RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 WASHC2AQ641Q2 1341 aa13.49□□□□□ -0.25
H3F3B-204ENST00000586607 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
H3F3B-204ENST00000586607 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
H3F3B-204ENST00000586607 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
H3F3B-204ENST00000586607 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
H3F3B-204ENST00000586607 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
H3F3B-204ENST00000586607 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
H3F3B-204ENST00000586607 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
H3F3B-204ENST00000586607 CRB1P82279 1406 aa13.47□□□□□ -0.25
H3F3B-204ENST00000586607 WDR17Q8IZU2 1322 aa13.47□□□□□ -0.25
H3F3B-204ENST00000586607 EVA1CP58658 441 aa13.47□□□□□ -0.25
H3F3B-204ENST00000586607 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
H3F3B-204ENST00000586607 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
H3F3B-204ENST00000586607 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
H3F3B-204ENST00000586607 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.25
H3F3B-204ENST00000586607 IP6K1Q92551 441 aa13.46□□□□□ -0.25
H3F3B-204ENST00000586607 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
H3F3B-204ENST00000586607 ERBB3P21860 1342 aa13.45□□□□□ -0.26
H3F3B-204ENST00000586607 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
H3F3B-204ENST00000586607 SOX12O15370 315 aa13.45□□□□□ -0.26
H3F3B-204ENST00000586607 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
H3F3B-204ENST00000586607 LTN1O94822 1766 aa13.45□□□□□ -0.26
H3F3B-204ENST00000586607 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
H3F3B-204ENST00000586607 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
H3F3B-204ENST00000586607 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
H3F3B-204ENST00000586607 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
H3F3B-204ENST00000586607 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
H3F3B-204ENST00000586607 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
H3F3B-204ENST00000586607 KNSTRNQ9Y448 316 aa13.44□□□□□ -0.26
H3F3B-204ENST00000586607 HOXC9P31274 260 aa13.43□□□□□ -0.26
H3F3B-204ENST00000586607 ZBTB7CA1YPR0 619 aa13.42□□□□□ -0.26
H3F3B-204ENST00000586607 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
H3F3B-204ENST00000586607 AMPHP49418 695 aa13.41□□□□□ -0.26
H3F3B-204ENST00000586607 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
H3F3B-204ENST00000586607 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
H3F3B-204ENST00000586607 INSRP06213 1382 aa13.41□□□□□ -0.26
H3F3B-204ENST00000586607 FLT4P35916 1363 aa13.41□□□□□ -0.26
H3F3B-204ENST00000586607 FAM208AQ9UK61 1670 aaKnown RBP13.4□□□□□ -0.26
H3F3B-204ENST00000586607 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
H3F3B-204ENST00000586607 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
H3F3B-204ENST00000586607 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
H3F3B-204ENST00000586607 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
H3F3B-204ENST00000586607 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
H3F3B-204ENST00000586607 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
H3F3B-204ENST00000586607 FBLN1P23142 703 aa13.39□□□□□ -0.27
H3F3B-204ENST00000586607 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
H3F3B-204ENST00000586607 POLKQ9UBT6 870 aa13.39□□□□□ -0.27
H3F3B-204ENST00000586607 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
H3F3B-204ENST00000586607 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
H3F3B-204ENST00000586607 MORC1Q86VD1 984 aa13.37□□□□□ -0.27
H3F3B-204ENST00000586607 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
H3F3B-204ENST00000586607 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
H3F3B-204ENST00000586607 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
H3F3B-204ENST00000586607 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
H3F3B-204ENST00000586607 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
H3F3B-204ENST00000586607 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
H3F3B-204ENST00000586607 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
H3F3B-204ENST00000586607 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
H3F3B-204ENST00000586607 NCAPD2Q15021 1401 aa13.35□□□□□ -0.27
H3F3B-204ENST00000586607 BCL9O00512 1426 aa13.34□□□□□ -0.27
H3F3B-204ENST00000586607 A0A0G2JS52 829 aa13.34□□□□□ -0.27
H3F3B-204ENST00000586607 MYT1Q01538 1121 aa13.34□□□□□ -0.27
H3F3B-204ENST00000586607 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
H3F3B-204ENST00000586607 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
H3F3B-204ENST00000586607 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.27
H3F3B-204ENST00000586607 IL2RBP14784 551 aa13.33□□□□□ -0.28
H3F3B-204ENST00000586607 PDE3BQ13370 1112 aa13.33□□□□□ -0.28
H3F3B-204ENST00000586607 DDB1Q16531 1140 aa13.33□□□□□ -0.28
H3F3B-204ENST00000586607 EP400Q96L91 3159 aa13.33□□□□□ -0.28
H3F3B-204ENST00000586607 TNS2Q63HR2 1409 aa13.32□□□□□ -0.28
H3F3B-204ENST00000586607 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
H3F3B-204ENST00000586607 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
H3F3B-204ENST00000586607 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
H3F3B-204ENST00000586607 EXOC5O00471 708 aa13.31□□□□□ -0.28
H3F3B-204ENST00000586607 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-204ENST00000586607 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
H3F3B-204ENST00000586607 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-204ENST00000586607 TNNT2P45379 298 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-204ENST00000586607 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
H3F3B-204ENST00000586607 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
H3F3B-204ENST00000586607 EYA1Q99502 592 aa13.28□□□□□ -0.28
H3F3B-204ENST00000586607 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
H3F3B-204ENST00000586607 MTHFSP49914 203 aa13.27□□□□□ -0.29
H3F3B-204ENST00000586607 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-204ENST00000586607 MEGF6O75095 1541 aa13.27□□□□□ -0.29
H3F3B-204ENST00000586607 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
H3F3B-204ENST00000586607 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
H3F3B-204ENST00000586607 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
H3F3B-204ENST00000586607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
H3F3B-204ENST00000586607 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
H3F3B-204ENST00000586607 KDRP35968 1356 aa13.25□□□□□ -0.29
H3F3B-204ENST00000586607 TATP17735 454 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-204ENST00000586607 IL13P35225 146 aa13.25□□□□□ -0.29
H3F3B-204ENST00000586607 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
H3F3B-204ENST00000586607 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-204ENST00000586607 SF3B2Q13435 895 aaKnown RBP13.24□□□□□ -0.29
H3F3B-204ENST00000586607 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
H3F3B-204ENST00000586607 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
H3F3B-204ENST00000586607 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
H3F3B-204ENST00000586607 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms