RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 NLRP6P59044 892 aa20.45■□□□□ 0.86
CROCCP3-204ENST00000590118 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
CROCCP3-204ENST00000590118 ATF5Q9Y2D1 282 aaPredicted RBP20.45■□□□□ 0.86
CROCCP3-204ENST00000590118 COL18A1P39060 1754 aa20.44■□□□□ 0.86
CROCCP3-204ENST00000590118 SLIT3O75094 1523 aa20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 CHD4Q14839 1912 aa20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 SYT17Q9BSW7 474 aa20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 CDCA7Q9BWT1 371 aaPredicted RBP20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 CABP2Q9NPB3 220 aa20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 KIAA1210Q9ULL0 1709 aa20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 WNK3Q9BYP7 1800 aa20.43■□□□□ 0.86
CROCCP3-204ENST00000590118 AKAP12Q02952 1782 aa20.42■□□□□ 0.86
CROCCP3-204ENST00000590118 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
CROCCP3-204ENST00000590118 FHDC1Q9C0D6 1143 aaPredicted RBP20.42■□□□□ 0.86
CROCCP3-204ENST00000590118 STK32BQ9NY57 414 aa20.42■□□□□ 0.86
CROCCP3-204ENST00000590118 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
CROCCP3-204ENST00000590118 WDR17Q8IZU2 1322 aa20.42■□□□□ 0.86
CROCCP3-204ENST00000590118 SLC15A2Q16348 729 aa20.41■□□□□ 0.86
CROCCP3-204ENST00000590118 NBPF1Q3BBV0 1214 aa20.41■□□□□ 0.86
CROCCP3-204ENST00000590118 USP6P35125 1406 aa20.41■□□□□ 0.86
CROCCP3-204ENST00000590118 UTRNP46939 3433 aa20.39■□□□□ 0.86
CROCCP3-204ENST00000590118 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
CROCCP3-204ENST00000590118 CENPJQ9HC77 1338 aaPredicted RBP20.38■□□□□ 0.85
CROCCP3-204ENST00000590118 SGIP1Q9BQI5 828 aa20.38■□□□□ 0.85
CROCCP3-204ENST00000590118 MTFR1LQ9H019 292 aa20.38■□□□□ 0.85
CROCCP3-204ENST00000590118 RGPD5Q99666 1765 aa20.37■□□□□ 0.85
CROCCP3-204ENST00000590118 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
CROCCP3-204ENST00000590118 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
CROCCP3-204ENST00000590118 ARHGEF25Q86VW2 580 aa20.36■□□□□ 0.85
CROCCP3-204ENST00000590118 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
CROCCP3-204ENST00000590118 PIK3C2AO00443 1686 aa20.35■□□□□ 0.85
CROCCP3-204ENST00000590118 EXOC5O00471 708 aa20.35■□□□□ 0.85
CROCCP3-204ENST00000590118 C1QTNF8P60827 252 aa20.35■□□□□ 0.85
CROCCP3-204ENST00000590118 CSB-PGBD3P0DP91 1061 aa20.33■□□□□ 0.85
CROCCP3-204ENST00000590118 KCNH5Q8NCM2 988 aa20.32■□□□□ 0.84
CROCCP3-204ENST00000590118 ARXQ96QS3 562 aa20.32■□□□□ 0.84
CROCCP3-204ENST00000590118 QRICH2Q9H0J4 1663 aa20.32■□□□□ 0.84
CROCCP3-204ENST00000590118 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
CROCCP3-204ENST00000590118 CCDC7Q96M83 1385 aa20.3■□□□□ 0.84
CROCCP3-204ENST00000590118 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
CROCCP3-204ENST00000590118 SOX12O15370 315 aa20.29■□□□□ 0.84
CROCCP3-204ENST00000590118 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
CROCCP3-204ENST00000590118 TNS2Q63HR2 1409 aa20.28■□□□□ 0.84
CROCCP3-204ENST00000590118 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
CROCCP3-204ENST00000590118 NHSQ6T4R5 1651 aa20.28■□□□□ 0.84
CROCCP3-204ENST00000590118 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
CROCCP3-204ENST00000590118 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
CROCCP3-204ENST00000590118 PAPPAQ13219 1627 aa20.27■□□□□ 0.83
CROCCP3-204ENST00000590118 EVC2Q86UK5 1308 aa20.26■□□□□ 0.83
CROCCP3-204ENST00000590118 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
CROCCP3-204ENST00000590118 NFAT5O94916 1531 aa20.24■□□□□ 0.83
CROCCP3-204ENST00000590118 GPR162Q16538 588 aa20.24■□□□□ 0.83
CROCCP3-204ENST00000590118 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
CROCCP3-204ENST00000590118 BTAF1O14981 1849 aa20.23■□□□□ 0.83
CROCCP3-204ENST00000590118 ABCC6O95255 1503 aa20.22■□□□□ 0.83
CROCCP3-204ENST00000590118 LRRC4BQ9NT99 713 aa20.21■□□□□ 0.83
CROCCP3-204ENST00000590118 GIGYF1O75420 1035 aaPredicted RBP20.19■□□□□ 0.82
CROCCP3-204ENST00000590118 IL2RBP14784 551 aa20.19■□□□□ 0.82
CROCCP3-204ENST00000590118 IFFO2Q5TF58 517 aa20.19■□□□□ 0.82
CROCCP3-204ENST00000590118 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
CROCCP3-204ENST00000590118 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
CROCCP3-204ENST00000590118 ERBB3P21860 1342 aa20.19■□□□□ 0.82
CROCCP3-204ENST00000590118 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
CROCCP3-204ENST00000590118 KLHL34Q8N239 644 aa20.17■□□□□ 0.82
CROCCP3-204ENST00000590118 KTN1Q86UP2 1357 aaKnown RBP20.17■□□□□ 0.82
CROCCP3-204ENST00000590118 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
CROCCP3-204ENST00000590118 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
CROCCP3-204ENST00000590118 POLD1P28340 1107 aa20.15■□□□□ 0.82
CROCCP3-204ENST00000590118 USP31Q70CQ4 1352 aa20.14■□□□□ 0.81
CROCCP3-204ENST00000590118 SLC27A3Q5K4L6 730 aa20.14■□□□□ 0.81
CROCCP3-204ENST00000590118 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-204ENST00000590118 PNPLA7Q6ZV29 1317 aa20.13■□□□□ 0.81
CROCCP3-204ENST00000590118 LTN1O94822 1766 aa20.13■□□□□ 0.81
CROCCP3-204ENST00000590118 MON2Q7Z3U7 1717 aa20.13■□□□□ 0.81
CROCCP3-204ENST00000590118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.12■□□□□ 0.81
CROCCP3-204ENST00000590118 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
CROCCP3-204ENST00000590118 USP54Q70EL1 1684 aa20.11■□□□□ 0.81
CROCCP3-204ENST00000590118 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
CROCCP3-204ENST00000590118 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
CROCCP3-204ENST00000590118 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
CROCCP3-204ENST00000590118 TUBGCP6Q96RT7 1819 aa20.11■□□□□ 0.81
CROCCP3-204ENST00000590118 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
CROCCP3-204ENST00000590118 NME9Q86XW9 330 aa20.09■□□□□ 0.81
CROCCP3-204ENST00000590118 DDX54Q8TDD1 881 aaKnown RBP20.08■□□□□ 0.81
CROCCP3-204ENST00000590118 GRIN3BO60391 1043 aa20.07■□□□□ 0.8
CROCCP3-204ENST00000590118 KCNQ4P56696 695 aa20.07■□□□□ 0.8
CROCCP3-204ENST00000590118 YBX3P16989 372 aaKnown RBP eCLIP20.06■□□□□ 0.8
CROCCP3-204ENST00000590118 GOLGB1Q14789 3259 aaKnown RBP20.06■□□□□ 0.8
CROCCP3-204ENST00000590118 ROCK2O75116 1388 aaKnown RBP20.06■□□□□ 0.8
CROCCP3-204ENST00000590118 SBNO2Q9Y2G9 1366 aa20.06■□□□□ 0.8
CROCCP3-204ENST00000590118 CD163L1Q9NR16 1453 aa20.05■□□□□ 0.8
CROCCP3-204ENST00000590118 PRIM1P49642 420 aaKnown RBP20.04■□□□□ 0.8
CROCCP3-204ENST00000590118 LY75O60449 1722 aa20.04■□□□□ 0.8
CROCCP3-204ENST00000590118 SYTL4Q96C24 671 aaPredicted RBP20.03■□□□□ 0.8
CROCCP3-204ENST00000590118 IP6K1Q92551 441 aa20.02■□□□□ 0.8
CROCCP3-204ENST00000590118 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
CROCCP3-204ENST00000590118 CEP350Q5VT06 3117 aa20.02■□□□□ 0.79
CROCCP3-204ENST00000590118 NSD2O96028 1365 aa20■□□□□ 0.79
CROCCP3-204ENST00000590118 DOT1LQ8TEK3 1739 aa20■□□□□ 0.79
CROCCP3-204ENST00000590118 COL23A1Q86Y22 540 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms