RNA–Protein interactions for RNA: ENST00000590746.5

RTN2-209, Transcript of reticulon 2, humanhuman

TSL 3

Gene RTN2, Length 228 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-209ENST00000590746 MYT1Q01538 1121 aa13.11□□□□□ -0.31
RTN2-209ENST00000590746 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
RTN2-209ENST00000590746 NFAT5O94916 1531 aa13.11□□□□□ -0.31
RTN2-209ENST00000590746 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
RTN2-209ENST00000590746 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
RTN2-209ENST00000590746 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
RTN2-209ENST00000590746 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
RTN2-209ENST00000590746 SEPT12Q8IYM1 358 aa13.1□□□□□ -0.31
RTN2-209ENST00000590746 IP6K1Q92551 441 aa13.1□□□□□ -0.31
RTN2-209ENST00000590746 LTV1Q96GA3 475 aaPredicted RBP13.1□□□□□ -0.31
RTN2-209ENST00000590746 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
RTN2-209ENST00000590746 SOCS7O14512 581 aa13.09□□□□□ -0.31
RTN2-209ENST00000590746 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
RTN2-209ENST00000590746 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
RTN2-209ENST00000590746 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
RTN2-209ENST00000590746 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
RTN2-209ENST00000590746 RGS12O14924 1447 aa13.08□□□□□ -0.32
RTN2-209ENST00000590746 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
RTN2-209ENST00000590746 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
RTN2-209ENST00000590746 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
RTN2-209ENST00000590746 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
RTN2-209ENST00000590746 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
RTN2-209ENST00000590746 HOXC9P31274 260 aa13.07□□□□□ -0.32
RTN2-209ENST00000590746 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
RTN2-209ENST00000590746 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
RTN2-209ENST00000590746 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
RTN2-209ENST00000590746 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.07□□□□□ -0.32
RTN2-209ENST00000590746 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
RTN2-209ENST00000590746 GLI3P10071 1580 aa13.07□□□□□ -0.32
RTN2-209ENST00000590746 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
RTN2-209ENST00000590746 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
RTN2-209ENST00000590746 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
RTN2-209ENST00000590746 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
RTN2-209ENST00000590746 COL18A1P39060 1754 aa13.05□□□□□ -0.32
RTN2-209ENST00000590746 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
RTN2-209ENST00000590746 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
RTN2-209ENST00000590746 ERBB3P21860 1342 aa13.05□□□□□ -0.32
RTN2-209ENST00000590746 CRB1P82279 1406 aa13.05□□□□□ -0.32
RTN2-209ENST00000590746 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
RTN2-209ENST00000590746 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
RTN2-209ENST00000590746 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
RTN2-209ENST00000590746 NSD2O96028 1365 aa13.04□□□□□ -0.32
RTN2-209ENST00000590746 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
RTN2-209ENST00000590746 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
RTN2-209ENST00000590746 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
RTN2-209ENST00000590746 BLMP54132 1417 aaPredicted RBP13.02□□□□□ -0.33
RTN2-209ENST00000590746 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
RTN2-209ENST00000590746 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
RTN2-209ENST00000590746 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
RTN2-209ENST00000590746 FLT4P35916 1363 aa13.01□□□□□ -0.33
RTN2-209ENST00000590746 LTN1O94822 1766 aa13.01□□□□□ -0.33
RTN2-209ENST00000590746 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
RTN2-209ENST00000590746 ABCC6O95255 1503 aa13□□□□□ -0.33
RTN2-209ENST00000590746 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
RTN2-209ENST00000590746 NBPF4Q96M43 638 aa13□□□□□ -0.33
RTN2-209ENST00000590746 INSRP06213 1382 aa12.99□□□□□ -0.33
RTN2-209ENST00000590746 KIF24Q5T7B8 1368 aa12.99□□□□□ -0.33
RTN2-209ENST00000590746 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
RTN2-209ENST00000590746 EXOC5O00471 708 aa12.98□□□□□ -0.33
RTN2-209ENST00000590746 MTHFSP49914 203 aa12.98□□□□□ -0.33
RTN2-209ENST00000590746 DDB1Q16531 1140 aa12.98□□□□□ -0.33
RTN2-209ENST00000590746 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
RTN2-209ENST00000590746 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
RTN2-209ENST00000590746 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
RTN2-209ENST00000590746 IL2RBP14784 551 aa12.97□□□□□ -0.33
RTN2-209ENST00000590746 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
RTN2-209ENST00000590746 EP400Q96L91 3159 aa12.96□□□□□ -0.33
RTN2-209ENST00000590746 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
RTN2-209ENST00000590746 PEAK1Q9H792 1746 aa12.96□□□□□ -0.34
RTN2-209ENST00000590746 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
RTN2-209ENST00000590746 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
RTN2-209ENST00000590746 EYA1Q99502 592 aa12.95□□□□□ -0.34
RTN2-209ENST00000590746 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
RTN2-209ENST00000590746 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
RTN2-209ENST00000590746 BRWD3Q6RI45 1802 aa12.94□□□□□ -0.34
RTN2-209ENST00000590746 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
RTN2-209ENST00000590746 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
RTN2-209ENST00000590746 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
RTN2-209ENST00000590746 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
RTN2-209ENST00000590746 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
RTN2-209ENST00000590746 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
RTN2-209ENST00000590746 TRIM37O94972 964 aa12.91□□□□□ -0.34
RTN2-209ENST00000590746 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
RTN2-209ENST00000590746 IL13P35225 146 aa12.91□□□□□ -0.34
RTN2-209ENST00000590746 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
RTN2-209ENST00000590746 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
RTN2-209ENST00000590746 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
RTN2-209ENST00000590746 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
RTN2-209ENST00000590746 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
RTN2-209ENST00000590746 MEGF6O75095 1541 aa12.88□□□□□ -0.35
RTN2-209ENST00000590746 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
RTN2-209ENST00000590746 DEFB132Q7Z7B7 95 aa12.88□□□□□ -0.35
RTN2-209ENST00000590746 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
RTN2-209ENST00000590746 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
RTN2-209ENST00000590746 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
RTN2-209ENST00000590746 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
RTN2-209ENST00000590746 RALBP1Q15311 655 aa12.87□□□□□ -0.35
RTN2-209ENST00000590746 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
RTN2-209ENST00000590746 OVOS2A0A0G2JMS6 1433 aa12.87□□□□□ -0.35
RTN2-209ENST00000590746 TNS2Q63HR2 1409 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms