RNA–Protein interactions for RNA: ENST00000594597.5

GRAMD1A-204, Transcript of GRAM domain containing 1A, humanhuman

TSL 4

Gene GRAMD1A, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-204ENST00000594597 CPSF1Q10570 1443 aaKnown RBP14.5□□□□□ -0.09
GRAMD1A-204ENST00000594597 TTC21BQ7Z4L5 1316 aa14.5□□□□□ -0.09
GRAMD1A-204ENST00000594597 GIGYF1O75420 1035 aaPredicted RBP14.5□□□□□ -0.09
GRAMD1A-204ENST00000594597 APBA3O96018 575 aa14.5□□□□□ -0.09
GRAMD1A-204ENST00000594597 FAM196AQ6ZSG2 479 aa14.5□□□□□ -0.09
GRAMD1A-204ENST00000594597 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
GRAMD1A-204ENST00000594597 TRIM37O94972 964 aa14.49□□□□□ -0.09
GRAMD1A-204ENST00000594597 PDE3BQ13370 1112 aa14.49□□□□□ -0.09
GRAMD1A-204ENST00000594597 CDCA7Q9BWT1 371 aaPredicted RBP14.49□□□□□ -0.09
GRAMD1A-204ENST00000594597 CRB1P82279 1406 aa14.49□□□□□ -0.09
GRAMD1A-204ENST00000594597 CDCA8Q53HL2 280 aa14.48□□□□□ -0.09
GRAMD1A-204ENST00000594597 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
GRAMD1A-204ENST00000594597 USP54Q70EL1 1684 aa14.48□□□□□ -0.09
GRAMD1A-204ENST00000594597 PARP4Q9UKK3 1724 aaKnown RBP14.47□□□□□ -0.09
GRAMD1A-204ENST00000594597 TMC1Q8TDI8 760 aa14.46□□□□□ -0.09
GRAMD1A-204ENST00000594597 EDC4Q6P2E9 1401 aaKnown RBP14.46□□□□□ -0.09
GRAMD1A-204ENST00000594597 PARD3Q8TEW0 1356 aa14.46□□□□□ -0.1
GRAMD1A-204ENST00000594597 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
GRAMD1A-204ENST00000594597 USP35Q9P2H5 1018 aa14.45□□□□□ -0.1
GRAMD1A-204ENST00000594597 USP31Q70CQ4 1352 aa14.45□□□□□ -0.1
GRAMD1A-204ENST00000594597 LARP1Q6PKG0 1096 aaKnown RBP14.44□□□□□ -0.1
GRAMD1A-204ENST00000594597 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
GRAMD1A-204ENST00000594597 WDR17Q8IZU2 1322 aa14.43□□□□□ -0.1
GRAMD1A-204ENST00000594597 COL18A1P39060 1754 aa14.43□□□□□ -0.1
GRAMD1A-204ENST00000594597 TMF1P82094 1093 aa14.43□□□□□ -0.1
GRAMD1A-204ENST00000594597 ARHGEF25Q86VW2 580 aa14.43□□□□□ -0.1
GRAMD1A-204ENST00000594597 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
GRAMD1A-204ENST00000594597 WNK3Q9BYP7 1800 aa14.42□□□□□ -0.1
GRAMD1A-204ENST00000594597 CCDC7Q96M83 1385 aa14.42□□□□□ -0.1
GRAMD1A-204ENST00000594597 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
GRAMD1A-204ENST00000594597 LTN1O94822 1766 aa14.41□□□□□ -0.1
GRAMD1A-204ENST00000594597 NFAT5O94916 1531 aa14.41□□□□□ -0.1
GRAMD1A-204ENST00000594597 OVOS2A0A0G2JMS6 1433 aa14.41□□□□□ -0.1
GRAMD1A-204ENST00000594597 OVOS2A0A0J9YW53 1432 aa14.41□□□□□ -0.1
GRAMD1A-204ENST00000594597 OVOS2Q6IE36 1432 aa14.41□□□□□ -0.1
GRAMD1A-204ENST00000594597 CEP350Q5VT06 3117 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 RGPD5Q99666 1765 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 USP47Q96K76 1375 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 ST20-MTHFSA0A0A6YYL1 179 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 DDB1Q16531 1140 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 SYT17Q9BSW7 474 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 CARD10Q9BWT7 1032 aa14.4□□□□□ -0.1
GRAMD1A-204ENST00000594597 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
GRAMD1A-204ENST00000594597 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
GRAMD1A-204ENST00000594597 A0A1W2PP64 1363 aa14.38□□□□□ -0.11
GRAMD1A-204ENST00000594597 TESK2Q96S53 571 aa14.38□□□□□ -0.11
GRAMD1A-204ENST00000594597 SLC12A5Q9H2X9 1139 aa14.38□□□□□ -0.11
GRAMD1A-204ENST00000594597 RGPD3A6NKT7 1758 aaPredicted RBP14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 RGPD4Q7Z3J3 1758 aa14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 ANKRD36BQ8N2N9 1353 aa14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 SOX12O15370 315 aa14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 COG3Q96JB2 828 aa14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 FHDC1Q9C0D6 1143 aaPredicted RBP14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
GRAMD1A-204ENST00000594597 PDGFDQ9GZP0 370 aaPredicted RBP14.36□□□□□ -0.11
GRAMD1A-204ENST00000594597 BCL9O00512 1426 aa14.35□□□□□ -0.11
GRAMD1A-204ENST00000594597 ZBTB7AO95365 584 aa14.35□□□□□ -0.11
GRAMD1A-204ENST00000594597 PTGER2P43116 358 aa14.35□□□□□ -0.11
GRAMD1A-204ENST00000594597 NME9Q86XW9 330 aa14.35□□□□□ -0.11
GRAMD1A-204ENST00000594597 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
GRAMD1A-204ENST00000594597 SBF2Q86WG5 1849 aa14.35□□□□□ -0.11
GRAMD1A-204ENST00000594597 EXOC5O00471 708 aa14.34□□□□□ -0.11
GRAMD1A-204ENST00000594597 CAPN15O75808 1086 aa14.34□□□□□ -0.11
GRAMD1A-204ENST00000594597 PCGF6Q9BYE7 350 aa14.34□□□□□ -0.11
GRAMD1A-204ENST00000594597 ERBB3P21860 1342 aa14.34□□□□□ -0.11
GRAMD1A-204ENST00000594597 AXIN2Q9Y2T1 843 aa14.33□□□□□ -0.12
GRAMD1A-204ENST00000594597 RREB1Q92766 1687 aa14.33□□□□□ -0.12
GRAMD1A-204ENST00000594597 PEAK1Q9H792 1746 aa14.32□□□□□ -0.12
GRAMD1A-204ENST00000594597 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
GRAMD1A-204ENST00000594597 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
GRAMD1A-204ENST00000594597 HSPA6P17066 643 aa14.31□□□□□ -0.12
GRAMD1A-204ENST00000594597 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
GRAMD1A-204ENST00000594597 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
GRAMD1A-204ENST00000594597 RTL1A6NKG5 1358 aa14.31□□□□□ -0.12
GRAMD1A-204ENST00000594597 SMG6Q86US8 1419 aaKnown RBP14.31□□□□□ -0.12
GRAMD1A-204ENST00000594597 KAT6BQ8WYB5 2073 aa14.3□□□□□ -0.12
GRAMD1A-204ENST00000594597 UTRNP46939 3433 aa14.3□□□□□ -0.12
GRAMD1A-204ENST00000594597 PLSCR1O15162 318 aa14.3□□□□□ -0.12
GRAMD1A-204ENST00000594597 IL2RBP14784 551 aa14.3□□□□□ -0.12
GRAMD1A-204ENST00000594597 IP6K1Q92551 441 aa14.3□□□□□ -0.12
GRAMD1A-204ENST00000594597 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
GRAMD1A-204ENST00000594597 SLC34A2O95436 690 aa14.29□□□□□ -0.12
GRAMD1A-204ENST00000594597 AMPHP49418 695 aa14.29□□□□□ -0.12
GRAMD1A-204ENST00000594597 GPR162Q16538 588 aa14.29□□□□□ -0.12
GRAMD1A-204ENST00000594597 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
GRAMD1A-204ENST00000594597 ANKRD24Q8TF21 1146 aa14.29□□□□□ -0.12
GRAMD1A-204ENST00000594597 KIF24Q5T7B8 1368 aa14.29□□□□□ -0.12
GRAMD1A-204ENST00000594597 CHD4Q14839 1912 aa14.28□□□□□ -0.12
GRAMD1A-204ENST00000594597 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
GRAMD1A-204ENST00000594597 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.13
GRAMD1A-204ENST00000594597 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■■■■ 33.8
GRAMD1A-204ENST00000594597 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
GRAMD1A-204ENST00000594597 NHSQ6T4R5 1651 aa14.25□□□□□ -0.13
GRAMD1A-204ENST00000594597 MYOM1P52179 1685 aa14.24□□□□□ -0.13
GRAMD1A-204ENST00000594597 MAP3K19Q56UN5 1328 aa14.24□□□□□ -0.13
GRAMD1A-204ENST00000594597 COL13A1Q5TAT6 717 aaPredicted RBP14.24□□□□□ -0.13
GRAMD1A-204ENST00000594597 MARCH10Q8NA82 808 aaPredicted RBP14.24□□□□□ -0.13
GRAMD1A-204ENST00000594597 FYB1O15117 783 aa14.23□□□□□ -0.13
GRAMD1A-204ENST00000594597 HOXC9P31274 260 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms