RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
APOC1-205ENST00000589781 CPDO75976 1380 aa13.72□□□□□ -0.21
APOC1-205ENST00000589781 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
APOC1-205ENST00000589781 PRDM11Q9NQV5 511 aa13.72□□□□□ -0.21
APOC1-205ENST00000589781 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
APOC1-205ENST00000589781 NLRP6P59044 892 aa13.71□□□□□ -0.21
APOC1-205ENST00000589781 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
APOC1-205ENST00000589781 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
APOC1-205ENST00000589781 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
APOC1-205ENST00000589781 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
APOC1-205ENST00000589781 NME9Q86XW9 330 aa13.7□□□□□ -0.22
APOC1-205ENST00000589781 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
APOC1-205ENST00000589781 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
APOC1-205ENST00000589781 MORC1Q86VD1 984 aa13.69□□□□□ -0.22
APOC1-205ENST00000589781 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
APOC1-205ENST00000589781 COL18A1P39060 1754 aa13.68□□□□□ -0.22
APOC1-205ENST00000589781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
APOC1-205ENST00000589781 NFAT5O94916 1531 aa13.68□□□□□ -0.22
APOC1-205ENST00000589781 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
APOC1-205ENST00000589781 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
APOC1-205ENST00000589781 TTC21AQ8NDW8 1320 aa13.67□□□□□ -0.22
APOC1-205ENST00000589781 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
APOC1-205ENST00000589781 BLMP54132 1417 aaPredicted RBP13.67□□□□□ -0.22
APOC1-205ENST00000589781 TNNT2P45379 298 aaPredicted RBP13.67□□□□□ -0.22
APOC1-205ENST00000589781 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
APOC1-205ENST00000589781 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
APOC1-205ENST00000589781 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
APOC1-205ENST00000589781 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
APOC1-205ENST00000589781 STRN4Q9NRL3 753 aa13.66□□□□□ -0.22
APOC1-205ENST00000589781 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
APOC1-205ENST00000589781 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
APOC1-205ENST00000589781 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
APOC1-205ENST00000589781 AATKQ6ZMQ8 1374 aa13.65□□□□□ -0.22
APOC1-205ENST00000589781 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
APOC1-205ENST00000589781 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
APOC1-205ENST00000589781 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
APOC1-205ENST00000589781 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
APOC1-205ENST00000589781 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
APOC1-205ENST00000589781 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
APOC1-205ENST00000589781 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
APOC1-205ENST00000589781 FYB1O15117 783 aa13.63□□□□□ -0.23
APOC1-205ENST00000589781 SOX12O15370 315 aa13.63□□□□□ -0.23
APOC1-205ENST00000589781 FBLN1P23142 703 aa13.63□□□□□ -0.23
APOC1-205ENST00000589781 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
APOC1-205ENST00000589781 EP400Q96L91 3159 aa13.61□□□□□ -0.23
APOC1-205ENST00000589781 INSRP06213 1382 aa13.61□□□□□ -0.23
APOC1-205ENST00000589781 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
APOC1-205ENST00000589781 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
APOC1-205ENST00000589781 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
APOC1-205ENST00000589781 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
APOC1-205ENST00000589781 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
APOC1-205ENST00000589781 MTHFSP49914 203 aa13.58□□□□□ -0.24
APOC1-205ENST00000589781 EVA1CP58658 441 aa13.58□□□□□ -0.24
APOC1-205ENST00000589781 KCNH5Q8NCM2 988 aa13.58□□□□□ -0.24
APOC1-205ENST00000589781 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
APOC1-205ENST00000589781 RGPD5Q99666 1765 aa13.58□□□□□ -0.24
APOC1-205ENST00000589781 CRB1P82279 1406 aa13.57□□□□□ -0.24
APOC1-205ENST00000589781 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
APOC1-205ENST00000589781 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
APOC1-205ENST00000589781 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
APOC1-205ENST00000589781 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
APOC1-205ENST00000589781 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
APOC1-205ENST00000589781 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
APOC1-205ENST00000589781 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
APOC1-205ENST00000589781 A0A0G2JS52 829 aa13.55□□□□□ -0.24
APOC1-205ENST00000589781 MYT1Q01538 1121 aa13.55□□□□□ -0.24
APOC1-205ENST00000589781 COG3Q96JB2 828 aa13.55□□□□□ -0.24
APOC1-205ENST00000589781 CFAP53Q96M91 514 aa13.55□□□□□ -0.24
APOC1-205ENST00000589781 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
APOC1-205ENST00000589781 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
APOC1-205ENST00000589781 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
APOC1-205ENST00000589781 CARD10Q9BWT7 1032 aa13.53□□□□□ -0.24
APOC1-205ENST00000589781 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
APOC1-205ENST00000589781 ERBB3P21860 1342 aa13.53□□□□□ -0.24
APOC1-205ENST00000589781 ABCC6O95255 1503 aa13.53□□□□□ -0.24
APOC1-205ENST00000589781 TOM1L2Q6ZVM7 507 aa13.52□□□□□ -0.25
APOC1-205ENST00000589781 PTF1AQ7RTS3 328 aa13.52□□□□□ -0.25
APOC1-205ENST00000589781 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
APOC1-205ENST00000589781 IP6K1Q92551 441 aa13.52□□□□□ -0.25
APOC1-205ENST00000589781 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.25
APOC1-205ENST00000589781 LTN1O94822 1766 aa13.51□□□□□ -0.25
APOC1-205ENST00000589781 PARP4Q9UKK3 1724 aaKnown RBP13.51□□□□□ -0.25
APOC1-205ENST00000589781 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
APOC1-205ENST00000589781 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
APOC1-205ENST00000589781 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
APOC1-205ENST00000589781 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
APOC1-205ENST00000589781 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
APOC1-205ENST00000589781 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
APOC1-205ENST00000589781 TRIM37O94972 964 aa13.49□□□□□ -0.25
APOC1-205ENST00000589781 HOXC9P31274 260 aa13.49□□□□□ -0.25
APOC1-205ENST00000589781 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
APOC1-205ENST00000589781 TNS1Q9HBL0 1735 aaKnown RBP13.48□□□□□ -0.25
APOC1-205ENST00000589781 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
APOC1-205ENST00000589781 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
APOC1-205ENST00000589781 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
APOC1-205ENST00000589781 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
APOC1-205ENST00000589781 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
APOC1-205ENST00000589781 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
APOC1-205ENST00000589781 APAF1O14727 1248 aa13.46□□□□□ -0.25
APOC1-205ENST00000589781 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms