RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 TRIM27P14373 513 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 RNF20Q5VTR2 975 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 ATP6V1DQ9Y5K8 247 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 NEUROD6Q96NK8 337 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
SYMPK-202ENST00000593504 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
SYMPK-202ENST00000593504 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 CHD1O14646 1710 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 H3BQV1 296 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 IFFO2Q5TF58 517 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 TTC21BQ7Z4L5 1316 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 PHF14O94880 888 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 CABP4P57796 275 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 IL16Q14005 1332 aa18.49■□□□□ 0.55
SYMPK-202ENST00000593504 FOXO3O43524 673 aa18.48■□□□□ 0.55
SYMPK-202ENST00000593504 NUCB2P80303 420 aa18.48■□□□□ 0.55
SYMPK-202ENST00000593504 PRDM11Q9NQV5 511 aa18.47■□□□□ 0.55
SYMPK-202ENST00000593504 PLEKHH1Q9ULM0 1364 aa18.47■□□□□ 0.55
SYMPK-202ENST00000593504 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
SYMPK-202ENST00000593504 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
SYMPK-202ENST00000593504 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
SYMPK-202ENST00000593504 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
SYMPK-202ENST00000593504 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
SYMPK-202ENST00000593504 TAF7Q15545 349 aaPredicted RBP18.46■□□□□ 0.55
SYMPK-202ENST00000593504 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
SYMPK-202ENST00000593504 MBIPQ9NS73 344 aa18.46■□□□□ 0.55
SYMPK-202ENST00000593504 MYL6BP14649 208 aa18.45■□□□□ 0.54
SYMPK-202ENST00000593504 ZMYM3Q14202 1370 aa18.45■□□□□ 0.54
SYMPK-202ENST00000593504 DDX54Q8TDD1 881 aaKnown RBP18.45■□□□□ 0.54
SYMPK-202ENST00000593504 FSD1Q9BTV5 496 aa18.45■□□□□ 0.54
SYMPK-202ENST00000593504 ABCC1P33527 1531 aa18.45■□□□□ 0.54
SYMPK-202ENST00000593504 CCDC27Q2M243 656 aa18.45■□□□□ 0.54
SYMPK-202ENST00000593504 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
SYMPK-202ENST00000593504 RABEP1Q15276 862 aa18.44■□□□□ 0.54
SYMPK-202ENST00000593504 CHMP4CQ96CF2 233 aa18.44■□□□□ 0.54
SYMPK-202ENST00000593504 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
SYMPK-202ENST00000593504 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
SYMPK-202ENST00000593504 ATP10AO60312 1499 aa18.44■□□□□ 0.54
SYMPK-202ENST00000593504 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
SYMPK-202ENST00000593504 POLKQ9UBT6 870 aa18.44■□□□□ 0.54
SYMPK-202ENST00000593504 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
SYMPK-202ENST00000593504 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
SYMPK-202ENST00000593504 SMC3Q9UQE7 1217 aa18.43■□□□□ 0.54
SYMPK-202ENST00000593504 NEO1Q92859 1461 aa18.43■□□□□ 0.54
SYMPK-202ENST00000593504 NPC1L1Q9UHC9 1359 aa18.43■□□□□ 0.54
SYMPK-202ENST00000593504 IGHDP01880 384 aa18.42■□□□□ 0.54
SYMPK-202ENST00000593504 NEK4P51957 841 aa18.42■□□□□ 0.54
SYMPK-202ENST00000593504 SF3A1Q15459 793 aaKnown RBP18.42■□□□□ 0.54
SYMPK-202ENST00000593504 HSP90AB2PQ58FF8 381 aa18.42■□□□□ 0.54
SYMPK-202ENST00000593504 APPP05067 770 aa18.42■□□□□ 0.54
SYMPK-202ENST00000593504 MCTP1Q6DN14 999 aa18.41■□□□□ 0.54
SYMPK-202ENST00000593504 TULP1O00294 542 aaPredicted RBP18.41■□□□□ 0.54
SYMPK-202ENST00000593504 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
SYMPK-202ENST00000593504 ZCCHC11Q5TAX3 1644 aaKnown RBP18.41■□□□□ 0.54
SYMPK-202ENST00000593504 F6X3S4 739 aa18.4■□□□□ 0.54
SYMPK-202ENST00000593504 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
SYMPK-202ENST00000593504 EXOC6BQ9Y2D4 811 aa18.4■□□□□ 0.54
SYMPK-202ENST00000593504 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
SYMPK-202ENST00000593504 SIL1Q9H173 461 aa18.4■□□□□ 0.54
SYMPK-202ENST00000593504 NPATQ14207 1427 aa18.4■□□□□ 0.54
SYMPK-202ENST00000593504 IL1RAPL2Q9NP60 686 aa18.39■□□□□ 0.54
SYMPK-202ENST00000593504 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.53
SYMPK-202ENST00000593504 G3V3G9 751 aa18.39■□□□□ 0.53
SYMPK-202ENST00000593504 DCAF8Q5TAQ9 597 aa18.39■□□□□ 0.53
SYMPK-202ENST00000593504 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
SYMPK-202ENST00000593504 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
SYMPK-202ENST00000593504 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
SYMPK-202ENST00000593504 MAP4K4O95819 1239 aaPredicted RBP18.38■□□□□ 0.53
SYMPK-202ENST00000593504 WASHC4Q2M389 1173 aa18.38■□□□□ 0.53
SYMPK-202ENST00000593504 CFAP65Q6ZU64 1925 aaKnown RBP18.38■□□□□ 0.53
SYMPK-202ENST00000593504 MSH5O43196 834 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 HIP1O00291 1037 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 ERCC6L2Q5T890 1561 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 PTPRCP08575 1304 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-202ENST00000593504 TRDNQ13061 729 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 KDM5CP41229 1560 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 EIF4A2Q14240 407 aaKnown RBP18.37■□□□□ 0.53
SYMPK-202ENST00000593504 SYNE3Q6ZMZ3 975 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
SYMPK-202ENST00000593504 CPLX2Q6PUV4 134 aaKnown RBP18.36■□□□□ 0.53
SYMPK-202ENST00000593504 VPS37DQ86XT2 251 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 TPM4P67936 248 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 CFAP74Q9C0B2 1584 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 PSMA5P28066 241 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 MCM2P49736 904 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 MEX3CQ5U5Q3 659 aaKnown RBP18.36■□□□□ 0.53
SYMPK-202ENST00000593504 ZFYVE9O95405 1425 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 CDC42BPAQ5VT25 1732 aa18.36■□□□□ 0.53
SYMPK-202ENST00000593504 CPLX1O14810 134 aa18.35■□□□□ 0.53
SYMPK-202ENST00000593504 CCDC34Q96HJ3 373 aa18.35■□□□□ 0.53
SYMPK-202ENST00000593504 ADCY10Q96PN6 1610 aa18.35■□□□□ 0.53
SYMPK-202ENST00000593504 K7ELQ4 463 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms