RNA–Protein interactions for RNA: ENST00000588842.1

AC079779.3-201, humanhuman

TSL 5 BASIC

Gene AC079779.3, Length 1,200 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079779.3-201ENST00000588842 COG3Q96JB2 828 aa16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 OVOS2A0A0J9YW53 1432 aa16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 ATRNO75882 1429 aa16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 OVOS2Q6IE36 1432 aa16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 NFAT5O94916 1531 aa16.84■□□□□ 0.29
AC079779.3-201ENST00000588842 CPDO75976 1380 aa16.83■□□□□ 0.28
AC079779.3-201ENST00000588842 RXRBP28702 533 aa16.83■□□□□ 0.28
AC079779.3-201ENST00000588842 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
AC079779.3-201ENST00000588842 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
AC079779.3-201ENST00000588842 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
AC079779.3-201ENST00000588842 LTN1O94822 1766 aa16.82■□□□□ 0.28
AC079779.3-201ENST00000588842 RGPD5Q99666 1765 aa16.82■□□□□ 0.28
AC079779.3-201ENST00000588842 FBLN1P23142 703 aa16.82■□□□□ 0.28
AC079779.3-201ENST00000588842 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
AC079779.3-201ENST00000588842 RBM6P78332 1123 aaKnown RBP16.81■□□□□ 0.28
AC079779.3-201ENST00000588842 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
AC079779.3-201ENST00000588842 COL18A1P39060 1754 aa16.8■□□□□ 0.28
AC079779.3-201ENST00000588842 EVA1CP58658 441 aa16.8■□□□□ 0.28
AC079779.3-201ENST00000588842 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
AC079779.3-201ENST00000588842 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
AC079779.3-201ENST00000588842 VPS72Q15906 364 aa16.79■□□□□ 0.28
AC079779.3-201ENST00000588842 GJD4Q96KN9 370 aaPredicted RBP16.79■□□□□ 0.28
AC079779.3-201ENST00000588842 GLI3P10071 1580 aa16.78■□□□□ 0.28
AC079779.3-201ENST00000588842 AXIN2Q9Y2T1 843 aa16.78■□□□□ 0.28
AC079779.3-201ENST00000588842 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
AC079779.3-201ENST00000588842 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
AC079779.3-201ENST00000588842 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
AC079779.3-201ENST00000588842 USP35Q9P2H5 1018 aa16.76■□□□□ 0.27
AC079779.3-201ENST00000588842 KNSTRNQ9Y448 316 aa16.76■□□□□ 0.27
AC079779.3-201ENST00000588842 COL5A2P05997 1499 aaPredicted RBP16.75■□□□□ 0.27
AC079779.3-201ENST00000588842 TNNT2P45379 298 aaPredicted RBP16.75■□□□□ 0.27
AC079779.3-201ENST00000588842 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
AC079779.3-201ENST00000588842 RGS12O14924 1447 aa16.75■□□□□ 0.27
AC079779.3-201ENST00000588842 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
AC079779.3-201ENST00000588842 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
AC079779.3-201ENST00000588842 CAPN15O75808 1086 aa16.74■□□□□ 0.27
AC079779.3-201ENST00000588842 SPATA31A5Q5VU36 1347 aa16.73■□□□□ 0.27
AC079779.3-201ENST00000588842 SPATA31A7Q8IWB4 1347 aa16.73■□□□□ 0.27
AC079779.3-201ENST00000588842 AMPHP49418 695 aa16.73■□□□□ 0.27
AC079779.3-201ENST00000588842 FAM98CQ17RN3 349 aaKnown RBP16.73■□□□□ 0.27
AC079779.3-201ENST00000588842 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
AC079779.3-201ENST00000588842 A0A0G2JS52 829 aa16.72■□□□□ 0.27
AC079779.3-201ENST00000588842 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
AC079779.3-201ENST00000588842 MYT1Q01538 1121 aa16.72■□□□□ 0.27
AC079779.3-201ENST00000588842 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
AC079779.3-201ENST00000588842 SPATA31A1Q5TZJ5 1347 aa16.71■□□□□ 0.27
AC079779.3-201ENST00000588842 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
AC079779.3-201ENST00000588842 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
AC079779.3-201ENST00000588842 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 PER1O15534 1290 aaPredicted RBP16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 IP6K1Q92551 441 aa16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
AC079779.3-201ENST00000588842 HOXC9P31274 260 aa16.69■□□□□ 0.26
AC079779.3-201ENST00000588842 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
AC079779.3-201ENST00000588842 SEPT12Q8IYM1 358 aa16.69■□□□□ 0.26
AC079779.3-201ENST00000588842 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
AC079779.3-201ENST00000588842 ABCC6O95255 1503 aa16.69■□□□□ 0.26
AC079779.3-201ENST00000588842 WDR17Q8IZU2 1322 aa16.69■□□□□ 0.26
AC079779.3-201ENST00000588842 NSD2O96028 1365 aa16.68■□□□□ 0.26
AC079779.3-201ENST00000588842 CRB1P82279 1406 aa16.68■□□□□ 0.26
AC079779.3-201ENST00000588842 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
AC079779.3-201ENST00000588842 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
AC079779.3-201ENST00000588842 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
AC079779.3-201ENST00000588842 ERBB3P21860 1342 aa16.67■□□□□ 0.26
AC079779.3-201ENST00000588842 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
AC079779.3-201ENST00000588842 HSP90AB2PQ58FF8 381 aa16.66■□□□□ 0.26
AC079779.3-201ENST00000588842 POLKQ9UBT6 870 aa16.66■□□□□ 0.26
AC079779.3-201ENST00000588842 ONECUT3O60422 494 aaPredicted RBP16.65■□□□□ 0.26
AC079779.3-201ENST00000588842 RTL1A6NKG5 1358 aa16.64■□□□□ 0.26
AC079779.3-201ENST00000588842 SOCS7O14512 581 aa16.64■□□□□ 0.25
AC079779.3-201ENST00000588842 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
AC079779.3-201ENST00000588842 THSD7AQ9UPZ6 1657 aa16.64■□□□□ 0.25
AC079779.3-201ENST00000588842 FLT4P35916 1363 aa16.64■□□□□ 0.25
AC079779.3-201ENST00000588842 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
AC079779.3-201ENST00000588842 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
AC079779.3-201ENST00000588842 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
AC079779.3-201ENST00000588842 FAM182BQ5T319 152 aa16.61■□□□□ 0.25
AC079779.3-201ENST00000588842 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
AC079779.3-201ENST00000588842 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
AC079779.3-201ENST00000588842 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
AC079779.3-201ENST00000588842 INSRP06213 1382 aa16.61■□□□□ 0.25
AC079779.3-201ENST00000588842 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
AC079779.3-201ENST00000588842 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
AC079779.3-201ENST00000588842 KIF24Q5T7B8 1368 aa16.59■□□□□ 0.25
AC079779.3-201ENST00000588842 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
AC079779.3-201ENST00000588842 NBPF6Q5VWK0 638 aa16.58■□□□□ 0.24
AC079779.3-201ENST00000588842 NBPF4Q96M43 638 aa16.58■□□□□ 0.24
AC079779.3-201ENST00000588842 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
AC079779.3-201ENST00000588842 LRRC37A3O60309 1634 aa16.57■□□□□ 0.24
AC079779.3-201ENST00000588842 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
AC079779.3-201ENST00000588842 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
AC079779.3-201ENST00000588842 MTHFSP49914 203 aa16.56■□□□□ 0.24
AC079779.3-201ENST00000588842 PDE3BQ13370 1112 aa16.56■□□□□ 0.24
AC079779.3-201ENST00000588842 EP400Q96L91 3159 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms