RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 WNK3Q9BYP7 1800 aa18.58■□□□□ 0.57
H3F3B-205ENST00000587171 NINLQ9Y2I6 1382 aa18.58■□□□□ 0.57
H3F3B-205ENST00000587171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.56
H3F3B-205ENST00000587171 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
H3F3B-205ENST00000587171 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.56
H3F3B-205ENST00000587171 USP47Q96K76 1375 aa18.57■□□□□ 0.56
H3F3B-205ENST00000587171 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
H3F3B-205ENST00000587171 AXIN2Q9Y2T1 843 aa18.57■□□□□ 0.56
H3F3B-205ENST00000587171 LTN1O94822 1766 aa18.56■□□□□ 0.56
H3F3B-205ENST00000587171 SOX12O15370 315 aa18.56■□□□□ 0.56
H3F3B-205ENST00000587171 NME9Q86XW9 330 aa18.56■□□□□ 0.56
H3F3B-205ENST00000587171 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
H3F3B-205ENST00000587171 WDR17Q8IZU2 1322 aa18.55■□□□□ 0.56
H3F3B-205ENST00000587171 BAG6P46379 1132 aa18.55■□□□□ 0.56
H3F3B-205ENST00000587171 DISP2A7MBM2 1401 aa18.55■□□□□ 0.56
H3F3B-205ENST00000587171 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
H3F3B-205ENST00000587171 FAM196AQ6ZSG2 479 aa18.54■□□□□ 0.56
H3F3B-205ENST00000587171 OVOS2A0A0J9YW53 1432 aa18.53■□□□□ 0.56
H3F3B-205ENST00000587171 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
H3F3B-205ENST00000587171 OVOS2Q6IE36 1432 aa18.53■□□□□ 0.56
H3F3B-205ENST00000587171 TOM1L2Q6ZVM7 507 aa18.53■□□□□ 0.56
H3F3B-205ENST00000587171 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
H3F3B-205ENST00000587171 TMF1P82094 1093 aa18.5■□□□□ 0.55
H3F3B-205ENST00000587171 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
H3F3B-205ENST00000587171 TRIM37O94972 964 aa18.49■□□□□ 0.55
H3F3B-205ENST00000587171 EN1Q05925 392 aaPredicted RBP18.49■□□□□ 0.55
H3F3B-205ENST00000587171 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
H3F3B-205ENST00000587171 CARD10Q9BWT7 1032 aa18.48■□□□□ 0.55
H3F3B-205ENST00000587171 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
H3F3B-205ENST00000587171 CDCA7Q9BWT1 371 aaPredicted RBP18.47■□□□□ 0.55
H3F3B-205ENST00000587171 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
H3F3B-205ENST00000587171 ERBB3P21860 1342 aa18.47■□□□□ 0.55
H3F3B-205ENST00000587171 DDB1Q16531 1140 aa18.46■□□□□ 0.55
H3F3B-205ENST00000587171 MYOM1P52179 1685 aa18.46■□□□□ 0.55
H3F3B-205ENST00000587171 CCDC7Q96M83 1385 aa18.45■□□□□ 0.54
H3F3B-205ENST00000587171 C11orf95C9JLR9 678 aaPredicted RBP18.45■□□□□ 0.54
H3F3B-205ENST00000587171 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
H3F3B-205ENST00000587171 RREB1Q92766 1687 aa18.44■□□□□ 0.54
H3F3B-205ENST00000587171 CAMKK2Q96RR4 588 aa18.44■□□□□ 0.54
H3F3B-205ENST00000587171 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
H3F3B-205ENST00000587171 APBA3O96018 575 aa18.43■□□□□ 0.54
H3F3B-205ENST00000587171 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
H3F3B-205ENST00000587171 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
H3F3B-205ENST00000587171 EZH2Q15910 746 aaKnown RBP18.42■□□□□ 0.54
H3F3B-205ENST00000587171 COG3Q96JB2 828 aa18.42■□□□□ 0.54
H3F3B-205ENST00000587171 BCL9O00512 1426 aa18.41■□□□□ 0.54
H3F3B-205ENST00000587171 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
H3F3B-205ENST00000587171 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
H3F3B-205ENST00000587171 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
H3F3B-205ENST00000587171 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
H3F3B-205ENST00000587171 NUP188Q5SRE5 1749 aa18.4■□□□□ 0.54
H3F3B-205ENST00000587171 MARCH10Q8NA82 808 aaPredicted RBP18.4■□□□□ 0.54
H3F3B-205ENST00000587171 ANKRD24Q8TF21 1146 aa18.4■□□□□ 0.54
H3F3B-205ENST00000587171 IP6K1Q92551 441 aa18.4■□□□□ 0.54
H3F3B-205ENST00000587171 FYB1O15117 783 aa18.39■□□□□ 0.53
H3F3B-205ENST00000587171 NLRP2Q9NX02 1062 aa18.39■□□□□ 0.53
H3F3B-205ENST00000587171 LRP5O75197 1615 aa18.38■□□□□ 0.53
H3F3B-205ENST00000587171 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
H3F3B-205ENST00000587171 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
H3F3B-205ENST00000587171 EXOC5O00471 708 aa18.37■□□□□ 0.53
H3F3B-205ENST00000587171 RGPD2P0DJD1 1756 aa18.36■□□□□ 0.53
H3F3B-205ENST00000587171 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
H3F3B-205ENST00000587171 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
H3F3B-205ENST00000587171 FBLN1P23142 703 aa18.35■□□□□ 0.53
H3F3B-205ENST00000587171 HOXC9P31274 260 aa18.35■□□□□ 0.53
H3F3B-205ENST00000587171 KAT6BQ8WYB5 2073 aa18.34■□□□□ 0.53
H3F3B-205ENST00000587171 IL2RBP14784 551 aa18.34■□□□□ 0.53
H3F3B-205ENST00000587171 R3HDM1Q15032 1099 aaKnown RBP18.34■□□□□ 0.53
H3F3B-205ENST00000587171 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
H3F3B-205ENST00000587171 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
H3F3B-205ENST00000587171 NSD3Q9BZ95 1437 aa18.33■□□□□ 0.53
H3F3B-205ENST00000587171 PLSCR1O15162 318 aa18.33■□□□□ 0.52
H3F3B-205ENST00000587171 AMPHP49418 695 aa18.33■□□□□ 0.52
H3F3B-205ENST00000587171 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.52
H3F3B-205ENST00000587171 NHSQ6T4R5 1651 aa18.32■□□□□ 0.52
H3F3B-205ENST00000587171 EIF4G2P78344 907 aaKnown RBP eCLIP18.32■□□□□ 0.52
H3F3B-205ENST00000587171 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
H3F3B-205ENST00000587171 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
H3F3B-205ENST00000587171 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
H3F3B-205ENST00000587171 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
H3F3B-205ENST00000587171 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
H3F3B-205ENST00000587171 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
H3F3B-205ENST00000587171 SHANK3Q9BYB0 1731 aa18.28■□□□□ 0.52
H3F3B-205ENST00000587171 MAP2P11137 1827 aaKnown RBP18.27■□□□□ 0.52
H3F3B-205ENST00000587171 FLT4P35916 1363 aa18.27■□□□□ 0.51
H3F3B-205ENST00000587171 BTAF1O14981 1849 aa18.26■□□□□ 0.51
H3F3B-205ENST00000587171 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
H3F3B-205ENST00000587171 KCNQ2O43526 872 aa18.26■□□□□ 0.51
H3F3B-205ENST00000587171 INSRP06213 1382 aa18.26■□□□□ 0.51
H3F3B-205ENST00000587171 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
H3F3B-205ENST00000587171 MEGF6O75095 1541 aa18.25■□□□□ 0.51
H3F3B-205ENST00000587171 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
H3F3B-205ENST00000587171 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
H3F3B-205ENST00000587171 PROM2Q8N271 834 aa18.24■□□□□ 0.51
H3F3B-205ENST00000587171 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
H3F3B-205ENST00000587171 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
H3F3B-205ENST00000587171 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
H3F3B-205ENST00000587171 ANO8Q9HCE9 1232 aaPredicted RBP18.22■□□□□ 0.51
H3F3B-205ENST00000587171 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
H3F3B-205ENST00000587171 DOT1LQ8TEK3 1739 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms