RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 PPP2R1AP30153 589 aa25.67■■□□□ 1.7
COPE-209ENST00000599964 HOXC9P31274 260 aa25.67■■□□□ 1.7
COPE-209ENST00000599964 SMG6Q86US8 1419 aaKnown RBP25.67■■□□□ 1.7
COPE-209ENST00000599964 BTG4Q9NY30 223 aa25.67■■□□□ 1.7
COPE-209ENST00000599964 NWD2Q9ULI1 1742 aa25.67■■□□□ 1.7
COPE-209ENST00000599964 LMO7Q8WWI1 1683 aa25.67■■□□□ 1.7
COPE-209ENST00000599964 DIEXFQ68CQ4 756 aaKnown RBP25.66■■□□□ 1.7
COPE-209ENST00000599964 FNBP4Q8N3X1 1017 aaPredicted RBP25.66■■□□□ 1.7
COPE-209ENST00000599964 COL18A1P39060 1754 aa25.66■■□□□ 1.7
COPE-209ENST00000599964 MYBBP1AQ9BQG0 1328 aaKnown RBP25.65■■□□□ 1.7
COPE-209ENST00000599964 SLIT2O94813 1529 aa25.65■■□□□ 1.7
COPE-209ENST00000599964 MTHFSP49914 203 aa25.65■■□□□ 1.7
COPE-209ENST00000599964 EVA1CP58658 441 aa25.65■■□□□ 1.7
COPE-209ENST00000599964 AFF2P51816 1311 aa25.64■■□□□ 1.7
COPE-209ENST00000599964 CDK12Q9NYV4 1490 aaPredicted RBP25.64■■□□□ 1.69
COPE-209ENST00000599964 CFAP53Q96M91 514 aa25.63■■□□□ 1.69
COPE-209ENST00000599964 PHF23Q9BUL5 403 aaPredicted RBP25.63■■□□□ 1.69
COPE-209ENST00000599964 USP21Q9UK80 565 aa25.63■■□□□ 1.69
COPE-209ENST00000599964 INSRP06213 1382 aa25.63■■□□□ 1.69
COPE-209ENST00000599964 CAMTA1Q9Y6Y1 1673 aa25.63■■□□□ 1.69
COPE-209ENST00000599964 PEAK1Q9H792 1746 aa25.63■■□□□ 1.69
COPE-209ENST00000599964 AXIN2Q9Y2T1 843 aa25.62■■□□□ 1.69
COPE-209ENST00000599964 UNC5CLQ8IV45 518 aa25.61■■□□□ 1.69
COPE-209ENST00000599964 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
COPE-209ENST00000599964 RGPD5Q99666 1765 aa25.6■■□□□ 1.69
COPE-209ENST00000599964 CSB-PGBD3P0DP91 1061 aa25.6■■□□□ 1.69
COPE-209ENST00000599964 HSP90AB2PQ58FF8 381 aa25.6■■□□□ 1.69
COPE-209ENST00000599964 ZNF772Q68DY9 489 aaPredicted RBP25.6■■□□□ 1.69
COPE-209ENST00000599964 STRN4Q9NRL3 753 aa25.6■■□□□ 1.69
COPE-209ENST00000599964 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.6■■□□□ 1.69
COPE-209ENST00000599964 ANKRD24Q8TF21 1146 aa25.59■■□□□ 1.69
COPE-209ENST00000599964 NRAPQ86VF7 1730 aa25.58■■□□□ 1.69
COPE-209ENST00000599964 BCL9LQ86UU0 1499 aa25.58■■□□□ 1.69
COPE-209ENST00000599964 ERBB3P21860 1342 aa25.58■■□□□ 1.69
COPE-209ENST00000599964 LTV1Q96GA3 475 aaPredicted RBP25.57■■□□□ 1.68
COPE-209ENST00000599964 WDR17Q8IZU2 1322 aa25.57■■□□□ 1.68
COPE-209ENST00000599964 FAM208AQ9UK61 1670 aaKnown RBP25.56■■□□□ 1.68
COPE-209ENST00000599964 TRPC5Q9UL62 973 aaPredicted RBP25.55■■□□□ 1.68
COPE-209ENST00000599964 TOM1L2Q6ZVM7 507 aa25.54■■□□□ 1.68
COPE-209ENST00000599964 CCDC9Q9Y3X0 531 aaKnown RBP25.54■■□□□ 1.68
COPE-209ENST00000599964 DIAPH1O60610 1272 aaKnown RBP25.53■■□□□ 1.68
COPE-209ENST00000599964 VPS72Q15906 364 aa25.53■■□□□ 1.68
COPE-209ENST00000599964 CRB1P82279 1406 aa25.53■■□□□ 1.68
COPE-209ENST00000599964 LARP1Q6PKG0 1096 aaKnown RBP25.52■■□□□ 1.68
COPE-209ENST00000599964 EIF4A2Q14240 407 aaKnown RBP25.51■■□□□ 1.67
COPE-209ENST00000599964 NLRP2Q9NX02 1062 aa25.51■■□□□ 1.67
COPE-209ENST00000599964 QTRT2Q9H974 415 aaKnown RBP25.5■■□□□ 1.67
COPE-209ENST00000599964 NUDCQ9Y266 331 aa25.5■■□□□ 1.67
COPE-209ENST00000599964 ATRNO75882 1429 aa25.49■■□□□ 1.67
COPE-209ENST00000599964 CARD10Q9BWT7 1032 aa25.49■■□□□ 1.67
COPE-209ENST00000599964 COL3A1P02461 1466 aaPredicted RBP25.47■■□□□ 1.67
COPE-209ENST00000599964 SPATA31A5Q5VU36 1347 aa25.47■■□□□ 1.67
COPE-209ENST00000599964 SPATA31A7Q8IWB4 1347 aa25.47■■□□□ 1.67
COPE-209ENST00000599964 IL13P35225 146 aa25.47■■□□□ 1.67
COPE-209ENST00000599964 SPATA31A1Q5TZJ5 1347 aa25.46■■□□□ 1.67
COPE-209ENST00000599964 GJD4Q96KN9 370 aaPredicted RBP25.46■■□□□ 1.67
COPE-209ENST00000599964 THRAP3Q9Y2W1 955 aaKnown RBP25.46■■□□□ 1.67
COPE-209ENST00000599964 USP35Q9P2H5 1018 aa25.45■■□□□ 1.66
COPE-209ENST00000599964 NBPF6Q5VWK0 638 aa25.44■■□□□ 1.66
COPE-209ENST00000599964 TCP11L2Q8N4U5 519 aa25.44■■□□□ 1.66
COPE-209ENST00000599964 NBPF4Q96M43 638 aa25.44■■□□□ 1.66
COPE-209ENST00000599964 U2SURPO15042 1029 aaKnown RBP25.43■■□□□ 1.66
COPE-209ENST00000599964 EYA1Q99502 592 aa25.43■■□□□ 1.66
COPE-209ENST00000599964 RGS17Q9UGC6 210 aaPredicted RBP25.43■■□□□ 1.66
COPE-209ENST00000599964 IGSF1Q8N6C5 1336 aa25.42■■□□□ 1.66
COPE-209ENST00000599964 RBM6P78332 1123 aaKnown RBP25.42■■□□□ 1.66
COPE-209ENST00000599964 RGPD2P0DJD1 1756 aa25.41■■□□□ 1.66
COPE-209ENST00000599964 MRS2Q9HD23 443 aa25.41■■□□□ 1.66
COPE-209ENST00000599964 CDCA7Q9BWT1 371 aaPredicted RBP25.4■■□□□ 1.66
COPE-209ENST00000599964 RXRBP28702 533 aa25.39■■□□□ 1.66
COPE-209ENST00000599964 BARGINQ6ZT62 677 aa25.39■■□□□ 1.66
COPE-209ENST00000599964 RGPD1P0DJD0 1748 aa25.39■■□□□ 1.65
COPE-209ENST00000599964 CCER2I3L3R5 266 aa25.38■■□□□ 1.65
COPE-209ENST00000599964 U2AF1L5P0DN76 240 aaPredicted RBP25.38■■□□□ 1.65
COPE-209ENST00000599964 U2AF1Q01081 240 aaKnown RBP eCLIP25.38■■□□□ 1.65
COPE-209ENST00000599964 WDR43Q15061 677 aaKnown RBP eCLIP25.38■■□□□ 1.65
COPE-209ENST00000599964 USHBP1Q8N6Y0 703 aa25.38■■□□□ 1.65
COPE-209ENST00000599964 RAPGEF4Q8WZA2 1011 aa25.38■■□□□ 1.65
COPE-209ENST00000599964 GLI3P10071 1580 aa25.38■■□□□ 1.65
COPE-209ENST00000599964 NCAPD2Q15021 1401 aa25.37■■□□□ 1.65
COPE-209ENST00000599964 SULT6B1Q6IMI4 303 aa25.37■■□□□ 1.65
COPE-209ENST00000599964 MIER1Q8N108 512 aa25.37■■□□□ 1.65
COPE-209ENST00000599964 IL2RBP14784 551 aa25.36■■□□□ 1.65
COPE-209ENST00000599964 POTEAQ6S8J7 498 aa25.36■■□□□ 1.65
COPE-209ENST00000599964 FAM98CQ17RN3 349 aaKnown RBP25.35■■□□□ 1.65
COPE-209ENST00000599964 A0A0G2JS52 829 aa25.34■■□□□ 1.65
COPE-209ENST00000599964 TATP17735 454 aaPredicted RBP25.34■■□□□ 1.65
COPE-209ENST00000599964 MYT1Q01538 1121 aa25.34■■□□□ 1.65
COPE-209ENST00000599964 PNNQ9H307 717 aaKnown RBP25.34■■□□□ 1.65
COPE-209ENST00000599964 KDRP35968 1356 aa25.33■■□□□ 1.65
COPE-209ENST00000599964 WNK3Q9BYP7 1800 aa25.33■■□□□ 1.65
COPE-209ENST00000599964 HMOX1P09601 288 aa25.33■■□□□ 1.65
COPE-209ENST00000599964 CCDC184Q52MB2 194 aa25.32■■□□□ 1.64
COPE-209ENST00000599964 PARP4Q9UKK3 1724 aaKnown RBP25.32■■□□□ 1.64
COPE-209ENST00000599964 PLEKHG2Q9H7P9 1386 aa25.31■■□□□ 1.64
COPE-209ENST00000599964 ONECUT3O60422 494 aaPredicted RBP25.31■■□□□ 1.64
COPE-209ENST00000599964 FCHSD2O94868 740 aa25.31■■□□□ 1.64
COPE-209ENST00000599964 DISP2A7MBM2 1401 aa25.3■■□□□ 1.64
COPE-209ENST00000599964 NEFMP07197 916 aa25.3■■□□□ 1.64
COPE-209ENST00000599964 AEBP1Q8IUX7 1158 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms