RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CRB1P82279 1406 aa24.78■■□□□ 1.56
TPM4-206ENST00000587201 AXIN2Q9Y2T1 843 aa24.78■■□□□ 1.56
TPM4-206ENST00000587201 TOM1L2Q6ZVM7 507 aa24.77■■□□□ 1.56
TPM4-206ENST00000587201 COL18A1P39060 1754 aa24.77■■□□□ 1.56
TPM4-206ENST00000587201 NFAT5O94916 1531 aa24.76■■□□□ 1.55
TPM4-206ENST00000587201 PDE3BQ13370 1112 aa24.75■■□□□ 1.55
TPM4-206ENST00000587201 CDCA8Q53HL2 280 aa24.75■■□□□ 1.55
TPM4-206ENST00000587201 DEFB132Q7Z7B7 95 aa24.75■■□□□ 1.55
TPM4-206ENST00000587201 WDR17Q8IZU2 1322 aa24.74■■□□□ 1.55
TPM4-206ENST00000587201 USP54Q70EL1 1684 aa24.73■■□□□ 1.55
TPM4-206ENST00000587201 CSB-PGBD3P0DP91 1061 aa24.73■■□□□ 1.55
TPM4-206ENST00000587201 ANKRD36BQ8N2N9 1353 aa24.72■■□□□ 1.55
TPM4-206ENST00000587201 BAG6P46379 1132 aa24.7■■□□□ 1.54
TPM4-206ENST00000587201 FAM196AQ6ZSG2 479 aa24.7■■□□□ 1.54
TPM4-206ENST00000587201 OVOS2A0A0J9YW53 1432 aa24.69■■□□□ 1.54
TPM4-206ENST00000587201 OVOS2Q6IE36 1432 aa24.69■■□□□ 1.54
TPM4-206ENST00000587201 RGPD5Q99666 1765 aa24.69■■□□□ 1.54
TPM4-206ENST00000587201 ABCC6O95255 1503 aa24.68■■□□□ 1.54
TPM4-206ENST00000587201 COG3Q96JB2 828 aa24.68■■□□□ 1.54
TPM4-206ENST00000587201 CARD10Q9BWT7 1032 aa24.66■■□□□ 1.54
TPM4-206ENST00000587201 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
TPM4-206ENST00000587201 PARP4Q9UKK3 1724 aaKnown RBP24.65■■□□□ 1.54
TPM4-206ENST00000587201 TRIM37O94972 964 aa24.64■■□□□ 1.54
TPM4-206ENST00000587201 DDB1Q16531 1140 aa24.64■■□□□ 1.54
TPM4-206ENST00000587201 LTN1O94822 1766 aa24.63■■□□□ 1.53
TPM4-206ENST00000587201 CDCA7Q9BWT1 371 aaPredicted RBP24.63■■□□□ 1.53
TPM4-206ENST00000587201 EIF4G2P78344 907 aaKnown RBP eCLIP24.62■■□□□ 1.533e-9■■■□□ 15.5
TPM4-206ENST00000587201 EN1Q05925 392 aaPredicted RBP24.62■■□□□ 1.53
TPM4-206ENST00000587201 ERBB3P21860 1342 aa24.61■■□□□ 1.53
TPM4-206ENST00000587201 CCDC7Q96M83 1385 aa24.61■■□□□ 1.53
TPM4-206ENST00000587201 ANKRD24Q8TF21 1146 aa24.6■■□□□ 1.53
TPM4-206ENST00000587201 FYB1O15117 783 aa24.59■■□□□ 1.53
TPM4-206ENST00000587201 POLR3GLQ9BT43 218 aa24.59■■□□□ 1.53
TPM4-206ENST00000587201 GGNBP2Q9H3C7 697 aa24.59■■□□□ 1.53
TPM4-206ENST00000587201 NLRP2Q9NX02 1062 aa24.59■■□□□ 1.53
TPM4-206ENST00000587201 LRRC37A3O60309 1634 aa24.59■■□□□ 1.53
TPM4-206ENST00000587201 TNS1Q9HBL0 1735 aaKnown RBP24.58■■□□□ 1.53
TPM4-206ENST00000587201 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
TPM4-206ENST00000587201 HSPA5P11021 654 aaKnown RBP24.58■■□□□ 1.53
TPM4-206ENST00000587201 IP6K1Q92551 441 aa24.58■■□□□ 1.53
TPM4-206ENST00000587201 WNK3Q9BYP7 1800 aa24.58■■□□□ 1.53
TPM4-206ENST00000587201 APBA3O96018 575 aa24.57■■□□□ 1.52
TPM4-206ENST00000587201 FBLN1P23142 703 aa24.57■■□□□ 1.52
TPM4-206ENST00000587201 OVOS2A0A0G2JMS6 1433 aa24.57■■□□□ 1.52
TPM4-206ENST00000587201 DISP2A7MBM2 1401 aa24.57■■□□□ 1.52
TPM4-206ENST00000587201 MYOM1P52179 1685 aa24.56■■□□□ 1.52
TPM4-206ENST00000587201 MAP3K19Q56UN5 1328 aa24.56■■□□□ 1.52
TPM4-206ENST00000587201 EXOC5O00471 708 aa24.55■■□□□ 1.52
TPM4-206ENST00000587201 AMPHP49418 695 aa24.55■■□□□ 1.52
TPM4-206ENST00000587201 EZH2Q15910 746 aaKnown RBP24.54■■□□□ 1.52
TPM4-206ENST00000587201 LTV1Q96GA3 475 aaPredicted RBP24.54■■□□□ 1.52
TPM4-206ENST00000587201 CARD14Q9BXL6 1004 aa24.54■■□□□ 1.52
TPM4-206ENST00000587201 NSD3Q9BZ95 1437 aa24.53■■□□□ 1.52
TPM4-206ENST00000587201 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
TPM4-206ENST00000587201 HOXC9P31274 260 aa24.52■■□□□ 1.52
TPM4-206ENST00000587201 CAMKK2Q96RR4 588 aa24.52■■□□□ 1.52
TPM4-206ENST00000587201 RRS1Q15050 365 aaKnown RBP24.51■■□□□ 1.51
TPM4-206ENST00000587201 PEAK1Q9H792 1746 aa24.5■■□□□ 1.51
TPM4-206ENST00000587201 KIF20BQ96Q89 1820 aa24.5■■□□□ 1.51
TPM4-206ENST00000587201 IL2RBP14784 551 aa24.5■■□□□ 1.51
TPM4-206ENST00000587201 TNS2Q63HR2 1409 aa24.48■■□□□ 1.51
TPM4-206ENST00000587201 RTL1A6NKG5 1358 aa24.47■■□□□ 1.51
TPM4-206ENST00000587201 PARD3Q8TEW0 1356 aa24.47■■□□□ 1.51
TPM4-206ENST00000587201 PSDA5PKW4 1024 aaPredicted RBP24.46■■□□□ 1.51
TPM4-206ENST00000587201 BCL9O00512 1426 aa24.44■■□□□ 1.5
TPM4-206ENST00000587201 FAM208AQ9UK61 1670 aaKnown RBP24.44■■□□□ 1.5
TPM4-206ENST00000587201 CGNL1Q0VF96 1302 aa24.44■■□□□ 1.5
TPM4-206ENST00000587201 BCL11BQ9C0K0 894 aaPredicted RBP24.44■■□□□ 1.5
TPM4-206ENST00000587201 SBF2Q86WG5 1849 aa24.42■■□□□ 1.5
TPM4-206ENST00000587201 R3HDM1Q15032 1099 aaKnown RBP24.41■■□□□ 1.5
TPM4-206ENST00000587201 PTF1AQ7RTS3 328 aa24.41■■□□□ 1.5
TPM4-206ENST00000587201 SMG6Q86US8 1419 aaKnown RBP24.41■■□□□ 1.5
TPM4-206ENST00000587201 FLT4P35916 1363 aa24.4■■□□□ 1.5
TPM4-206ENST00000587201 HSP90AB2PQ58FF8 381 aa24.39■■□□□ 1.49
TPM4-206ENST00000587201 PANK3Q9H999 370 aa24.39■■□□□ 1.49
TPM4-206ENST00000587201 KIF24Q5T7B8 1368 aa24.39■■□□□ 1.49
TPM4-206ENST00000587201 RREB1Q92766 1687 aa24.38■■□□□ 1.49
TPM4-206ENST00000587201 PLSCR1O15162 318 aa24.38■■□□□ 1.49
TPM4-206ENST00000587201 EMILIN1Q9Y6C2 1016 aa24.38■■□□□ 1.49
TPM4-206ENST00000587201 INSRP06213 1382 aa24.38■■□□□ 1.49
TPM4-206ENST00000587201 NBPF14Q5TI25 921 aa24.37■■□□□ 1.49
TPM4-206ENST00000587201 NBPF6Q5VWK0 638 aa24.37■■□□□ 1.49
TPM4-206ENST00000587201 ACSBG1Q96GR2 724 aa24.37■■□□□ 1.49
TPM4-206ENST00000587201 NBPF4Q96M43 638 aa24.37■■□□□ 1.49
TPM4-206ENST00000587201 PPM1GO15355 546 aaPredicted RBP24.36■■□□□ 1.49
TPM4-206ENST00000587201 DDX54Q8TDD1 881 aaKnown RBP24.36■■□□□ 1.49
TPM4-206ENST00000587201 RGPD2P0DJD1 1756 aa24.36■■□□□ 1.49
TPM4-206ENST00000587201 KCNQ2O43526 872 aa24.35■■□□□ 1.49
TPM4-206ENST00000587201 USHBP1Q8N6Y0 703 aa24.35■■□□□ 1.49
TPM4-206ENST00000587201 NUP188Q5SRE5 1749 aa24.35■■□□□ 1.49
TPM4-206ENST00000587201 SRCAPQ6ZRS2 3230 aa24.33■■□□□ 1.48
TPM4-206ENST00000587201 ZCRB1Q8TBF4 217 aaKnown RBP24.32■■□□□ 1.48
TPM4-206ENST00000587201 RGPD3A6NKT7 1758 aaPredicted RBP24.31■■□□□ 1.48
TPM4-206ENST00000587201 RGPD4Q7Z3J3 1758 aa24.31■■□□□ 1.48
TPM4-206ENST00000587201 MEGF6O75095 1541 aa24.31■■□□□ 1.48
TPM4-206ENST00000587201 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
TPM4-206ENST00000587201 RAPGEF4Q8WZA2 1011 aa24.31■■□□□ 1.48
TPM4-206ENST00000587201 NHSQ6T4R5 1651 aa24.3■■□□□ 1.48
TPM4-206ENST00000587201 TATP17735 454 aaPredicted RBP24.29■■□□□ 1.48
TPM4-206ENST00000587201 POLKQ9UBT6 870 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms