RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 AXIN2Q9Y2T1 843 aa26.02■■□□□ 1.76
CIRBP-237ENST00000592234 LRRC37A3O60309 1634 aa26■■□□□ 1.75
CIRBP-237ENST00000592234 WDR17Q8IZU2 1322 aa26■■□□□ 1.75
CIRBP-237ENST00000592234 PARD3Q8TEW0 1356 aa25.99■■□□□ 1.75
CIRBP-237ENST00000592234 TMC1Q8TDI8 760 aa25.99■■□□□ 1.75
CIRBP-237ENST00000592234 NFAT5O94916 1531 aa25.98■■□□□ 1.75
CIRBP-237ENST00000592234 R3HDM1Q15032 1099 aaKnown RBP25.98■■□□□ 1.75
CIRBP-237ENST00000592234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.98■■□□□ 1.75
CIRBP-237ENST00000592234 RREB1Q92766 1687 aa25.98■■□□□ 1.75
CIRBP-237ENST00000592234 C11orf95C9JLR9 678 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-237ENST00000592234 DDB1Q16531 1140 aa25.97■■□□□ 1.75
CIRBP-237ENST00000592234 SBF2Q86WG5 1849 aa25.97■■□□□ 1.75
CIRBP-237ENST00000592234 CD163L1Q9NR16 1453 aa25.97■■□□□ 1.75
CIRBP-237ENST00000592234 OVOS2A0A0G2JMS6 1433 aa25.97■■□□□ 1.75
CIRBP-237ENST00000592234 OVOS2A0A0J9YW53 1432 aa25.97■■□□□ 1.75
CIRBP-237ENST00000592234 OVOS2Q6IE36 1432 aa25.97■■□□□ 1.75
CIRBP-237ENST00000592234 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
CIRBP-237ENST00000592234 CSB-PGBD3P0DP91 1061 aa25.96■■□□□ 1.75
CIRBP-237ENST00000592234 HDGFL2Q7Z4V5 671 aaPredicted RBP25.96■■□□□ 1.75
CIRBP-237ENST00000592234 PEAK1Q9H792 1746 aa25.96■■□□□ 1.75
CIRBP-237ENST00000592234 NUP188Q5SRE5 1749 aa25.94■■□□□ 1.74
CIRBP-237ENST00000592234 LTN1O94822 1766 aa25.94■■□□□ 1.74
CIRBP-237ENST00000592234 USP31Q70CQ4 1352 aa25.94■■□□□ 1.74
CIRBP-237ENST00000592234 ABCC6O95255 1503 aa25.93■■□□□ 1.74
CIRBP-237ENST00000592234 CDCA7Q9BWT1 371 aaPredicted RBP25.93■■□□□ 1.74
CIRBP-237ENST00000592234 SLC12A5Q9H2X9 1139 aa25.93■■□□□ 1.74
CIRBP-237ENST00000592234 NME9Q86XW9 330 aa25.92■■□□□ 1.74
CIRBP-237ENST00000592234 CARD10Q9BWT7 1032 aa25.92■■□□□ 1.74
CIRBP-237ENST00000592234 EDC4Q6P2E9 1401 aaKnown RBP25.9■■□□□ 1.74
CIRBP-237ENST00000592234 PUS7Q96PZ0 661 aaKnown RBP25.9■■□□□ 1.74
CIRBP-237ENST00000592234 TERF2IPQ9NYB0 399 aa25.9■■□□□ 1.74
CIRBP-237ENST00000592234 A0A1W2PP64 1363 aa25.88■■□□□ 1.73
CIRBP-237ENST00000592234 CCDC7Q96M83 1385 aa25.87■■□□□ 1.73
CIRBP-237ENST00000592234 ST20-MTHFSA0A0A6YYL1 179 aa25.87■■□□□ 1.73
CIRBP-237ENST00000592234 NBPF14Q5TI25 921 aa25.87■■□□□ 1.73
CIRBP-237ENST00000592234 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
CIRBP-237ENST00000592234 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
CIRBP-237ENST00000592234 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
CIRBP-237ENST00000592234 TESK2Q96S53 571 aa25.85■■□□□ 1.73
CIRBP-237ENST00000592234 EXOC5O00471 708 aa25.83■■□□□ 1.73
CIRBP-237ENST00000592234 SLC24A1O60721 1099 aa25.83■■□□□ 1.73
CIRBP-237ENST00000592234 NINLQ9Y2I6 1382 aa25.82■■□□□ 1.72
CIRBP-237ENST00000592234 BCL11BQ9C0K0 894 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-237ENST00000592234 ERBB3P21860 1342 aa25.82■■□□□ 1.72
CIRBP-237ENST00000592234 BCL9O00512 1426 aa25.81■■□□□ 1.72
CIRBP-237ENST00000592234 PLSCR1O15162 318 aa25.81■■□□□ 1.72
CIRBP-237ENST00000592234 NLRP2Q9NX02 1062 aa25.8■■□□□ 1.72
CIRBP-237ENST00000592234 TNS2Q63HR2 1409 aa25.79■■□□□ 1.72
CIRBP-237ENST00000592234 PTF1AQ7RTS3 328 aa25.78■■□□□ 1.72
CIRBP-237ENST00000592234 ANKRD24Q8TF21 1146 aa25.78■■□□□ 1.72
CIRBP-237ENST00000592234 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
CIRBP-237ENST00000592234 KAT6BQ8WYB5 2073 aa25.76■■□□□ 1.71
CIRBP-237ENST00000592234 IL2RBP14784 551 aa25.74■■□□□ 1.71
CIRBP-237ENST00000592234 COG3Q96JB2 828 aa25.74■■□□□ 1.71
CIRBP-237ENST00000592234 FAM208AQ9UK61 1670 aaKnown RBP25.74■■□□□ 1.71
CIRBP-237ENST00000592234 USP47Q96K76 1375 aa25.73■■□□□ 1.71
CIRBP-237ENST00000592234 TMF1P82094 1093 aa25.73■■□□□ 1.71
CIRBP-237ENST00000592234 IP6K1Q92551 441 aa25.72■■□□□ 1.71
CIRBP-237ENST00000592234 ANKRD36BQ8N2N9 1353 aa25.71■■□□□ 1.71
CIRBP-237ENST00000592234 NHSQ6T4R5 1651 aa25.71■■□□□ 1.71
CIRBP-237ENST00000592234 LTV1Q96GA3 475 aaPredicted RBP25.69■■□□□ 1.7
CIRBP-237ENST00000592234 PROM2Q8N271 834 aa25.68■■□□□ 1.7
CIRBP-237ENST00000592234 ANO8Q9HCE9 1232 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-237ENST00000592234 KCNQ2O43526 872 aa25.67■■□□□ 1.7
CIRBP-237ENST00000592234 ACSBG1Q96GR2 724 aa25.67■■□□□ 1.7
CIRBP-237ENST00000592234 SPON1Q9HCB6 807 aa25.67■■□□□ 1.7
CIRBP-237ENST00000592234 MAP3K19Q56UN5 1328 aa25.66■■□□□ 1.7
CIRBP-237ENST00000592234 TXNRD1Q16881 649 aa25.66■■□□□ 1.7
CIRBP-237ENST00000592234 RGPD2P0DJD1 1756 aa25.66■■□□□ 1.7
CIRBP-237ENST00000592234 AMPHP49418 695 aa25.65■■□□□ 1.7
CIRBP-237ENST00000592234 CASZ1Q86V15 1759 aa25.64■■□□□ 1.7
CIRBP-237ENST00000592234 FBLN1P23142 703 aa25.64■■□□□ 1.7
CIRBP-237ENST00000592234 HOXC9P31274 260 aa25.64■■□□□ 1.7
CIRBP-237ENST00000592234 CDCA8Q53HL2 280 aa25.64■■□□□ 1.7
CIRBP-237ENST00000592234 BTAF1O14981 1849 aa25.64■■□□□ 1.7
CIRBP-237ENST00000592234 KIF20BQ96Q89 1820 aa25.64■■□□□ 1.7
CIRBP-237ENST00000592234 PPP1R1BQ9UD71 204 aaPredicted RBP25.63■■□□□ 1.69
CIRBP-237ENST00000592234 GGNBP2Q9H3C7 697 aa25.62■■□□□ 1.69
CIRBP-237ENST00000592234 STK32BQ9NY57 414 aa25.61■■□□□ 1.69
CIRBP-237ENST00000592234 FYB1O15117 783 aa25.6■■□□□ 1.69
CIRBP-237ENST00000592234 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
CIRBP-237ENST00000592234 RTL1A6NKG5 1358 aa25.58■■□□□ 1.69
CIRBP-237ENST00000592234 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
CIRBP-237ENST00000592234 DDX54Q8TDD1 881 aaKnown RBP25.58■■□□□ 1.69
CIRBP-237ENST00000592234 SLC15A2Q16348 729 aa25.57■■□□□ 1.68
CIRBP-237ENST00000592234 MYOM1P52179 1685 aa25.57■■□□□ 1.68
CIRBP-237ENST00000592234 PDGFDQ9GZP0 370 aaPredicted RBP25.56■■□□□ 1.68
CIRBP-237ENST00000592234 CLSPNQ9HAW4 1339 aa25.56■■□□□ 1.68
CIRBP-237ENST00000592234 SHANK3Q9BYB0 1731 aa25.54■■□□□ 1.68
CIRBP-237ENST00000592234 ZBTB7AO95365 584 aa25.53■■□□□ 1.68
CIRBP-237ENST00000592234 SMG6Q86US8 1419 aaKnown RBP25.53■■□□□ 1.68
CIRBP-237ENST00000592234 DOT1LQ8TEK3 1739 aa25.52■■□□□ 1.68
CIRBP-237ENST00000592234 PAPPAQ13219 1627 aa25.52■■□□□ 1.68
CIRBP-237ENST00000592234 MEGF6O75095 1541 aa25.51■■□□□ 1.67
CIRBP-237ENST00000592234 NBPF6Q5VWK0 638 aa25.5■■□□□ 1.67
CIRBP-237ENST00000592234 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
CIRBP-237ENST00000592234 NBPF4Q96M43 638 aa25.5■■□□□ 1.67
CIRBP-237ENST00000592234 NSD3Q9BZ95 1437 aa25.49■■□□□ 1.67
CIRBP-237ENST00000592234 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
CIRBP-237ENST00000592234 SYTL4Q96C24 671 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms