RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 OVOS2Q6IE36 1432 aa26.87■■□□□ 1.89
FARP1-229ENST00000600190 NUP188Q5SRE5 1749 aa26.87■■□□□ 1.89
FARP1-229ENST00000600190 WDR17Q8IZU2 1322 aa26.87■■□□□ 1.89
FARP1-229ENST00000600190 CPSF1Q10570 1443 aaKnown RBP26.85■■□□□ 1.89
FARP1-229ENST00000600190 AKAP12Q02952 1782 aa26.85■■□□□ 1.89
FARP1-229ENST00000600190 TTC21AQ8NDW8 1320 aa26.85■■□□□ 1.89
FARP1-229ENST00000600190 KTN1Q86UP2 1357 aaKnown RBP26.84■■□□□ 1.89
FARP1-229ENST00000600190 CSB-PGBD3P0DP91 1061 aa26.84■■□□□ 1.89
FARP1-229ENST00000600190 LRRC37A3O60309 1634 aa26.83■■□□□ 1.89
FARP1-229ENST00000600190 PEAK1Q9H792 1746 aa26.82■■□□□ 1.88
FARP1-229ENST00000600190 CDCA7Q9BWT1 371 aaPredicted RBP26.81■■□□□ 1.88
FARP1-229ENST00000600190 RGPD5Q99666 1765 aa26.81■■□□□ 1.88
FARP1-229ENST00000600190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.79■■□□□ 1.88
FARP1-229ENST00000600190 MARCH10Q8NA82 808 aaPredicted RBP26.79■■□□□ 1.88
FARP1-229ENST00000600190 CARD10Q9BWT7 1032 aa26.79■■□□□ 1.88
FARP1-229ENST00000600190 SBF2Q86WG5 1849 aa26.79■■□□□ 1.88
FARP1-229ENST00000600190 PLSCR1O15162 318 aa26.78■■□□□ 1.88
FARP1-229ENST00000600190 PTF1AQ7RTS3 328 aa26.78■■□□□ 1.88
FARP1-229ENST00000600190 CARD11Q9BXL7 1154 aa26.78■■□□□ 1.88
FARP1-229ENST00000600190 BCL11BQ9C0K0 894 aaPredicted RBP26.78■■□□□ 1.88
FARP1-229ENST00000600190 WNK3Q9BYP7 1800 aa26.77■■□□□ 1.88
FARP1-229ENST00000600190 TMC1Q8TDI8 760 aa26.76■■□□□ 1.87
FARP1-229ENST00000600190 NFAT5O94916 1531 aa26.75■■□□□ 1.87
FARP1-229ENST00000600190 EXOC5O00471 708 aa26.74■■□□□ 1.87
FARP1-229ENST00000600190 SBNO2Q9Y2G9 1366 aa26.73■■□□□ 1.87
FARP1-229ENST00000600190 SPON1Q9HCB6 807 aa26.73■■□□□ 1.87
FARP1-229ENST00000600190 MON2Q7Z3U7 1717 aa26.73■■□□□ 1.87
FARP1-229ENST00000600190 KCNQ2O43526 872 aa26.72■■□□□ 1.87
FARP1-229ENST00000600190 NME9Q86XW9 330 aa26.72■■□□□ 1.87
FARP1-229ENST00000600190 PPP1R1BQ9UD71 204 aaPredicted RBP26.72■■□□□ 1.87
FARP1-229ENST00000600190 RGPD3A6NKT7 1758 aaPredicted RBP26.71■■□□□ 1.87
FARP1-229ENST00000600190 RGPD4Q7Z3J3 1758 aa26.71■■□□□ 1.87
FARP1-229ENST00000600190 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
FARP1-229ENST00000600190 HDGFL2Q7Z4V5 671 aaPredicted RBP26.7■■□□□ 1.86
FARP1-229ENST00000600190 BCL9O00512 1426 aa26.69■■□□□ 1.86
FARP1-229ENST00000600190 SLC12A5Q9H2X9 1139 aa26.69■■□□□ 1.86
FARP1-229ENST00000600190 USP31Q70CQ4 1352 aa26.69■■□□□ 1.86
FARP1-229ENST00000600190 CD163L1Q9NR16 1453 aa26.68■■□□□ 1.86
FARP1-229ENST00000600190 PROM2Q8N271 834 aa26.68■■□□□ 1.86
FARP1-229ENST00000600190 ANO8Q9HCE9 1232 aaPredicted RBP26.68■■□□□ 1.86
FARP1-229ENST00000600190 NLRP2Q9NX02 1062 aa26.67■■□□□ 1.86
FARP1-229ENST00000600190 TONSLQ96HA7 1378 aa26.67■■□□□ 1.86
FARP1-229ENST00000600190 ABCC6O95255 1503 aa26.66■■□□□ 1.86
FARP1-229ENST00000600190 TERF2IPQ9NYB0 399 aa26.64■■□□□ 1.86
FARP1-229ENST00000600190 ERBB3P21860 1342 aa26.64■■□□□ 1.85
FARP1-229ENST00000600190 TXNRD1Q16881 649 aa26.63■■□□□ 1.85
FARP1-229ENST00000600190 LTN1O94822 1766 aa26.63■■□□□ 1.85
FARP1-229ENST00000600190 TNS2Q63HR2 1409 aa26.63■■□□□ 1.85
FARP1-229ENST00000600190 PDGFDQ9GZP0 370 aaPredicted RBP26.62■■□□□ 1.85
FARP1-229ENST00000600190 USP54Q70EL1 1684 aa26.61■■□□□ 1.85
FARP1-229ENST00000600190 ANKRD24Q8TF21 1146 aa26.61■■□□□ 1.85
FARP1-229ENST00000600190 EDC4Q6P2E9 1401 aaKnown RBP26.61■■□□□ 1.85
FARP1-229ENST00000600190 IL2RBP14784 551 aa26.6■■□□□ 1.85
FARP1-229ENST00000600190 ACSBG1Q96GR2 724 aa26.6■■□□□ 1.85
FARP1-229ENST00000600190 A0A1W2PP64 1363 aa26.59■■□□□ 1.85
FARP1-229ENST00000600190 STK32BQ9NY57 414 aa26.59■■□□□ 1.85
FARP1-229ENST00000600190 ZBTB7AO95365 584 aa26.58■■□□□ 1.85
FARP1-229ENST00000600190 CASZ1Q86V15 1759 aa26.57■■□□□ 1.84
FARP1-229ENST00000600190 DCAF8L1A6NGE4 600 aa26.57■■□□□ 1.84
FARP1-229ENST00000600190 PUS7Q96PZ0 661 aaKnown RBP26.57■■□□□ 1.84
FARP1-229ENST00000600190 NINLQ9Y2I6 1382 aa26.57■■□□□ 1.84
FARP1-229ENST00000600190 SLC15A2Q16348 729 aa26.56■■□□□ 1.84
FARP1-229ENST00000600190 YY1P25490 414 aa26.55■■□□□ 1.84
FARP1-229ENST00000600190 ATF5Q9Y2D1 282 aaPredicted RBP26.54■■□□□ 1.84
FARP1-229ENST00000600190 NHSQ6T4R5 1651 aa26.54■■□□□ 1.84
FARP1-229ENST00000600190 ST20-MTHFSA0A0A6YYL1 179 aa26.53■■□□□ 1.84
FARP1-229ENST00000600190 LTV1Q96GA3 475 aaPredicted RBP26.53■■□□□ 1.84
FARP1-229ENST00000600190 CCER1Q8TC90 406 aaPredicted RBP26.52■■□□□ 1.84
FARP1-229ENST00000600190 IP6K1Q92551 441 aa26.52■■□□□ 1.84
FARP1-229ENST00000600190 TESK2Q96S53 571 aa26.51■■□□□ 1.83
FARP1-229ENST00000600190 CLSPNQ9HAW4 1339 aa26.49■■□□□ 1.83
FARP1-229ENST00000600190 PTGER2P43116 358 aa26.49■■□□□ 1.83
FARP1-229ENST00000600190 COG3Q96JB2 828 aa26.49■■□□□ 1.83
FARP1-229ENST00000600190 KAT6BQ8WYB5 2073 aa26.48■■□□□ 1.83
FARP1-229ENST00000600190 DDX54Q8TDD1 881 aaKnown RBP26.48■■□□□ 1.83
FARP1-229ENST00000600190 SLC24A1O60721 1099 aa26.46■■□□□ 1.83
FARP1-229ENST00000600190 FBLN1P23142 703 aa26.46■■□□□ 1.83
FARP1-229ENST00000600190 MYOM1P52179 1685 aa26.45■■□□□ 1.82
FARP1-229ENST00000600190 BTAF1O14981 1849 aa26.45■■□□□ 1.82
FARP1-229ENST00000600190 MTFR1LQ9H019 292 aa26.45■■□□□ 1.82
FARP1-229ENST00000600190 AMPHP49418 695 aa26.44■■□□□ 1.82
FARP1-229ENST00000600190 MAP3K19Q56UN5 1328 aa26.43■■□□□ 1.82
FARP1-229ENST00000600190 HOXC9P31274 260 aa26.43■■□□□ 1.82
FARP1-229ENST00000600190 FHDC1Q9C0D6 1143 aaPredicted RBP26.41■■□□□ 1.82
FARP1-229ENST00000600190 LRRC4BQ9NT99 713 aa26.41■■□□□ 1.82
FARP1-229ENST00000600190 FAM208AQ9UK61 1670 aaKnown RBP26.41■■□□□ 1.82
FARP1-229ENST00000600190 UTRNP46939 3433 aa26.4■■□□□ 1.82
FARP1-229ENST00000600190 SYTL4Q96C24 671 aaPredicted RBP26.4■■□□□ 1.82
FARP1-229ENST00000600190 ZNF827Q17R98 1081 aa26.39■■□□□ 1.82
FARP1-229ENST00000600190 ANKRD36BQ8N2N9 1353 aa26.38■■□□□ 1.81
FARP1-229ENST00000600190 SYT17Q9BSW7 474 aa26.38■■□□□ 1.81
FARP1-229ENST00000600190 PAPPAQ13219 1627 aa26.38■■□□□ 1.81
FARP1-229ENST00000600190 TMF1P82094 1093 aa26.37■■□□□ 1.81
FARP1-229ENST00000600190 SGIP1Q9BQI5 828 aa26.37■■□□□ 1.81
FARP1-229ENST00000600190 RRS1Q15050 365 aaKnown RBP26.36■■□□□ 1.81
FARP1-229ENST00000600190 PRIM1P49642 420 aaKnown RBP26.35■■□□□ 1.81
FARP1-229ENST00000600190 ZCRB1Q8TBF4 217 aaKnown RBP26.35■■□□□ 1.81
FARP1-229ENST00000600190 GGNBP2Q9H3C7 697 aa26.35■■□□□ 1.81
FARP1-229ENST00000600190 RGPD2P0DJD1 1756 aa26.35■■□□□ 1.81
FARP1-229ENST00000600190 FYB1O15117 783 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms