RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
CIRBP-241ENST00000593048 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
CIRBP-241ENST00000593048 ST20-MTHFSA0A0A6YYL1 179 aa22.74■■□□□ 1.23
CIRBP-241ENST00000593048 DDB1Q16531 1140 aa22.74■■□□□ 1.23
CIRBP-241ENST00000593048 NME9Q86XW9 330 aa22.74■■□□□ 1.23
CIRBP-241ENST00000593048 PUS7Q96PZ0 661 aaKnown RBP22.74■■□□□ 1.23
CIRBP-241ENST00000593048 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-241ENST00000593048 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
CIRBP-241ENST00000593048 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
CIRBP-241ENST00000593048 CAMKK2Q96RR4 588 aa22.72■■□□□ 1.23
CIRBP-241ENST00000593048 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-241ENST00000593048 USP31Q70CQ4 1352 aa22.71■■□□□ 1.23
CIRBP-241ENST00000593048 CARD10Q9BWT7 1032 aa22.7■■□□□ 1.22
CIRBP-241ENST00000593048 CD163L1Q9NR16 1453 aa22.7■■□□□ 1.22
CIRBP-241ENST00000593048 COL18A1P39060 1754 aa22.69■■□□□ 1.22
CIRBP-241ENST00000593048 EDC4Q6P2E9 1401 aaKnown RBP22.69■■□□□ 1.22
CIRBP-241ENST00000593048 R3HDM1Q15032 1099 aaKnown RBP22.69■■□□□ 1.22
CIRBP-241ENST00000593048 TESK2Q96S53 571 aa22.69■■□□□ 1.22
CIRBP-241ENST00000593048 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
CIRBP-241ENST00000593048 PARD3Q8TEW0 1356 aa22.68■■□□□ 1.22
CIRBP-241ENST00000593048 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
CIRBP-241ENST00000593048 RREB1Q92766 1687 aa22.68■■□□□ 1.22
CIRBP-241ENST00000593048 NFAT5O94916 1531 aa22.67■■□□□ 1.22
CIRBP-241ENST00000593048 OVOS2A0A0G2JMS6 1433 aa22.67■■□□□ 1.22
CIRBP-241ENST00000593048 OVOS2A0A0J9YW53 1432 aa22.67■■□□□ 1.22
CIRBP-241ENST00000593048 OVOS2Q6IE36 1432 aa22.67■■□□□ 1.22
CIRBP-241ENST00000593048 A0A1W2PP64 1363 aa22.67■■□□□ 1.22
CIRBP-241ENST00000593048 NINLQ9Y2I6 1382 aa22.65■■□□□ 1.22
CIRBP-241ENST00000593048 EXOC5O00471 708 aa22.64■■□□□ 1.21
CIRBP-241ENST00000593048 NBPF14Q5TI25 921 aa22.64■■□□□ 1.21
CIRBP-241ENST00000593048 NUP188Q5SRE5 1749 aa22.64■■□□□ 1.21
CIRBP-241ENST00000593048 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
CIRBP-241ENST00000593048 TMF1P82094 1093 aa22.63■■□□□ 1.21
CIRBP-241ENST00000593048 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
CIRBP-241ENST00000593048 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
CIRBP-241ENST00000593048 ABCC6O95255 1503 aa22.62■■□□□ 1.21
CIRBP-241ENST00000593048 RGPD5Q99666 1765 aa22.61■■□□□ 1.21
CIRBP-241ENST00000593048 COG3Q96JB2 828 aa22.61■■□□□ 1.21
CIRBP-241ENST00000593048 USP47Q96K76 1375 aa22.61■■□□□ 1.21
CIRBP-241ENST00000593048 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
CIRBP-241ENST00000593048 ANKRD24Q8TF21 1146 aa22.6■■□□□ 1.21
CIRBP-241ENST00000593048 ERBB3P21860 1342 aa22.59■■□□□ 1.21
CIRBP-241ENST00000593048 BCL11BQ9C0K0 894 aaPredicted RBP22.59■■□□□ 1.21
CIRBP-241ENST00000593048 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
CIRBP-241ENST00000593048 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
CIRBP-241ENST00000593048 USP54Q70EL1 1684 aa22.57■■□□□ 1.2
CIRBP-241ENST00000593048 PLSCR1O15162 318 aa22.56■■□□□ 1.2
CIRBP-241ENST00000593048 ANKRD36BQ8N2N9 1353 aa22.55■■□□□ 1.2
CIRBP-241ENST00000593048 PEAK1Q9H792 1746 aa22.55■■□□□ 1.2
CIRBP-241ENST00000593048 IL2RBP14784 551 aa22.55■■□□□ 1.2
CIRBP-241ENST00000593048 IP6K1Q92551 441 aa22.55■■□□□ 1.2
CIRBP-241ENST00000593048 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-241ENST00000593048 PTF1AQ7RTS3 328 aa22.54■■□□□ 1.2
CIRBP-241ENST00000593048 WNK3Q9BYP7 1800 aa22.53■■□□□ 1.2
CIRBP-241ENST00000593048 AMPHP49418 695 aa22.53■■□□□ 1.2
CIRBP-241ENST00000593048 BCL9O00512 1426 aa22.53■■□□□ 1.2
CIRBP-241ENST00000593048 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
CIRBP-241ENST00000593048 LTN1O94822 1766 aa22.53■■□□□ 1.2
CIRBP-241ENST00000593048 SBF2Q86WG5 1849 aa22.52■■□□□ 1.2
CIRBP-241ENST00000593048 RGPD3A6NKT7 1758 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-241ENST00000593048 RGPD4Q7Z3J3 1758 aa22.51■■□□□ 1.19
CIRBP-241ENST00000593048 TNS2Q63HR2 1409 aa22.51■■□□□ 1.19
CIRBP-241ENST00000593048 FBLN1P23142 703 aa22.5■■□□□ 1.19
CIRBP-241ENST00000593048 GGNBP2Q9H3C7 697 aa22.49■■□□□ 1.19
CIRBP-241ENST00000593048 MAP3K19Q56UN5 1328 aa22.49■■□□□ 1.19
CIRBP-241ENST00000593048 FYB1O15117 783 aa22.48■■□□□ 1.19
CIRBP-241ENST00000593048 HOXC9P31274 260 aa22.48■■□□□ 1.19
CIRBP-241ENST00000593048 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
CIRBP-241ENST00000593048 KCNQ2O43526 872 aa22.47■■□□□ 1.19
CIRBP-241ENST00000593048 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
CIRBP-241ENST00000593048 TXNRD1Q16881 649 aa22.44■■□□□ 1.18
CIRBP-241ENST00000593048 PROM2Q8N271 834 aa22.44■■□□□ 1.18
CIRBP-241ENST00000593048 DDX54Q8TDD1 881 aaKnown RBP22.44■■□□□ 1.18
CIRBP-241ENST00000593048 SPON1Q9HCB6 807 aa22.43■■□□□ 1.18
CIRBP-241ENST00000593048 ANO8Q9HCE9 1232 aaPredicted RBP22.42■■□□□ 1.18
CIRBP-241ENST00000593048 PPP1R1BQ9UD71 204 aaPredicted RBP22.42■■□□□ 1.18
CIRBP-241ENST00000593048 CASZ1Q86V15 1759 aa22.41■■□□□ 1.18
CIRBP-241ENST00000593048 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
CIRBP-241ENST00000593048 POLR3GLQ9BT43 218 aa22.41■■□□□ 1.18
CIRBP-241ENST00000593048 STK32BQ9NY57 414 aa22.41■■□□□ 1.18
CIRBP-241ENST00000593048 RTL1A6NKG5 1358 aa22.39■■□□□ 1.18
CIRBP-241ENST00000593048 CARD14Q9BXL6 1004 aa22.38■■□□□ 1.17
CIRBP-241ENST00000593048 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
CIRBP-241ENST00000593048 FAM208AQ9UK61 1670 aaKnown RBP22.37■■□□□ 1.17
CIRBP-241ENST00000593048 NSD3Q9BZ95 1437 aa22.37■■□□□ 1.17
CIRBP-241ENST00000593048 SLC15A2Q16348 729 aa22.36■■□□□ 1.17
CIRBP-241ENST00000593048 NBPF6Q5VWK0 638 aa22.36■■□□□ 1.17
CIRBP-241ENST00000593048 ZCRB1Q8TBF4 217 aaKnown RBP22.36■■□□□ 1.17
CIRBP-241ENST00000593048 NBPF4Q96M43 638 aa22.36■■□□□ 1.17
CIRBP-241ENST00000593048 SYTL4Q96C24 671 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-241ENST00000593048 NHSQ6T4R5 1651 aa22.35■■□□□ 1.17
CIRBP-241ENST00000593048 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
CIRBP-241ENST00000593048 HSP90AB2PQ58FF8 381 aa22.34■■□□□ 1.17
CIRBP-241ENST00000593048 USHBP1Q8N6Y0 703 aa22.34■■□□□ 1.17
CIRBP-241ENST00000593048 RAPGEF4Q8WZA2 1011 aa22.34■■□□□ 1.17
CIRBP-241ENST00000593048 PPM1GO15355 546 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-241ENST00000593048 ZBTB7AO95365 584 aa22.32■■□□□ 1.16
CIRBP-241ENST00000593048 YY1P25490 414 aa22.32■■□□□ 1.16
CIRBP-241ENST00000593048 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-241ENST00000593048 INSRP06213 1382 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms