RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
VAT1-207ENST00000589828 PEAK1Q9H792 1746 aa11.77□□□□□ -0.53
VAT1-207ENST00000589828 CRB1P82279 1406 aa11.77□□□□□ -0.53
VAT1-207ENST00000589828 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
VAT1-207ENST00000589828 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
VAT1-207ENST00000589828 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
VAT1-207ENST00000589828 DCAF11Q8TEB1 546 aa11.76□□□□□ -0.53
VAT1-207ENST00000589828 MYOM1P52179 1685 aa11.75□□□□□ -0.53
VAT1-207ENST00000589828 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
VAT1-207ENST00000589828 STK32BQ9NY57 414 aa11.75□□□□□ -0.53
VAT1-207ENST00000589828 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
VAT1-207ENST00000589828 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
VAT1-207ENST00000589828 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
VAT1-207ENST00000589828 BCL9O00512 1426 aa11.73□□□□□ -0.53
VAT1-207ENST00000589828 AATKQ6ZMQ8 1374 aa11.73□□□□□ -0.53
VAT1-207ENST00000589828 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
VAT1-207ENST00000589828 ARXQ96QS3 562 aa11.72□□□□□ -0.53
VAT1-207ENST00000589828 LRRC37A3O60309 1634 aa11.71□□□□□ -0.53
VAT1-207ENST00000589828 RGPD3A6NKT7 1758 aaPredicted RBP11.7□□□□□ -0.54
VAT1-207ENST00000589828 RGPD4Q7Z3J3 1758 aa11.7□□□□□ -0.54
VAT1-207ENST00000589828 WDR17Q8IZU2 1322 aa11.7□□□□□ -0.54
VAT1-207ENST00000589828 NLRP6P59044 892 aa11.7□□□□□ -0.54
VAT1-207ENST00000589828 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
VAT1-207ENST00000589828 MAP3K5Q99683 1374 aa11.69□□□□□ -0.54
VAT1-207ENST00000589828 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
VAT1-207ENST00000589828 PPIP5K1Q6PFW1 1433 aa11.69□□□□□ -0.54
VAT1-207ENST00000589828 TOPAZ1Q8N9V7 1692 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
VAT1-207ENST00000589828 GPR162Q16538 588 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 ZNF827Q17R98 1081 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 ARHGEF25Q86VW2 580 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 ACSBG1Q96GR2 724 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 ARHGEF28Q8N1W1 1705 aaKnown RBP11.68□□□□□ -0.54
VAT1-207ENST00000589828 UTRNP46939 3433 aa11.68□□□□□ -0.54
VAT1-207ENST00000589828 SLIT3O75094 1523 aa11.67□□□□□ -0.54
VAT1-207ENST00000589828 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
VAT1-207ENST00000589828 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
VAT1-207ENST00000589828 NBPF1Q3BBV0 1214 aa11.67□□□□□ -0.54
VAT1-207ENST00000589828 CDCA7Q9BWT1 371 aaPredicted RBP11.67□□□□□ -0.54
VAT1-207ENST00000589828 CABP1Q9NZU7 370 aa11.67□□□□□ -0.54
VAT1-207ENST00000589828 USP6P35125 1406 aa11.67□□□□□ -0.54
VAT1-207ENST00000589828 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
VAT1-207ENST00000589828 EXOC5O00471 708 aa11.66□□□□□ -0.54
VAT1-207ENST00000589828 LRRC4BQ9NT99 713 aa11.66□□□□□ -0.54
VAT1-207ENST00000589828 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
VAT1-207ENST00000589828 RAB3GAP2Q9H2M9 1393 aa11.66□□□□□ -0.54
VAT1-207ENST00000589828 RNF39Q9H2S5 420 aa11.65□□□□□ -0.54
VAT1-207ENST00000589828 CPSF1Q10570 1443 aaKnown RBP11.65□□□□□ -0.54
VAT1-207ENST00000589828 COL18A1P39060 1754 aa11.64□□□□□ -0.55
VAT1-207ENST00000589828 SOX12O15370 315 aa11.64□□□□□ -0.55
VAT1-207ENST00000589828 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
VAT1-207ENST00000589828 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
VAT1-207ENST00000589828 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
VAT1-207ENST00000589828 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
VAT1-207ENST00000589828 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
VAT1-207ENST00000589828 TNS2Q63HR2 1409 aa11.62□□□□□ -0.55
VAT1-207ENST00000589828 PAPPAQ13219 1627 aa11.62□□□□□ -0.55
VAT1-207ENST00000589828 TTC21BQ7Z4L5 1316 aa11.61□□□□□ -0.55
VAT1-207ENST00000589828 CENPJQ9HC77 1338 aaPredicted RBP11.61□□□□□ -0.55
VAT1-207ENST00000589828 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
VAT1-207ENST00000589828 CCDC7Q96M83 1385 aa11.61□□□□□ -0.55
VAT1-207ENST00000589828 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
VAT1-207ENST00000589828 KCNQ4P56696 695 aa11.6□□□□□ -0.55
VAT1-207ENST00000589828 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
VAT1-207ENST00000589828 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
VAT1-207ENST00000589828 SLC16A10Q8TF71 515 aa11.59□□□□□ -0.55
VAT1-207ENST00000589828 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
VAT1-207ENST00000589828 CHD4Q14839 1912 aa11.58□□□□□ -0.55
VAT1-207ENST00000589828 POLD1P28340 1107 aa11.58□□□□□ -0.56
VAT1-207ENST00000589828 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
VAT1-207ENST00000589828 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
VAT1-207ENST00000589828 ERBB3P21860 1342 aa11.57□□□□□ -0.56
VAT1-207ENST00000589828 NFAT5O94916 1531 aa11.56□□□□□ -0.56
VAT1-207ENST00000589828 NHSQ6T4R5 1651 aa11.56□□□□□ -0.56
VAT1-207ENST00000589828 IL2RBP14784 551 aa11.56□□□□□ -0.56
VAT1-207ENST00000589828 ATP10DQ9P241 1426 aa11.56□□□□□ -0.56
VAT1-207ENST00000589828 TRPM1Q7Z4N2 1603 aa11.56□□□□□ -0.56
VAT1-207ENST00000589828 AKAP12Q02952 1782 aa11.55□□□□□ -0.56
VAT1-207ENST00000589828 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
VAT1-207ENST00000589828 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
VAT1-207ENST00000589828 TTC21AQ8NDW8 1320 aa11.55□□□□□ -0.56
VAT1-207ENST00000589828 ABCC6O95255 1503 aa11.55□□□□□ -0.56
VAT1-207ENST00000589828 GRIN3BO60391 1043 aa11.54□□□□□ -0.56
VAT1-207ENST00000589828 HSPA6P17066 643 aa11.54□□□□□ -0.56
VAT1-207ENST00000589828 TFCP2L1Q9NZI6 479 aa11.54□□□□□ -0.56
VAT1-207ENST00000589828 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
VAT1-207ENST00000589828 ANKRD24Q8TF21 1146 aa11.53□□□□□ -0.56
VAT1-207ENST00000589828 EVC2Q86UK5 1308 aa11.53□□□□□ -0.56
VAT1-207ENST00000589828 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
VAT1-207ENST00000589828 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
VAT1-207ENST00000589828 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.57
VAT1-207ENST00000589828 DDX54Q8TDD1 881 aaKnown RBP11.52□□□□□ -0.57
VAT1-207ENST00000589828 PRIM1P49642 420 aaKnown RBP11.51□□□□□ -0.57
VAT1-207ENST00000589828 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
VAT1-207ENST00000589828 NME9Q86XW9 330 aa11.51□□□□□ -0.57
VAT1-207ENST00000589828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.51□□□□□ -0.57
VAT1-207ENST00000589828 ZNF526Q8TF50 670 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms