RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 NFAT5O94916 1531 aa23.75■■□□□ 1.39
LTBP4-209ENST00000594116 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
LTBP4-209ENST00000594116 TRIM37O94972 964 aa23.75■■□□□ 1.39
LTBP4-209ENST00000594116 TESK2Q96S53 571 aa23.75■■□□□ 1.39
LTBP4-209ENST00000594116 LRRC37A3O60309 1634 aa23.74■■□□□ 1.39
LTBP4-209ENST00000594116 RGPD5Q99666 1765 aa23.74■■□□□ 1.39
LTBP4-209ENST00000594116 PARD3Q8TEW0 1356 aa23.74■■□□□ 1.39
LTBP4-209ENST00000594116 ABCC6O95255 1503 aa23.74■■□□□ 1.39
LTBP4-209ENST00000594116 ARHGEF25Q86VW2 580 aa23.73■■□□□ 1.39
LTBP4-209ENST00000594116 CD163L1Q9NR16 1453 aa23.73■■□□□ 1.39
LTBP4-209ENST00000594116 RREB1Q92766 1687 aa23.73■■□□□ 1.39
LTBP4-209ENST00000594116 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
LTBP4-209ENST00000594116 WDR17Q8IZU2 1322 aa23.72■■□□□ 1.39
LTBP4-209ENST00000594116 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
LTBP4-209ENST00000594116 PSDA5PKW4 1024 aaPredicted RBP23.71■■□□□ 1.39
LTBP4-209ENST00000594116 EZH2Q15910 746 aaKnown RBP23.71■■□□□ 1.39
LTBP4-209ENST00000594116 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
LTBP4-209ENST00000594116 C11orf95C9JLR9 678 aaPredicted RBP23.7■■□□□ 1.38
LTBP4-209ENST00000594116 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
LTBP4-209ENST00000594116 APBA3O96018 575 aa23.69■■□□□ 1.38
LTBP4-209ENST00000594116 TOM1L2Q6ZVM7 507 aa23.69■■□□□ 1.38
LTBP4-209ENST00000594116 OVOS2A0A0G2JMS6 1433 aa23.68■■□□□ 1.38
LTBP4-209ENST00000594116 OVOS2A0A0J9YW53 1432 aa23.68■■□□□ 1.38
LTBP4-209ENST00000594116 OVOS2Q6IE36 1432 aa23.68■■□□□ 1.38
LTBP4-209ENST00000594116 SLC24A1O60721 1099 aa23.68■■□□□ 1.38
LTBP4-209ENST00000594116 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
LTBP4-209ENST00000594116 PUS7Q96PZ0 661 aaKnown RBP23.67■■□□□ 1.38
LTBP4-209ENST00000594116 SBF2Q86WG5 1849 aa23.67■■□□□ 1.38
LTBP4-209ENST00000594116 SOX12O15370 315 aa23.66■■□□□ 1.38
LTBP4-209ENST00000594116 EDC4Q6P2E9 1401 aaKnown RBP23.65■■□□□ 1.38
LTBP4-209ENST00000594116 RGPD3A6NKT7 1758 aaPredicted RBP23.65■■□□□ 1.38
LTBP4-209ENST00000594116 RGPD4Q7Z3J3 1758 aa23.65■■□□□ 1.38
LTBP4-209ENST00000594116 R3HDM1Q15032 1099 aaKnown RBP23.64■■□□□ 1.37
LTBP4-209ENST00000594116 DDB1Q16531 1140 aa23.64■■□□□ 1.37
LTBP4-209ENST00000594116 HDGFL2Q7Z4V5 671 aaPredicted RBP23.64■■□□□ 1.37
LTBP4-209ENST00000594116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.64■■□□□ 1.37
LTBP4-209ENST00000594116 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
LTBP4-209ENST00000594116 LTN1O94822 1766 aa23.64■■□□□ 1.37
LTBP4-209ENST00000594116 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
LTBP4-209ENST00000594116 CARD10Q9BWT7 1032 aa23.63■■□□□ 1.37
LTBP4-209ENST00000594116 TMF1P82094 1093 aa23.62■■□□□ 1.37
LTBP4-209ENST00000594116 SLC12A5Q9H2X9 1139 aa23.62■■□□□ 1.37
LTBP4-209ENST00000594116 A0A1W2PP64 1363 aa23.62■■□□□ 1.37
LTBP4-209ENST00000594116 CSB-PGBD3P0DP91 1061 aa23.61■■□□□ 1.37
LTBP4-209ENST00000594116 NME9Q86XW9 330 aa23.61■■□□□ 1.37
LTBP4-209ENST00000594116 TERF2IPQ9NYB0 399 aa23.61■■□□□ 1.37
LTBP4-209ENST00000594116 NINLQ9Y2I6 1382 aa23.61■■□□□ 1.37
LTBP4-209ENST00000594116 BCL9O00512 1426 aa23.6■■□□□ 1.37
LTBP4-209ENST00000594116 CCDC7Q96M83 1385 aa23.6■■□□□ 1.37
LTBP4-209ENST00000594116 MYOM1P52179 1685 aa23.57■■□□□ 1.36
LTBP4-209ENST00000594116 ERBB3P21860 1342 aa23.57■■□□□ 1.36
LTBP4-209ENST00000594116 MARCH10Q8NA82 808 aaPredicted RBP23.56■■□□□ 1.36
LTBP4-209ENST00000594116 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
LTBP4-209ENST00000594116 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
LTBP4-209ENST00000594116 NBPF14Q5TI25 921 aa23.54■■□□□ 1.36
LTBP4-209ENST00000594116 BCL11BQ9C0K0 894 aaPredicted RBP23.54■■□□□ 1.36
LTBP4-209ENST00000594116 KIF7Q2M1P5 1343 aa23.54■■□□□ 1.36
LTBP4-209ENST00000594116 PLSCR1O15162 318 aa23.53■■□□□ 1.36
LTBP4-209ENST00000594116 ZNF316A6NFI3 1004 aaPredicted RBP23.51■■□□□ 1.35
LTBP4-209ENST00000594116 EXOC5O00471 708 aa23.51■■□□□ 1.35
LTBP4-209ENST00000594116 WASHC2AQ641Q2 1341 aa23.51■■□□□ 1.35
LTBP4-209ENST00000594116 FAM208AQ9UK61 1670 aaKnown RBP23.51■■□□□ 1.35
LTBP4-209ENST00000594116 PTF1AQ7RTS3 328 aa23.48■■□□□ 1.35
LTBP4-209ENST00000594116 ANKRD24Q8TF21 1146 aa23.48■■□□□ 1.35
LTBP4-209ENST00000594116 NLRP2Q9NX02 1062 aa23.48■■□□□ 1.35
LTBP4-209ENST00000594116 ANKRD36BQ8N2N9 1353 aa23.48■■□□□ 1.35
LTBP4-209ENST00000594116 NHSQ6T4R5 1651 aa23.48■■□□□ 1.35
LTBP4-209ENST00000594116 IL2RBP14784 551 aa23.45■■□□□ 1.34
LTBP4-209ENST00000594116 IP6K1Q92551 441 aa23.44■■□□□ 1.34
LTBP4-209ENST00000594116 COG3Q96JB2 828 aa23.44■■□□□ 1.34
LTBP4-209ENST00000594116 CASZ1Q86V15 1759 aa23.42■■□□□ 1.34
LTBP4-209ENST00000594116 PROM2Q8N271 834 aa23.41■■□□□ 1.34
LTBP4-209ENST00000594116 ANO8Q9HCE9 1232 aaPredicted RBP23.41■■□□□ 1.34
LTBP4-209ENST00000594116 MAP3K19Q56UN5 1328 aa23.4■■□□□ 1.34
LTBP4-209ENST00000594116 POLR3GLQ9BT43 218 aa23.4■■□□□ 1.34
LTBP4-209ENST00000594116 KIF20BQ96Q89 1820 aa23.38■■□□□ 1.33
LTBP4-209ENST00000594116 KCNQ2O43526 872 aa23.38■■□□□ 1.33
LTBP4-209ENST00000594116 SPON1Q9HCB6 807 aa23.38■■□□□ 1.33
LTBP4-209ENST00000594116 RTL1A6NKG5 1358 aa23.38■■□□□ 1.33
LTBP4-209ENST00000594116 BTAF1O14981 1849 aa23.38■■□□□ 1.33
LTBP4-209ENST00000594116 HOXC9P31274 260 aa23.37■■□□□ 1.33
LTBP4-209ENST00000594116 TXNRD1Q16881 649 aa23.37■■□□□ 1.33
LTBP4-209ENST00000594116 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
LTBP4-209ENST00000594116 FYB1O15117 783 aa23.35■■□□□ 1.33
LTBP4-209ENST00000594116 AMPHP49418 695 aa23.34■■□□□ 1.33
LTBP4-209ENST00000594116 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-209ENST00000594116 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
LTBP4-209ENST00000594116 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
LTBP4-209ENST00000594116 FBLN1P23142 703 aa23.33■■□□□ 1.33
LTBP4-209ENST00000594116 PAPPAQ13219 1627 aa23.33■■□□□ 1.32
LTBP4-209ENST00000594116 SHANK3Q9BYB0 1731 aa23.32■■□□□ 1.32
LTBP4-209ENST00000594116 GGNBP2Q9H3C7 697 aa23.31■■□□□ 1.32
LTBP4-209ENST00000594116 STK32BQ9NY57 414 aa23.3■■□□□ 1.32
LTBP4-209ENST00000594116 SLC15A2Q16348 729 aa23.29■■□□□ 1.32
LTBP4-209ENST00000594116 PPP1R1BQ9UD71 204 aaPredicted RBP23.29■■□□□ 1.32
LTBP4-209ENST00000594116 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
LTBP4-209ENST00000594116 PDGFDQ9GZP0 370 aaPredicted RBP23.28■■□□□ 1.32
LTBP4-209ENST00000594116 PANK3Q9H999 370 aa23.28■■□□□ 1.32
LTBP4-209ENST00000594116 MEGF6O75095 1541 aa23.28■■□□□ 1.32
LTBP4-209ENST00000594116 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms