RNA–Protein interactions for RNA: ENST00000586502.1

CXXC1-205, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-205ENST00000586502 CRB1P82279 1406 aa23.16■■□□□ 1.3
CXXC1-205ENST00000586502 USP54Q70EL1 1684 aa23.16■■□□□ 1.3
CXXC1-205ENST00000586502 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
CXXC1-205ENST00000586502 THRAP3Q9Y2W1 955 aaKnown RBP23.15■■□□□ 1.3
CXXC1-205ENST00000586502 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.3
CXXC1-205ENST00000586502 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
CXXC1-205ENST00000586502 OVOS2A0A0J9YW53 1432 aa23.14■■□□□ 1.29
CXXC1-205ENST00000586502 OVOS2Q6IE36 1432 aa23.14■■□□□ 1.29
CXXC1-205ENST00000586502 WDR17Q8IZU2 1322 aa23.12■■□□□ 1.29
CXXC1-205ENST00000586502 TOM1L2Q6ZVM7 507 aa23.12■■□□□ 1.29
CXXC1-205ENST00000586502 SF3B2Q13435 895 aaKnown RBP23.11■■□□□ 1.29
CXXC1-205ENST00000586502 ABCC6O95255 1503 aa23.1■■□□□ 1.29
CXXC1-205ENST00000586502 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
CXXC1-205ENST00000586502 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.29
CXXC1-205ENST00000586502 PDE3BQ13370 1112 aa23.08■■□□□ 1.29
CXXC1-205ENST00000586502 COG3Q96JB2 828 aa23.06■■□□□ 1.28
CXXC1-205ENST00000586502 EIF4G2P78344 907 aaKnown RBP eCLIP23.05■■□□□ 1.28
CXXC1-205ENST00000586502 FAM196AQ6ZSG2 479 aa23.05■■□□□ 1.28
CXXC1-205ENST00000586502 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
CXXC1-205ENST00000586502 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
CXXC1-205ENST00000586502 RGPD5Q99666 1765 aa23.04■■□□□ 1.28
CXXC1-205ENST00000586502 FYB1O15117 783 aa23.03■■□□□ 1.28
CXXC1-205ENST00000586502 HSPA5P11021 654 aaKnown RBP23.03■■□□□ 1.28
CXXC1-205ENST00000586502 ERBB3P21860 1342 aa23.03■■□□□ 1.28
CXXC1-205ENST00000586502 BAG6P46379 1132 aa23.02■■□□□ 1.28
CXXC1-205ENST00000586502 MYOM1P52179 1685 aa23.02■■□□□ 1.28
CXXC1-205ENST00000586502 LTN1O94822 1766 aa23.01■■□□□ 1.27
CXXC1-205ENST00000586502 TRIM37O94972 964 aa23.01■■□□□ 1.27
CXXC1-205ENST00000586502 GGNBP2Q9H3C7 697 aa23.01■■□□□ 1.27
CXXC1-205ENST00000586502 RGPD1P0DJD0 1748 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 FBLN1P23142 703 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 DDB1Q16531 1140 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 ANKRD24Q8TF21 1146 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 CDCA7Q9BWT1 371 aaPredicted RBP23■■□□□ 1.27
CXXC1-205ENST00000586502 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 LRRC37A3O60309 1634 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 CCDC7Q96M83 1385 aa23■■□□□ 1.27
CXXC1-205ENST00000586502 DISP2A7MBM2 1401 aa22.99■■□□□ 1.27
CXXC1-205ENST00000586502 IP6K1Q92551 441 aa22.99■■□□□ 1.27
CXXC1-205ENST00000586502 MAP3K19Q56UN5 1328 aa22.99■■□□□ 1.27
CXXC1-205ENST00000586502 EN1Q05925 392 aaPredicted RBP22.98■■□□□ 1.27
CXXC1-205ENST00000586502 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
CXXC1-205ENST00000586502 NLRP2Q9NX02 1062 aa22.98■■□□□ 1.27
CXXC1-205ENST00000586502 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
CXXC1-205ENST00000586502 TNS1Q9HBL0 1735 aaKnown RBP22.97■■□□□ 1.27
CXXC1-205ENST00000586502 WNK3Q9BYP7 1800 aa22.97■■□□□ 1.27
CXXC1-205ENST00000586502 OVOS2A0A0G2JMS6 1433 aa22.95■■□□□ 1.26
CXXC1-205ENST00000586502 HOXC9P31274 260 aa22.94■■□□□ 1.26
CXXC1-205ENST00000586502 AMPHP49418 695 aa22.94■■□□□ 1.26
CXXC1-205ENST00000586502 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
CXXC1-205ENST00000586502 MARCH10Q8NA82 808 aaPredicted RBP22.93■■□□□ 1.26
CXXC1-205ENST00000586502 LTV1Q96GA3 475 aaPredicted RBP22.93■■□□□ 1.26
CXXC1-205ENST00000586502 PEAK1Q9H792 1746 aa22.93■■□□□ 1.26
CXXC1-205ENST00000586502 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
CXXC1-205ENST00000586502 APBA3O96018 575 aa22.92■■□□□ 1.26
CXXC1-205ENST00000586502 EXOC5O00471 708 aa22.91■■□□□ 1.26
CXXC1-205ENST00000586502 EZH2Q15910 746 aaKnown RBP22.91■■□□□ 1.26
CXXC1-205ENST00000586502 KIF20BQ96Q89 1820 aa22.91■■□□□ 1.26
CXXC1-205ENST00000586502 TNS2Q63HR2 1409 aa22.91■■□□□ 1.26
CXXC1-205ENST00000586502 RTL1A6NKG5 1358 aa22.9■■□□□ 1.26
CXXC1-205ENST00000586502 SRCAPQ6ZRS2 3230 aa22.9■■□□□ 1.26
CXXC1-205ENST00000586502 CAMKK2Q96RR4 588 aa22.9■■□□□ 1.26
CXXC1-205ENST00000586502 IL2RBP14784 551 aa22.89■■□□□ 1.25
CXXC1-205ENST00000586502 CGNL1Q0VF96 1302 aa22.87■■□□□ 1.25
CXXC1-205ENST00000586502 BCL9O00512 1426 aa22.87■■□□□ 1.25
CXXC1-205ENST00000586502 PARD3Q8TEW0 1356 aa22.86■■□□□ 1.25
CXXC1-205ENST00000586502 FAM208AQ9UK61 1670 aaKnown RBP22.84■■□□□ 1.25
CXXC1-205ENST00000586502 PTF1AQ7RTS3 328 aa22.84■■□□□ 1.25
CXXC1-205ENST00000586502 PANK3Q9H999 370 aa22.84■■□□□ 1.25
CXXC1-205ENST00000586502 HSP90AB2PQ58FF8 381 aa22.83■■□□□ 1.25
CXXC1-205ENST00000586502 BCL11BQ9C0K0 894 aaPredicted RBP22.83■■□□□ 1.25
CXXC1-205ENST00000586502 FLT4P35916 1363 aa22.83■■□□□ 1.25
CXXC1-205ENST00000586502 INSRP06213 1382 aa22.82■■□□□ 1.24
CXXC1-205ENST00000586502 KIF24Q5T7B8 1368 aa22.82■■□□□ 1.24
CXXC1-205ENST00000586502 PSDA5PKW4 1024 aaPredicted RBP22.82■■□□□ 1.24
CXXC1-205ENST00000586502 EMILIN1Q9Y6C2 1016 aa22.82■■□□□ 1.24
CXXC1-205ENST00000586502 NBPF6Q5VWK0 638 aa22.81■■□□□ 1.24
CXXC1-205ENST00000586502 NBPF4Q96M43 638 aa22.81■■□□□ 1.24
CXXC1-205ENST00000586502 SMG6Q86US8 1419 aaKnown RBP22.81■■□□□ 1.24
CXXC1-205ENST00000586502 SBF2Q86WG5 1849 aa22.79■■□□□ 1.24
CXXC1-205ENST00000586502 R3HDM1Q15032 1099 aaKnown RBP22.78■■□□□ 1.24
CXXC1-205ENST00000586502 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
CXXC1-205ENST00000586502 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
CXXC1-205ENST00000586502 RREB1Q92766 1687 aa22.77■■□□□ 1.24
CXXC1-205ENST00000586502 PLSCR1O15162 318 aa22.77■■□□□ 1.24
CXXC1-205ENST00000586502 MEGF6O75095 1541 aa22.77■■□□□ 1.24
CXXC1-205ENST00000586502 PPM1GO15355 546 aaPredicted RBP22.76■■□□□ 1.23
CXXC1-205ENST00000586502 KCNQ2O43526 872 aa22.76■■□□□ 1.23
CXXC1-205ENST00000586502 RGPD2P0DJD1 1756 aa22.76■■□□□ 1.23
CXXC1-205ENST00000586502 TNNT2P45379 298 aaPredicted RBP22.75■■□□□ 1.23
CXXC1-205ENST00000586502 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
CXXC1-205ENST00000586502 ACSBG1Q96GR2 724 aa22.75■■□□□ 1.23
CXXC1-205ENST00000586502 POLKQ9UBT6 870 aa22.75■■□□□ 1.23
CXXC1-205ENST00000586502 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
CXXC1-205ENST00000586502 WASHC2AQ641Q2 1341 aa22.73■■□□□ 1.23
CXXC1-205ENST00000586502 ANKRD26Q9UPS8 1709 aa22.73■■□□□ 1.23
CXXC1-205ENST00000586502 NSD2O96028 1365 aa22.73■■□□□ 1.23
CXXC1-205ENST00000586502 RGPD3A6NKT7 1758 aaPredicted RBP22.72■■□□□ 1.23
CXXC1-205ENST00000586502 RGPD4Q7Z3J3 1758 aa22.72■■□□□ 1.23
CXXC1-205ENST00000586502 ZCRB1Q8TBF4 217 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms