RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 HMOX1P09601 288 aa19.6■□□□□ 0.73
MBD1-217ENST00000588937 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
MBD1-217ENST00000588937 STRCQ7RTU9 1775 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 ANKARQ7Z5J8 1434 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 USP31Q70CQ4 1352 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 PMFBP1Q8TBY8 1022 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
MBD1-217ENST00000588937 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.73
MBD1-217ENST00000588937 FMN2Q9NZ56 1722 aa19.58■□□□□ 0.72
MBD1-217ENST00000588937 FTSJ3Q8IY81 847 aaKnown RBP19.57■□□□□ 0.72
MBD1-217ENST00000588937 PHACTR3Q96KR7 559 aa19.57■□□□□ 0.72
MBD1-217ENST00000588937 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
MBD1-217ENST00000588937 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
MBD1-217ENST00000588937 GNAI1P63096 354 aa19.55■□□□□ 0.72
MBD1-217ENST00000588937 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
MBD1-217ENST00000588937 NGDNQ8NEJ9 315 aaKnown RBP19.55■□□□□ 0.72
MBD1-217ENST00000588937 IFT57Q9NWB7 429 aa19.55■□□□□ 0.72
MBD1-217ENST00000588937 ADGRL3Q9HAR2 1447 aa19.55■□□□□ 0.72
MBD1-217ENST00000588937 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
MBD1-217ENST00000588937 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
MBD1-217ENST00000588937 HSPA2P54652 639 aa19.55■□□□□ 0.72
MBD1-217ENST00000588937 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
MBD1-217ENST00000588937 RGPD8O14715 1765 aaPredicted RBP19.54■□□□□ 0.72
MBD1-217ENST00000588937 RLBP1P12271 317 aa19.54■□□□□ 0.72
MBD1-217ENST00000588937 SSH1Q8WYL5 1049 aa19.54■□□□□ 0.72
MBD1-217ENST00000588937 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
MBD1-217ENST00000588937 DLG5Q8TDM6 1919 aa19.53■□□□□ 0.72
MBD1-217ENST00000588937 IGHDP01880 384 aa19.52■□□□□ 0.72
MBD1-217ENST00000588937 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
MBD1-217ENST00000588937 ATF7IPQ6VMQ6 1270 aa19.52■□□□□ 0.71
MBD1-217ENST00000588937 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
MBD1-217ENST00000588937 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
MBD1-217ENST00000588937 RWDD1Q9H446 243 aaPredicted RBP19.51■□□□□ 0.71
MBD1-217ENST00000588937 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
MBD1-217ENST00000588937 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
MBD1-217ENST00000588937 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
MBD1-217ENST00000588937 PEAK1Q9H792 1746 aa19.5■□□□□ 0.71
MBD1-217ENST00000588937 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
MBD1-217ENST00000588937 SKAP1Q86WV1 359 aa19.49■□□□□ 0.71
MBD1-217ENST00000588937 DDX19BQ9UMR2 479 aa19.49■□□□□ 0.71
MBD1-217ENST00000588937 TNNQ9UQP3 1299 aa19.49■□□□□ 0.71
MBD1-217ENST00000588937 RGPD1P0DJD0 1748 aa19.49■□□□□ 0.71
MBD1-217ENST00000588937 TRIM27P14373 513 aa19.49■□□□□ 0.71
MBD1-217ENST00000588937 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
MBD1-217ENST00000588937 SBNO1A3KN83 1393 aa19.48■□□□□ 0.71
MBD1-217ENST00000588937 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
MBD1-217ENST00000588937 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
MBD1-217ENST00000588937 RGS3P49796 1198 aa19.47■□□□□ 0.71
MBD1-217ENST00000588937 PIK3C2AO00443 1686 aa19.47■□□□□ 0.71
MBD1-217ENST00000588937 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
MBD1-217ENST00000588937 FLT4P35916 1363 aa19.47■□□□□ 0.71
MBD1-217ENST00000588937 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
MBD1-217ENST00000588937 PCDHB15Q9Y5E8 787 aa19.47■□□□□ 0.71
MBD1-217ENST00000588937 USP54Q70EL1 1684 aa19.47■□□□□ 0.71
MBD1-217ENST00000588937 HSP90AB2PQ58FF8 381 aa19.45■□□□□ 0.7
MBD1-217ENST00000588937 MAP3K19Q56UN5 1328 aa19.45■□□□□ 0.7
MBD1-217ENST00000588937 KIF24Q5T7B8 1368 aa19.45■□□□□ 0.7
MBD1-217ENST00000588937 VAMP4O75379 141 aa19.44■□□□□ 0.7
MBD1-217ENST00000588937 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
MBD1-217ENST00000588937 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
MBD1-217ENST00000588937 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
MBD1-217ENST00000588937 MBIPQ9NS73 344 aa19.44■□□□□ 0.7
MBD1-217ENST00000588937 DCCP43146 1447 aa19.44■□□□□ 0.7
MBD1-217ENST00000588937 PROSER2Q86WR7 435 aaPredicted RBP19.44■□□□□ 0.7
MBD1-217ENST00000588937 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
MBD1-217ENST00000588937 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
MBD1-217ENST00000588937 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
MBD1-217ENST00000588937 AMPHP49418 695 aa19.42■□□□□ 0.7
MBD1-217ENST00000588937 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
MBD1-217ENST00000588937 DDRGK1Q96HY6 314 aa19.42■□□□□ 0.7
MBD1-217ENST00000588937 NLRP6P59044 892 aa19.42■□□□□ 0.7
MBD1-217ENST00000588937 C8orf34Q49A92 452 aa19.42■□□□□ 0.7
MBD1-217ENST00000588937 C19orf44Q9H6X5 657 aa19.42■□□□□ 0.7
MBD1-217ENST00000588937 SOX12O15370 315 aa19.41■□□□□ 0.7
MBD1-217ENST00000588937 MRPL50Q8N5N7 158 aaKnown RBP19.41■□□□□ 0.7
MBD1-217ENST00000588937 VIRMAQ69YN4 1812 aaKnown RBP19.41■□□□□ 0.7
MBD1-217ENST00000588937 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
MBD1-217ENST00000588937 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
MBD1-217ENST00000588937 TMEM57Q8N5G2 664 aa19.4■□□□□ 0.7
MBD1-217ENST00000588937 PHF8Q9UPP1 1060 aa19.39■□□□□ 0.7
MBD1-217ENST00000588937 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
MBD1-217ENST00000588937 KDRP35968 1356 aa19.38■□□□□ 0.69
MBD1-217ENST00000588937 TMEM94Q12767 1356 aa19.38■□□□□ 0.69
MBD1-217ENST00000588937 FAM83GA6ND36 823 aa19.38■□□□□ 0.69
MBD1-217ENST00000588937 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
MBD1-217ENST00000588937 TSPYL6Q8N831 410 aa19.37■□□□□ 0.69
MBD1-217ENST00000588937 ABTB2Q8N961 1025 aa19.37■□□□□ 0.69
MBD1-217ENST00000588937 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
MBD1-217ENST00000588937 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
MBD1-217ENST00000588937 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
MBD1-217ENST00000588937 DCTN1Q14203 1278 aa19.36■□□□□ 0.69
MBD1-217ENST00000588937 RBM33Q96EV2 1170 aaKnown RBP19.36■□□□□ 0.69
MBD1-217ENST00000588937 CHL1O00533 1208 aa19.35■□□□□ 0.69
MBD1-217ENST00000588937 PAK3O75914 559 aaPredicted RBP19.35■□□□□ 0.69
MBD1-217ENST00000588937 GAS2L2Q8NHY3 880 aa19.35■□□□□ 0.69
MBD1-217ENST00000588937 API5Q9BZZ5 524 aaKnown RBP19.35■□□□□ 0.69
MBD1-217ENST00000588937 KIF1AQ12756 1690 aa19.34■□□□□ 0.69
MBD1-217ENST00000588937 C8orf58Q8NAV2 365 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms