RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
SEH1L-208ENST00000590843 C14orf93Q9H972 538 aaKnown RBP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
SEH1L-208ENST00000590843 C6orf229H3BNL8 230 aa13.99□□□□□ -0.17
SEH1L-208ENST00000590843 RBM6P78332 1123 aaKnown RBP13.99□□□□□ -0.17
SEH1L-208ENST00000590843 KIF16BQ96L93 1317 aa13.99□□□□□ -0.17
SEH1L-208ENST00000590843 ZSCAN25Q6NSZ9 544 aa13.98□□□□□ -0.17
SEH1L-208ENST00000590843 GRM1Q13255 1194 aa13.98□□□□□ -0.17
SEH1L-208ENST00000590843 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
SEH1L-208ENST00000590843 NAIPQ13075 1403 aa13.98□□□□□ -0.17
SEH1L-208ENST00000590843 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
SEH1L-208ENST00000590843 L1TD1Q5T7N2 865 aaKnown RBP13.98□□□□□ -0.17
SEH1L-208ENST00000590843 SUPT20HQ8NEM7 779 aa13.98□□□□□ -0.17
SEH1L-208ENST00000590843 DIAPH3Q9NSV4 1193 aa13.98□□□□□ -0.17
SEH1L-208ENST00000590843 PRKAR2BP31323 418 aa13.97□□□□□ -0.17
SEH1L-208ENST00000590843 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
SEH1L-208ENST00000590843 ACEP12821 1306 aa13.97□□□□□ -0.17
SEH1L-208ENST00000590843 ZNF219Q9P2Y4 722 aaPredicted RBP13.97□□□□□ -0.17
SEH1L-208ENST00000590843 NOS1P29475 1434 aa13.97□□□□□ -0.17
SEH1L-208ENST00000590843 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
SEH1L-208ENST00000590843 SOGA3Q5TF21 947 aa13.97□□□□□ -0.17
SEH1L-208ENST00000590843 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
SEH1L-208ENST00000590843 FAM98CQ17RN3 349 aaKnown RBP13.96□□□□□ -0.17
SEH1L-208ENST00000590843 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
SEH1L-208ENST00000590843 NACAP1Q9BZK3 213 aa13.96□□□□□ -0.18
SEH1L-208ENST00000590843 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.18
SEH1L-208ENST00000590843 PBRM1Q86U86 1689 aa13.96□□□□□ -0.18
SEH1L-208ENST00000590843 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
SEH1L-208ENST00000590843 IFIT1P09914 478 aaKnown RBP13.95□□□□□ -0.18
SEH1L-208ENST00000590843 KIAA2012Q0VF49 1180 aa13.95□□□□□ -0.18
SEH1L-208ENST00000590843 ACSBG1Q96GR2 724 aa13.95□□□□□ -0.18
SEH1L-208ENST00000590843 TPTE2Q6XPS3 522 aa13.95□□□□□ -0.18
SEH1L-208ENST00000590843 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
SEH1L-208ENST00000590843 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
SEH1L-208ENST00000590843 SYCP2Q9BX26 1530 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 NLRP1Q9C000 1473 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 ABCC5O15440 1437 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 TMEM2Q9UHN6 1383 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 FYB1O15117 783 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 LDHCP07864 332 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 TRIM29Q14134 588 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 TTC39AQ5SRH9 613 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
SEH1L-208ENST00000590843 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
SEH1L-208ENST00000590843 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
SEH1L-208ENST00000590843 CRACR2BQ8N4Y2 399 aaPredicted RBP13.93□□□□□ -0.18
SEH1L-208ENST00000590843 TRMT112Q9UI30 125 aaKnown RBP13.93□□□□□ -0.18
SEH1L-208ENST00000590843 MYL6BP14649 208 aa13.92□□□□□ -0.18
SEH1L-208ENST00000590843 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
SEH1L-208ENST00000590843 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
SEH1L-208ENST00000590843 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
SEH1L-208ENST00000590843 RALYLQ86SE5 291 aaKnown RBP13.92□□□□□ -0.18
SEH1L-208ENST00000590843 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SEH1L-208ENST00000590843 MAP3K1Q13233 1512 aa13.91□□□□□ -0.18
SEH1L-208ENST00000590843 H0YIN7 160 aa13.91□□□□□ -0.18
SEH1L-208ENST00000590843 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
SEH1L-208ENST00000590843 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
SEH1L-208ENST00000590843 MAPKBP1O60336 1514 aa13.91□□□□□ -0.18
SEH1L-208ENST00000590843 TNNI2P48788 182 aa13.9□□□□□ -0.18
SEH1L-208ENST00000590843 SPATA31A6Q5VVP1 1343 aa13.9□□□□□ -0.18
SEH1L-208ENST00000590843 JCADQ9P266 1359 aa13.9□□□□□ -0.18
SEH1L-208ENST00000590843 XBP1P17861 261 aa13.9□□□□□ -0.18
SEH1L-208ENST00000590843 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
SEH1L-208ENST00000590843 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
SEH1L-208ENST00000590843 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
SEH1L-208ENST00000590843 AKAP2Q9Y2D5 859 aa13.89□□□□□ -0.19
SEH1L-208ENST00000590843 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
SEH1L-208ENST00000590843 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
SEH1L-208ENST00000590843 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
SEH1L-208ENST00000590843 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
SEH1L-208ENST00000590843 SPTY2D1Q68D10 685 aaPredicted RBP13.89□□□□□ -0.19
SEH1L-208ENST00000590843 TAF7Q15545 349 aaPredicted RBP13.88□□□□□ -0.19
SEH1L-208ENST00000590843 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
SEH1L-208ENST00000590843 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 PRM3Q9NNZ6 103 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 NSD2O96028 1365 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 RGS3P49796 1198 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
SEH1L-208ENST00000590843 CEP89Q96ST8 783 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
SEH1L-208ENST00000590843 MAGI3Q5TCQ9 1506 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 B4DLN1 442 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
SEH1L-208ENST00000590843 KIF22Q14807 665 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 GNPATO15228 680 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 GCP02774 474 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
SEH1L-208ENST00000590843 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 CPLX1O14810 134 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
SEH1L-208ENST00000590843 HIP1O00291 1037 aa13.86□□□□□ -0.19
SEH1L-208ENST00000590843 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
SEH1L-208ENST00000590843 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms