RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 KIF20BQ96Q89 1820 aa19.59■□□□□ 0.73
CALR-207ENST00000590325 COL5A2P05997 1499 aaPredicted RBP19.59■□□□□ 0.73
CALR-207ENST00000590325 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
CALR-207ENST00000590325 IP6K1Q92551 441 aa19.58■□□□□ 0.72
CALR-207ENST00000590325 CCDC9Q9Y3X0 531 aaKnown RBP19.58■□□□□ 0.72
CALR-207ENST00000590325 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.58■□□□□ 0.72
CALR-207ENST00000590325 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
CALR-207ENST00000590325 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
CALR-207ENST00000590325 NRAPQ86VF7 1730 aa19.57■□□□□ 0.72
CALR-207ENST00000590325 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
CALR-207ENST00000590325 AMPHP49418 695 aa19.57■□□□□ 0.72
CALR-207ENST00000590325 MORC1Q86VD1 984 aa19.57■□□□□ 0.72
CALR-207ENST00000590325 COL18A1P39060 1754 aa19.57■□□□□ 0.72
CALR-207ENST00000590325 ABCC6O95255 1503 aa19.56■□□□□ 0.72
CALR-207ENST00000590325 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
CALR-207ENST00000590325 SPATA31A1Q5TZJ5 1347 aa19.55■□□□□ 0.72
CALR-207ENST00000590325 HOXC9P31274 260 aa19.55■□□□□ 0.72
CALR-207ENST00000590325 CC2D1BQ5T0F9 858 aaKnown RBP19.55■□□□□ 0.72
CALR-207ENST00000590325 WDR17Q8IZU2 1322 aa19.54■□□□□ 0.72
CALR-207ENST00000590325 POLKQ9UBT6 870 aa19.54■□□□□ 0.72
CALR-207ENST00000590325 EMILIN1Q9Y6C2 1016 aa19.54■□□□□ 0.72
CALR-207ENST00000590325 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
CALR-207ENST00000590325 ERBB3P21860 1342 aa19.53■□□□□ 0.72
CALR-207ENST00000590325 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
CALR-207ENST00000590325 DDX10Q13206 875 aaKnown RBP19.53■□□□□ 0.72
CALR-207ENST00000590325 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
CALR-207ENST00000590325 CDK12Q9NYV4 1490 aaPredicted RBP19.53■□□□□ 0.72
CALR-207ENST00000590325 GLI3P10071 1580 aa19.53■□□□□ 0.72
CALR-207ENST00000590325 CRB1P82279 1406 aa19.52■□□□□ 0.72
CALR-207ENST00000590325 ONECUT3O60422 494 aaPredicted RBP19.52■□□□□ 0.72
CALR-207ENST00000590325 CSB-PGBD3P0DP91 1061 aa19.52■□□□□ 0.72
CALR-207ENST00000590325 ANKRD24Q8TF21 1146 aa19.52■□□□□ 0.72
CALR-207ENST00000590325 USP35Q9P2H5 1018 aa19.52■□□□□ 0.72
CALR-207ENST00000590325 RGS12O14924 1447 aa19.51■□□□□ 0.71
CALR-207ENST00000590325 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
CALR-207ENST00000590325 FAM98CQ17RN3 349 aaKnown RBP19.51■□□□□ 0.71
CALR-207ENST00000590325 HSP90AB2PQ58FF8 381 aa19.51■□□□□ 0.71
CALR-207ENST00000590325 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
CALR-207ENST00000590325 FLT4P35916 1363 aa19.51■□□□□ 0.71
CALR-207ENST00000590325 PPM1GO15355 546 aaPredicted RBP19.5■□□□□ 0.71
CALR-207ENST00000590325 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
CALR-207ENST00000590325 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
CALR-207ENST00000590325 LTN1O94822 1766 aa19.49■□□□□ 0.71
CALR-207ENST00000590325 ANKRD26Q9UPS8 1709 aa19.49■□□□□ 0.71
CALR-207ENST00000590325 LTV1Q96GA3 475 aaPredicted RBP19.49■□□□□ 0.71
CALR-207ENST00000590325 CARD10Q9BWT7 1032 aa19.49■□□□□ 0.71
CALR-207ENST00000590325 INSRP06213 1382 aa19.48■□□□□ 0.71
CALR-207ENST00000590325 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
CALR-207ENST00000590325 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
CALR-207ENST00000590325 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
CALR-207ENST00000590325 NLRP2Q9NX02 1062 aa19.47■□□□□ 0.71
CALR-207ENST00000590325 PEAK1Q9H792 1746 aa19.46■□□□□ 0.71
CALR-207ENST00000590325 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
CALR-207ENST00000590325 A0A0G2JS52 829 aa19.44■□□□□ 0.7
CALR-207ENST00000590325 MYT1Q01538 1121 aa19.44■□□□□ 0.7
CALR-207ENST00000590325 RGPD5Q99666 1765 aa19.44■□□□□ 0.7
CALR-207ENST00000590325 MTHFSP49914 203 aa19.42■□□□□ 0.7
CALR-207ENST00000590325 NBPF6Q5VWK0 638 aa19.42■□□□□ 0.7
CALR-207ENST00000590325 NBPF4Q96M43 638 aa19.42■□□□□ 0.7
CALR-207ENST00000590325 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
CALR-207ENST00000590325 EP400Q96L91 3159 aa19.4■□□□□ 0.7
CALR-207ENST00000590325 CDCA7Q9BWT1 371 aaPredicted RBP19.39■□□□□ 0.69
CALR-207ENST00000590325 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
CALR-207ENST00000590325 THSD7AQ9UPZ6 1657 aa19.39■□□□□ 0.69
CALR-207ENST00000590325 MAP2P11137 1827 aaKnown RBP19.38■□□□□ 0.69
CALR-207ENST00000590325 KRT27Q7Z3Y8 459 aa19.38■□□□□ 0.69
CALR-207ENST00000590325 PARD3Q8TEW0 1356 aa19.38■□□□□ 0.69
CALR-207ENST00000590325 PPP2R1AP30153 589 aa19.37■□□□□ 0.69
CALR-207ENST00000590325 USHBP1Q8N6Y0 703 aa19.37■□□□□ 0.69
CALR-207ENST00000590325 EYA1Q99502 592 aa19.37■□□□□ 0.69
CALR-207ENST00000590325 IL2RBP14784 551 aa19.36■□□□□ 0.69
CALR-207ENST00000590325 IL13P35225 146 aa19.35■□□□□ 0.69
CALR-207ENST00000590325 SOCS7O14512 581 aa19.34■□□□□ 0.69
CALR-207ENST00000590325 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
CALR-207ENST00000590325 RALBP1Q15311 655 aa19.34■□□□□ 0.69
CALR-207ENST00000590325 DDB1Q16531 1140 aa19.34■□□□□ 0.69
CALR-207ENST00000590325 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.69
CALR-207ENST00000590325 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
CALR-207ENST00000590325 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
CALR-207ENST00000590325 EXOC5O00471 708 aa19.32■□□□□ 0.68
CALR-207ENST00000590325 FAM182BQ5T319 152 aa19.31■□□□□ 0.68
CALR-207ENST00000590325 DIAPH1O60610 1272 aaKnown RBP19.3■□□□□ 0.68
CALR-207ENST00000590325 RAPGEF4Q8WZA2 1011 aa19.3■□□□□ 0.68
CALR-207ENST00000590325 MEGF6O75095 1541 aa19.3■□□□□ 0.68
CALR-207ENST00000590325 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
CALR-207ENST00000590325 CFAP53Q96M91 514 aa19.29■□□□□ 0.68
CALR-207ENST00000590325 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
CALR-207ENST00000590325 BRWD3Q6RI45 1802 aa19.28■□□□□ 0.68
CALR-207ENST00000590325 OVOS2A0A0G2JMS6 1433 aa19.28■□□□□ 0.68
CALR-207ENST00000590325 TNS2Q63HR2 1409 aa19.28■□□□□ 0.68
CALR-207ENST00000590325 TATP17735 454 aaPredicted RBP19.28■□□□□ 0.68
CALR-207ENST00000590325 MARCH10Q8NA82 808 aaPredicted RBP19.28■□□□□ 0.68
CALR-207ENST00000590325 LRRC37A3O60309 1634 aa19.28■□□□□ 0.68
CALR-207ENST00000590325 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.68
CALR-207ENST00000590325 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
CALR-207ENST00000590325 UPF1Q92900 1129 aaKnown RBP eCLIP19.27■□□□□ 0.68
CALR-207ENST00000590325 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.68
CALR-207ENST00000590325 WNK3Q9BYP7 1800 aa19.26■□□□□ 0.67
CALR-207ENST00000590325 SULT6B1Q6IMI4 303 aa19.26■□□□□ 0.67
CALR-207ENST00000590325 FAM196AQ6ZSG2 479 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms