RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 COL18A1P39060 1754 aa24.34■■□□□ 1.49
RANBP3-227ENST00000592266 USP31Q70CQ4 1352 aa24.34■■□□□ 1.49
RANBP3-227ENST00000592266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.34■■□□□ 1.49
RANBP3-227ENST00000592266 CDCA7Q9BWT1 371 aaPredicted RBP24.34■■□□□ 1.49
RANBP3-227ENST00000592266 TERF2IPQ9NYB0 399 aa24.34■■□□□ 1.49
RANBP3-227ENST00000592266 AXIN2Q9Y2T1 843 aa24.34■■□□□ 1.49
RANBP3-227ENST00000592266 CSB-PGBD3P0DP91 1061 aa24.33■■□□□ 1.49
RANBP3-227ENST00000592266 EZH2Q15910 746 aaKnown RBP24.33■■□□□ 1.49
RANBP3-227ENST00000592266 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
RANBP3-227ENST00000592266 ABCC6O95255 1503 aa24.33■■□□□ 1.49
RANBP3-227ENST00000592266 NFAT5O94916 1531 aa24.32■■□□□ 1.48
RANBP3-227ENST00000592266 PSDA5PKW4 1024 aaPredicted RBP24.32■■□□□ 1.48
RANBP3-227ENST00000592266 DDB1Q16531 1140 aa24.32■■□□□ 1.48
RANBP3-227ENST00000592266 OVOS2A0A0G2JMS6 1433 aa24.32■■□□□ 1.48
RANBP3-227ENST00000592266 OVOS2A0A0J9YW53 1432 aa24.32■■□□□ 1.48
RANBP3-227ENST00000592266 OVOS2Q6IE36 1432 aa24.32■■□□□ 1.48
RANBP3-227ENST00000592266 CD163L1Q9NR16 1453 aa24.32■■□□□ 1.48
RANBP3-227ENST00000592266 EDC4Q6P2E9 1401 aaKnown RBP24.31■■□□□ 1.48
RANBP3-227ENST00000592266 NINLQ9Y2I6 1382 aa24.3■■□□□ 1.48
RANBP3-227ENST00000592266 CARD10Q9BWT7 1032 aa24.3■■□□□ 1.48
RANBP3-227ENST00000592266 SLC12A5Q9H2X9 1139 aa24.3■■□□□ 1.48
RANBP3-227ENST00000592266 LRP5O75197 1615 aa24.28■■□□□ 1.48
RANBP3-227ENST00000592266 NME9Q86XW9 330 aa24.28■■□□□ 1.48
RANBP3-227ENST00000592266 LRRC37A3O60309 1634 aa24.28■■□□□ 1.48
RANBP3-227ENST00000592266 USP54Q70EL1 1684 aa24.27■■□□□ 1.48
RANBP3-227ENST00000592266 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
RANBP3-227ENST00000592266 R3HDM1Q15032 1099 aaKnown RBP24.27■■□□□ 1.48
RANBP3-227ENST00000592266 A0A1W2PP64 1363 aa24.27■■□□□ 1.48
RANBP3-227ENST00000592266 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
RANBP3-227ENST00000592266 TESK2Q96S53 571 aa24.26■■□□□ 1.47
RANBP3-227ENST00000592266 NBPF14Q5TI25 921 aa24.23■■□□□ 1.47
RANBP3-227ENST00000592266 WNK3Q9BYP7 1800 aa24.23■■□□□ 1.47
RANBP3-227ENST00000592266 PEAK1Q9H792 1746 aa24.22■■□□□ 1.47
RANBP3-227ENST00000592266 RGPD5Q99666 1765 aa24.21■■□□□ 1.47
RANBP3-227ENST00000592266 ERBB3P21860 1342 aa24.21■■□□□ 1.47
RANBP3-227ENST00000592266 BCL9O00512 1426 aa24.2■■□□□ 1.46
RANBP3-227ENST00000592266 EXOC5O00471 708 aa24.2■■□□□ 1.46
RANBP3-227ENST00000592266 RREB1Q92766 1687 aa24.2■■□□□ 1.46
RANBP3-227ENST00000592266 BCL11BQ9C0K0 894 aaPredicted RBP24.19■■□□□ 1.46
RANBP3-227ENST00000592266 USP47Q96K76 1375 aa24.18■■□□□ 1.46
RANBP3-227ENST00000592266 TMF1P82094 1093 aa24.18■■□□□ 1.46
RANBP3-227ENST00000592266 MARCH10Q8NA82 808 aaPredicted RBP24.18■■□□□ 1.46
RANBP3-227ENST00000592266 PLSCR1O15162 318 aa24.17■■□□□ 1.46
RANBP3-227ENST00000592266 NLRP2Q9NX02 1062 aa24.17■■□□□ 1.46
RANBP3-227ENST00000592266 COG3Q96JB2 828 aa24.16■■□□□ 1.46
RANBP3-227ENST00000592266 TIMELESSQ9UNS1 1208 aa24.16■■□□□ 1.46
RANBP3-227ENST00000592266 TNS2Q63HR2 1409 aa24.16■■□□□ 1.46
RANBP3-227ENST00000592266 LTN1O94822 1766 aa24.16■■□□□ 1.46
RANBP3-227ENST00000592266 ANKRD36BQ8N2N9 1353 aa24.16■■□□□ 1.46
RANBP3-227ENST00000592266 NUP188Q5SRE5 1749 aa24.15■■□□□ 1.46
RANBP3-227ENST00000592266 ANKRD24Q8TF21 1146 aa24.15■■□□□ 1.46
RANBP3-227ENST00000592266 RGPD3A6NKT7 1758 aaPredicted RBP24.14■■□□□ 1.46
RANBP3-227ENST00000592266 RGPD4Q7Z3J3 1758 aa24.14■■□□□ 1.46
RANBP3-227ENST00000592266 CDCA8Q53HL2 280 aa24.14■■□□□ 1.45
RANBP3-227ENST00000592266 SBF2Q86WG5 1849 aa24.13■■□□□ 1.45
RANBP3-227ENST00000592266 CLSPNQ9HAW4 1339 aa24.12■■□□□ 1.45
RANBP3-227ENST00000592266 IL2RBP14784 551 aa24.12■■□□□ 1.45
RANBP3-227ENST00000592266 IP6K1Q92551 441 aa24.11■■□□□ 1.45
RANBP3-227ENST00000592266 AMPHP49418 695 aa24.06■■□□□ 1.44
RANBP3-227ENST00000592266 PTF1AQ7RTS3 328 aa24.06■■□□□ 1.44
RANBP3-227ENST00000592266 MAP3K19Q56UN5 1328 aa24.06■■□□□ 1.44
RANBP3-227ENST00000592266 FAM208AQ9UK61 1670 aaKnown RBP24.05■■□□□ 1.44
RANBP3-227ENST00000592266 LTV1Q96GA3 475 aaPredicted RBP24.04■■□□□ 1.44
RANBP3-227ENST00000592266 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
RANBP3-227ENST00000592266 RTL1A6NKG5 1358 aa24.03■■□□□ 1.44
RANBP3-227ENST00000592266 HOXC9P31274 260 aa24.03■■□□□ 1.44
RANBP3-227ENST00000592266 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
RANBP3-227ENST00000592266 FYB1O15117 783 aa24.01■■□□□ 1.43
RANBP3-227ENST00000592266 TXNRD1Q16881 649 aa24.01■■□□□ 1.43
RANBP3-227ENST00000592266 NHSQ6T4R5 1651 aa24■■□□□ 1.43
RANBP3-227ENST00000592266 KCNQ2O43526 872 aa24■■□□□ 1.43
RANBP3-227ENST00000592266 PROM2Q8N271 834 aa24■■□□□ 1.43
RANBP3-227ENST00000592266 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
RANBP3-227ENST00000592266 ACSBG1Q96GR2 724 aa23.99■■□□□ 1.43
RANBP3-227ENST00000592266 ANO8Q9HCE9 1232 aaPredicted RBP23.99■■□□□ 1.43
RANBP3-227ENST00000592266 STK32BQ9NY57 414 aa23.98■■□□□ 1.43
RANBP3-227ENST00000592266 SMG6Q86US8 1419 aaKnown RBP23.97■■□□□ 1.43
RANBP3-227ENST00000592266 PPP1R1BQ9UD71 204 aaPredicted RBP23.97■■□□□ 1.43
RANBP3-227ENST00000592266 FBLN1P23142 703 aa23.96■■□□□ 1.43
RANBP3-227ENST00000592266 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
RANBP3-227ENST00000592266 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
RANBP3-227ENST00000592266 KIF24Q5T7B8 1368 aa23.93■■□□□ 1.42
RANBP3-227ENST00000592266 SLC15A2Q16348 729 aa23.93■■□□□ 1.42
RANBP3-227ENST00000592266 KIF20BQ96Q89 1820 aa23.92■■□□□ 1.42
RANBP3-227ENST00000592266 NSD3Q9BZ95 1437 aa23.92■■□□□ 1.42
RANBP3-227ENST00000592266 CGNL1Q0VF96 1302 aa23.91■■□□□ 1.42
RANBP3-227ENST00000592266 FLT4P35916 1363 aa23.91■■□□□ 1.42
RANBP3-227ENST00000592266 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
RANBP3-227ENST00000592266 INSRP06213 1382 aa23.9■■□□□ 1.42
RANBP3-227ENST00000592266 MYOM1P52179 1685 aa23.89■■□□□ 1.42
RANBP3-227ENST00000592266 CASZ1Q86V15 1759 aa23.89■■□□□ 1.42
RANBP3-227ENST00000592266 RAPGEF4Q8WZA2 1011 aa23.89■■□□□ 1.41
RANBP3-227ENST00000592266 BTAF1O14981 1849 aa23.89■■□□□ 1.41
RANBP3-227ENST00000592266 NBPF6Q5VWK0 638 aa23.88■■□□□ 1.41
RANBP3-227ENST00000592266 NBPF4Q96M43 638 aa23.88■■□□□ 1.41
RANBP3-227ENST00000592266 CARD14Q9BXL6 1004 aa23.88■■□□□ 1.41
RANBP3-227ENST00000592266 MEGF6O75095 1541 aa23.88■■□□□ 1.41
RANBP3-227ENST00000592266 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
RANBP3-227ENST00000592266 HSP90AB2PQ58FF8 381 aa23.86■■□□□ 1.41
RANBP3-227ENST00000592266 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms