WDR17Q8IZU2 1322 aa21.86■■□□□ 1.09
IRF3-226ENST00000600453 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
IRF3-226ENST00000600453 FAM182BQ5T319 152 aa21.85■■□□□ 1.09
IRF3-226ENST00000600453 DEFB132Q7Z7B7 95 aa21.85■■□□□ 1.09
IRF3-226ENST00000600453 CARD10Q9BWT7 1032 aa21.83■■□□□ 1.09
IRF3-226ENST00000600453 COL18A1P39060 1754 aa21.83■■□□□ 1.09
IRF3-226ENST00000600453 COG3Q96JB2 828 aa21.82■■□□□ 1.08
IRF3-226ENST00000600453 DDB1Q16531 1140 aa21.81■■□□□ 1.08
IRF3-226ENST00000600453 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
IRF3-226ENST00000600453 ABCC6O95255 1503 aa21.8■■□□□ 1.08
IRF3-226ENST00000600453 NFAT5O94916 1531 aa21.8■■□□□ 1.08
IRF3-226ENST00000600453 USP54Q70EL1 1684 aa21.79■■□□□ 1.08
IRF3-226ENST00000600453 TRIM37O94972 964 aa21.79■■□□□ 1.08
IRF3-226ENST00000600453 RGPD1P0DJD0 1748 aa21.78■■□□□ 1.08
IRF3-226ENST00000600453 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
IRF3-226ENST00000600453 EN1Q05925 392 aaPredicted RBP21.77■■□□□ 1.08
IRF3-226ENST00000600453 EXOC5O00471 708 aa21.76■■□□□ 1.07
IRF3-226ENST00000600453 PARP4Q9UKK3 1724 aaKnown RBP21.75■■□□□ 1.07
IRF3-226ENST00000600453 OVOS2A0A0J9YW53 1432 aa21.75■■□□□ 1.07
IRF3-226ENST00000600453 OVOS2Q6IE36 1432 aa21.75■■□□□ 1.07
IRF3-226ENST00000600453 RGPD5Q99666 1765 aa21.75■■□□□ 1.07
IRF3-226ENST00000600453 APBA3O96018 575 aa21.75■■□□□ 1.07
IRF3-226ENST00000600453 IP6K1Q92551 441 aa21.75■■□□□ 1.07
IRF3-226ENST00000600453 DISP2A7MBM2 1401 aa21.74■■□□□ 1.07
IRF3-226ENST00000600453 EIF4G2P78344 907 aaKnown RBP eCLIP21.74■■□□□ 1.07
IRF3-226ENST00000600453 NLRP2Q9NX02 1062 aa21.74■■□□□ 1.07
IRF3-226ENST00000600453 ERBB3P21860 1342 aa21.73■■□□□ 1.07
IRF3-226ENST00000600453 FYB1O15117 783 aa21.72■■□□□ 1.07
IRF3-226ENST00000600453 ANKRD24Q8TF21 1146 aa21.72■■□□□ 1.07
IRF3-226ENST00000600453 PARD3Q8TEW0 1356 aa21.72■■□□□ 1.07
IRF3-226ENST00000600453 OVOS2A0A0G2JMS6 1433 aa21.72■■□□□ 1.07
IRF3-226ENST00000600453 AMPHP49418 695 aa21.71■■□□□ 1.07
IRF3-226ENST00000600453 LTN1O94822 1766 aa21.7■■□□□ 1.06
IRF3-226ENST00000600453 CAMKK2Q96RR4 588 aa21.7■■□□□ 1.06
IRF3-226ENST00000600453 EZH2Q15910 746 aaKnown RBP21.69■■□□□ 1.06
IRF3-226ENST00000600453 IL2RBP14784 551 aa21.68■■□□□ 1.06
IRF3-226ENST00000600453 GGNBP2Q9H3C7 697 aa21.68■■□□□ 1.06
IRF3-226ENST00000600453 MARCH10Q8NA82 808 aaPredicted RBP21.67■■□□□ 1.06
IRF3-226ENST00000600453 MAP3K19Q56UN5 1328 aa21.66■■□□□ 1.06
IRF3-226ENST00000600453 BCL11BQ9C0K0 894 aaPredicted RBP21.66■■□□□ 1.06
IRF3-226ENST00000600453 BCL9O00512 1426 aa21.65■■□□□ 1.06
IRF3-226ENST00000600453 HOXC9P31274 260 aa21.65■■□□□ 1.06
IRF3-226ENST00000600453 TNS1Q9HBL0 1735 aaKnown RBP21.65■■□□□ 1.06
IRF3-226ENST00000600453 PLSCR1O15162 318 aa21.64■■□□□ 1.05
IRF3-226ENST00000600453 HSPA5P11021 654 aaKnown RBP21.64■■□□□ 1.05
IRF3-226ENST00000600453 NBPF14Q5TI25 921 aa21.64■■□□□ 1.05
IRF3-226ENST00000600453 LTV1Q96GA3 475 aaPredicted RBP21.64■■□□□ 1.05
IRF3-226ENST00000600453 LRRC37A3O60309 1634 aa21.63■■□□□ 1.05
IRF3-226ENST00000600453 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
IRF3-226ENST00000600453 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
IRF3-226ENST00000600453 WNK3Q9BYP7 1800 aa21.63■■□□□ 1.05
IRF3-226ENST00000600453 RTL1A6NKG5 1358 aa21.61■■□□□ 1.05
IRF3-226ENST00000600453 CGNL1Q0VF96 1302 aa21.61■■□□□ 1.05
IRF3-226ENST00000600453 FBLN1P23142 703 aa21.61■■□□□ 1.05
IRF3-226ENST00000600453 RRS1Q15050 365 aaKnown RBP21.6■■□□□ 1.05
IRF3-226ENST00000600453 PEAK1Q9H792 1746 aa21.6■■□□□ 1.05
IRF3-226ENST00000600453 KIF24Q5T7B8 1368 aa21.6■■□□□ 1.05
IRF3-226ENST00000600453 PSDA5PKW4 1024 aaPredicted RBP21.59■■□□□ 1.05
IRF3-226ENST00000600453 TNS2Q63HR2 1409 aa21.59■■□□□ 1.05
IRF3-226ENST00000600453 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
IRF3-226ENST00000600453 FAM208AQ9UK61 1670 aaKnown RBP21.58■■□□□ 1.05
IRF3-226ENST00000600453 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
IRF3-226ENST00000600453 SMG6Q86US8 1419 aaKnown RBP21.57■■□□□ 1.04
IRF3-226ENST00000600453 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
IRF3-226ENST00000600453 KIF20BQ96Q89 1820 aa21.56■■□□□ 1.04
IRF3-226ENST00000600453 MYOM1P52179 1685 aa21.55■■□□□ 1.04
IRF3-226ENST00000600453 KAT6BQ8WYB5 2073 aa21.55■■□□□ 1.04
IRF3-226ENST00000600453 INSRP06213 1382 aa21.54■■□□□ 1.04
IRF3-226ENST00000600453 FLT4P35916 1363 aa21.54■■□□□ 1.04
IRF3-226ENST00000600453 HSP90AB2PQ58FF8 381 aa21.52■■□□□ 1.04
IRF3-226ENST00000600453 NBPF6Q5VWK0 638 aa21.52■■□□□ 1.04
IRF3-226ENST00000600453 ZCRB1Q8TBF4 217 aaKnown RBP21.52■■□□□ 1.04
IRF3-226ENST00000600453 DDX54Q8TDD1 881 aaKnown RBP21.52■■□□□ 1.04
IRF3-226ENST00000600453 NBPF4Q96M43 638 aa21.52■■□□□ 1.04
IRF3-226ENST00000600453 PANK3Q9H999 370 aa21.52■■□□□ 1.04
IRF3-226ENST00000600453 RAPGEF4Q8WZA2 1011 aa21.51■■□□□ 1.03
IRF3-226ENST00000600453 PTF1AQ7RTS3 328 aa21.5■■□□□ 1.03
IRF3-226ENST00000600453 RREB1Q92766 1687 aa21.5■■□□□ 1.03
IRF3-226ENST00000600453 RGPD3A6NKT7 1758 aaPredicted RBP21.49■■□□□ 1.03
IRF3-226ENST00000600453 RGPD4Q7Z3J3 1758 aa21.49■■□□□ 1.03
IRF3-226ENST00000600453 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
IRF3-226ENST00000600453 KCNQ2O43526 872 aa21.49■■□□□ 1.03
IRF3-226ENST00000600453 ACSBG1Q96GR2 724 aa21.49■■□□□ 1.03
IRF3-226ENST00000600453 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
IRF3-226ENST00000600453 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
IRF3-226ENST00000600453 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
IRF3-226ENST00000600453 TXNRD1Q16881 649 aa21.47■■□□□ 1.03
IRF3-226ENST00000600453 PROM2Q8N271 834 aa21.46■■□□□ 1.03
IRF3-226ENST00000600453 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
IRF3-226ENST00000600453 SRCAPQ6ZRS2 3230 aa21.45■■□□□ 1.02
IRF3-226ENST00000600453 POLKQ9UBT6 870 aa21.45■■□□□ 1.02
IRF3-226ENST00000600453 NUP188Q5SRE5 1749 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms