RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
CSNK1D-226ENST00000585026 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.04
CSNK1D-226ENST00000585026 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
CSNK1D-226ENST00000585026 PARP4Q9UKK3 1724 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-226ENST00000585026 TTC21BQ7Z4L5 1316 aa15.33■□□□□ 0.04
CSNK1D-226ENST00000585026 SLIT3O75094 1523 aa15.33■□□□□ 0.04
CSNK1D-226ENST00000585026 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
CSNK1D-226ENST00000585026 BCL9O00512 1426 aa15.31■□□□□ 0.04
CSNK1D-226ENST00000585026 CPSF1Q10570 1443 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-226ENST00000585026 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
CSNK1D-226ENST00000585026 SOX12O15370 315 aa15.3■□□□□ 0.04
CSNK1D-226ENST00000585026 ROCK2O75116 1388 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-226ENST00000585026 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-226ENST00000585026 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
CSNK1D-226ENST00000585026 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
CSNK1D-226ENST00000585026 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
CSNK1D-226ENST00000585026 KTN1Q86UP2 1357 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-226ENST00000585026 TXNRD1Q16881 649 aa15.27■□□□□ 0.04
CSNK1D-226ENST00000585026 ANO8Q9HCE9 1232 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-226ENST00000585026 RGPD3A6NKT7 1758 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-226ENST00000585026 RGPD4Q7Z3J3 1758 aa15.26■□□□□ 0.03
CSNK1D-226ENST00000585026 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
CSNK1D-226ENST00000585026 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
CSNK1D-226ENST00000585026 SLC15A2Q16348 729 aa15.25■□□□□ 0.03
CSNK1D-226ENST00000585026 PTF1AQ7RTS3 328 aa15.25■□□□□ 0.03
CSNK1D-226ENST00000585026 PROM2Q8N271 834 aa15.25■□□□□ 0.03
CSNK1D-226ENST00000585026 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
CSNK1D-226ENST00000585026 ZBTB7AO95365 584 aa15.24■□□□□ 0.03
CSNK1D-226ENST00000585026 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
CSNK1D-226ENST00000585026 PIK3C2AO00443 1686 aa15.23■□□□□ 0.03
CSNK1D-226ENST00000585026 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-226ENST00000585026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.23■□□□□ 0.03
CSNK1D-226ENST00000585026 NLRP2Q9NX02 1062 aa15.23■□□□□ 0.03
CSNK1D-226ENST00000585026 COL18A1P39060 1754 aa15.22■□□□□ 0.03
CSNK1D-226ENST00000585026 SIN3AQ96ST3 1273 aa15.22■□□□□ 0.03
CSNK1D-226ENST00000585026 MTFR1LQ9H019 292 aa15.22■□□□□ 0.03
CSNK1D-226ENST00000585026 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-226ENST00000585026 ABCC6O95255 1503 aa15.22■□□□□ 0.03
CSNK1D-226ENST00000585026 TNS2Q63HR2 1409 aa15.21■□□□□ 0.03
CSNK1D-226ENST00000585026 IL2RBP14784 551 aa15.21■□□□□ 0.03
CSNK1D-226ENST00000585026 USP31Q70CQ4 1352 aa15.21■□□□□ 0.02
CSNK1D-226ENST00000585026 ERBB3P21860 1342 aa15.2■□□□□ 0.02
CSNK1D-226ENST00000585026 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
CSNK1D-226ENST00000585026 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
CSNK1D-226ENST00000585026 PTGER2P43116 358 aa15.19■□□□□ 0.02
CSNK1D-226ENST00000585026 ACSBG1Q96GR2 724 aa15.19■□□□□ 0.02
CSNK1D-226ENST00000585026 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
CSNK1D-226ENST00000585026 PDGFDQ9GZP0 370 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-226ENST00000585026 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
CSNK1D-226ENST00000585026 SBF2Q86WG5 1849 aa15.19■□□□□ 0.02
CSNK1D-226ENST00000585026 NFAT5O94916 1531 aa15.18■□□□□ 0.02
CSNK1D-226ENST00000585026 SYT17Q9BSW7 474 aa15.18■□□□□ 0.02
CSNK1D-226ENST00000585026 NME9Q86XW9 330 aa15.17■□□□□ 0.02
CSNK1D-226ENST00000585026 ANKRD24Q8TF21 1146 aa15.17■□□□□ 0.02
CSNK1D-226ENST00000585026 FHDC1Q9C0D6 1143 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-226ENST00000585026 AKAP12Q02952 1782 aa15.16■□□□□ 0.02
CSNK1D-226ENST00000585026 PUS7Q96PZ0 661 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-226ENST00000585026 ARXQ96QS3 562 aa15.16■□□□□ 0.02
CSNK1D-226ENST00000585026 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
CSNK1D-226ENST00000585026 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
CSNK1D-226ENST00000585026 WNK3Q9BYP7 1800 aa15.15■□□□□ 0.02
CSNK1D-226ENST00000585026 SLC27A3Q5K4L6 730 aa15.14■□□□□ 0.01
CSNK1D-226ENST00000585026 SLC16A10Q8TF71 515 aa15.14■□□□□ 0.01
CSNK1D-226ENST00000585026 SLC12A5Q9H2X9 1139 aa15.14■□□□□ 0.01
CSNK1D-226ENST00000585026 EDC4Q6P2E9 1401 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-226ENST00000585026 SGIP1Q9BQI5 828 aa15.13■□□□□ 0.01
CSNK1D-226ENST00000585026 ZNF784Q8NCA9 323 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-226ENST00000585026 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-226ENST00000585026 IP6K1Q92551 441 aa15.12■□□□□ 0.01
CSNK1D-226ENST00000585026 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
CSNK1D-226ENST00000585026 POLD1P28340 1107 aa15.11■□□□□ 0.01
CSNK1D-226ENST00000585026 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
CSNK1D-226ENST00000585026 NHSQ6T4R5 1651 aa15.1■□□□□ 0.01
CSNK1D-226ENST00000585026 MON2Q7Z3U7 1717 aa15.1■□□□□ 0.01
CSNK1D-226ENST00000585026 COG3Q96JB2 828 aa15.1■□□□□ 0.01
CSNK1D-226ENST00000585026 CD163L1Q9NR16 1453 aa15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 AMPHP49418 695 aa15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 GPR162Q16538 588 aa15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 MYOM1P52179 1685 aa15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
CSNK1D-226ENST00000585026 ZNF827Q17R98 1081 aa15.08■□□□□ 0
CSNK1D-226ENST00000585026 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
CSNK1D-226ENST00000585026 LRRC4BQ9NT99 713 aa15.08■□□□□ 0
CSNK1D-226ENST00000585026 TFCP2L1Q9NZI6 479 aa15.08■□□□□ 0
CSNK1D-226ENST00000585026 A0A1W2PP64 1363 aa15.08■□□□□ 0
CSNK1D-226ENST00000585026 AKT1S1Q96B36 256 aa15.07■□□□□ 0
CSNK1D-226ENST00000585026 USP54Q70EL1 1684 aa15.06■□□□□ 0
CSNK1D-226ENST00000585026 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
CSNK1D-226ENST00000585026 KLHL34Q8N239 644 aa15.06■□□□□ 0
CSNK1D-226ENST00000585026 ZCRB1Q8TBF4 217 aaKnown RBP15.06■□□□□ 0
CSNK1D-226ENST00000585026 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
CSNK1D-226ENST00000585026 ANKRD36BQ8N2N9 1353 aa15.05■□□□□ -0
CSNK1D-226ENST00000585026 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
CSNK1D-226ENST00000585026 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
CSNK1D-226ENST00000585026 HOXC9P31274 260 aa15.04■□□□□ -0
CSNK1D-226ENST00000585026 CCER1Q8TC90 406 aaPredicted RBP15.04■□□□□ -0
CSNK1D-226ENST00000585026 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
CSNK1D-226ENST00000585026 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 358.8 ms