RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 TERF2IPQ9NYB0 399 aa25.34■■□□□ 1.65
SRSF1-208ENST00000584773 RGPD1P0DJD0 1748 aa25.32■■□□□ 1.64
SRSF1-208ENST00000584773 TNS1Q9HBL0 1735 aaKnown RBP25.31■■□□□ 1.64
SRSF1-208ENST00000584773 LTN1O94822 1766 aa25.31■■□□□ 1.64
SRSF1-208ENST00000584773 TOM1L2Q6ZVM7 507 aa25.31■■□□□ 1.64
SRSF1-208ENST00000584773 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
SRSF1-208ENST00000584773 TIMELESSQ9UNS1 1208 aa25.31■■□□□ 1.64
SRSF1-208ENST00000584773 PARP4Q9UKK3 1724 aaKnown RBP25.31■■□□□ 1.64
SRSF1-208ENST00000584773 TMF1P82094 1093 aa25.3■■□□□ 1.64
SRSF1-208ENST00000584773 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
SRSF1-208ENST00000584773 WDR17Q8IZU2 1322 aa25.3■■□□□ 1.64
SRSF1-208ENST00000584773 OVOS2A0A0J9YW53 1432 aa25.3■■□□□ 1.64
SRSF1-208ENST00000584773 OVOS2Q6IE36 1432 aa25.3■■□□□ 1.64
SRSF1-208ENST00000584773 THRAP3Q9Y2W1 955 aaKnown RBP25.29■■□□□ 1.64
SRSF1-208ENST00000584773 NINLQ9Y2I6 1382 aa25.29■■□□□ 1.64
SRSF1-208ENST00000584773 LRRC37A3O60309 1634 aa25.28■■□□□ 1.64
SRSF1-208ENST00000584773 PDE3BQ13370 1112 aa25.27■■□□□ 1.64
SRSF1-208ENST00000584773 TRIM37O94972 964 aa25.26■■□□□ 1.63
SRSF1-208ENST00000584773 CSB-PGBD3P0DP91 1061 aa25.26■■□□□ 1.63
SRSF1-208ENST00000584773 ANKRD36BQ8N2N9 1353 aa25.25■■□□□ 1.63
SRSF1-208ENST00000584773 SLC24A1O60721 1099 aa25.24■■□□□ 1.63
SRSF1-208ENST00000584773 BAG6P46379 1132 aa25.24■■□□□ 1.63
SRSF1-208ENST00000584773 EN1Q05925 392 aaPredicted RBP25.24■■□□□ 1.63
SRSF1-208ENST00000584773 MYOM1P52179 1685 aa25.23■■□□□ 1.63
SRSF1-208ENST00000584773 FAM196AQ6ZSG2 479 aa25.23■■□□□ 1.63
SRSF1-208ENST00000584773 ABCC6O95255 1503 aa25.23■■□□□ 1.63
SRSF1-208ENST00000584773 FBLN1P23142 703 aa25.22■■□□□ 1.63
SRSF1-208ENST00000584773 CARD10Q9BWT7 1032 aa25.2■■□□□ 1.62
SRSF1-208ENST00000584773 PEAK1Q9H792 1746 aa25.2■■□□□ 1.62
SRSF1-208ENST00000584773 ERBB3P21860 1342 aa25.19■■□□□ 1.62
SRSF1-208ENST00000584773 SRCAPQ6ZRS2 3230 aa25.18■■□□□ 1.62
SRSF1-208ENST00000584773 DISP2A7MBM2 1401 aa25.18■■□□□ 1.62
SRSF1-208ENST00000584773 EZH2Q15910 746 aaKnown RBP25.17■■□□□ 1.62
SRSF1-208ENST00000584773 DDB1Q16531 1140 aa25.17■■□□□ 1.62
SRSF1-208ENST00000584773 COG3Q96JB2 828 aa25.17■■□□□ 1.62
SRSF1-208ENST00000584773 APBA3O96018 575 aa25.15■■□□□ 1.62
SRSF1-208ENST00000584773 ANKRD24Q8TF21 1146 aa25.15■■□□□ 1.62
SRSF1-208ENST00000584773 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
SRSF1-208ENST00000584773 KIF20BQ96Q89 1820 aa25.15■■□□□ 1.62
SRSF1-208ENST00000584773 NLRP2Q9NX02 1062 aa25.14■■□□□ 1.62
SRSF1-208ENST00000584773 SBF2Q86WG5 1849 aa25.14■■□□□ 1.62
SRSF1-208ENST00000584773 OVOS2A0A0G2JMS6 1433 aa25.14■■□□□ 1.62
SRSF1-208ENST00000584773 FYB1O15117 783 aa25.13■■□□□ 1.61
SRSF1-208ENST00000584773 CDCA8Q53HL2 280 aa25.13■■□□□ 1.61
SRSF1-208ENST00000584773 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
SRSF1-208ENST00000584773 CCDC7Q96M83 1385 aa25.13■■□□□ 1.61
SRSF1-208ENST00000584773 PSDA5PKW4 1024 aaPredicted RBP25.12■■□□□ 1.61
SRSF1-208ENST00000584773 MARCH10Q8NA82 808 aaPredicted RBP25.12■■□□□ 1.61
SRSF1-208ENST00000584773 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
SRSF1-208ENST00000584773 CAMKK2Q96RR4 588 aa25.12■■□□□ 1.61
SRSF1-208ENST00000584773 POLR3GLQ9BT43 218 aa25.12■■□□□ 1.61
SRSF1-208ENST00000584773 CARD14Q9BXL6 1004 aa25.12■■□□□ 1.61
SRSF1-208ENST00000584773 HSPA5P11021 654 aaKnown RBP25.11■■□□□ 1.61
SRSF1-208ENST00000584773 PTF1AQ7RTS3 328 aa25.11■■□□□ 1.61
SRSF1-208ENST00000584773 IP6K1Q92551 441 aa25.11■■□□□ 1.61
SRSF1-208ENST00000584773 NSD3Q9BZ95 1437 aa25.1■■□□□ 1.61
SRSF1-208ENST00000584773 RRS1Q15050 365 aaKnown RBP25.1■■□□□ 1.61
SRSF1-208ENST00000584773 CDCA7Q9BWT1 371 aaPredicted RBP25.1■■□□□ 1.61
SRSF1-208ENST00000584773 RGPD2P0DJD1 1756 aa25.09■■□□□ 1.61
SRSF1-208ENST00000584773 RREB1Q92766 1687 aa25.09■■□□□ 1.61
SRSF1-208ENST00000584773 TNS2Q63HR2 1409 aa25.08■■□□□ 1.61
SRSF1-208ENST00000584773 HOXC9P31274 260 aa25.08■■□□□ 1.6
SRSF1-208ENST00000584773 EIF4G2P78344 907 aaKnown RBP eCLIP25.07■■□□□ 1.6
SRSF1-208ENST00000584773 NUP188Q5SRE5 1749 aa25.06■■□□□ 1.6
SRSF1-208ENST00000584773 EXOC5O00471 708 aa25.06■■□□□ 1.6
SRSF1-208ENST00000584773 AMPHP49418 695 aa25.06■■□□□ 1.6
SRSF1-208ENST00000584773 FAM208AQ9UK61 1670 aaKnown RBP25.04■■□□□ 1.6
SRSF1-208ENST00000584773 IL2RBP14784 551 aa25.04■■□□□ 1.6
SRSF1-208ENST00000584773 R3HDM1Q15032 1099 aaKnown RBP25.04■■□□□ 1.6
SRSF1-208ENST00000584773 PARD3Q8TEW0 1356 aa25■■□□□ 1.59
SRSF1-208ENST00000584773 C11orf95C9JLR9 678 aaPredicted RBP25■■□□□ 1.59
SRSF1-208ENST00000584773 BCL9O00512 1426 aa24.99■■□□□ 1.59
SRSF1-208ENST00000584773 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
SRSF1-208ENST00000584773 BCL11BQ9C0K0 894 aaPredicted RBP24.98■■□□□ 1.59
SRSF1-208ENST00000584773 KCNQ2O43526 872 aa24.97■■□□□ 1.59
SRSF1-208ENST00000584773 ACSBG1Q96GR2 724 aa24.97■■□□□ 1.59
SRSF1-208ENST00000584773 USHBP1Q8N6Y0 703 aa24.96■■□□□ 1.59
SRSF1-208ENST00000584773 EMILIN1Q9Y6C2 1016 aa24.96■■□□□ 1.59
SRSF1-208ENST00000584773 RGPD3A6NKT7 1758 aaPredicted RBP24.96■■□□□ 1.59
SRSF1-208ENST00000584773 RGPD4Q7Z3J3 1758 aa24.96■■□□□ 1.59
SRSF1-208ENST00000584773 NHSQ6T4R5 1651 aa24.96■■□□□ 1.59
SRSF1-208ENST00000584773 HSP90AB2PQ58FF8 381 aa24.95■■□□□ 1.58
SRSF1-208ENST00000584773 MEGF6O75095 1541 aa24.95■■□□□ 1.58
SRSF1-208ENST00000584773 NBPF6Q5VWK0 638 aa24.94■■□□□ 1.58
SRSF1-208ENST00000584773 NBPF4Q96M43 638 aa24.94■■□□□ 1.58
SRSF1-208ENST00000584773 LRP5O75197 1615 aa24.94■■□□□ 1.58
SRSF1-208ENST00000584773 SHANK3Q9BYB0 1731 aa24.94■■□□□ 1.58
SRSF1-208ENST00000584773 KAT6BQ8WYB5 2073 aa24.93■■□□□ 1.58
SRSF1-208ENST00000584773 CGNL1Q0VF96 1302 aa24.92■■□□□ 1.58
SRSF1-208ENST00000584773 PLSCR1O15162 318 aa24.91■■□□□ 1.58
SRSF1-208ENST00000584773 PROM2Q8N271 834 aa24.91■■□□□ 1.58
SRSF1-208ENST00000584773 DDX54Q8TDD1 881 aaKnown RBP24.91■■□□□ 1.58
SRSF1-208ENST00000584773 PANK3Q9H999 370 aa24.91■■□□□ 1.58
SRSF1-208ENST00000584773 FLT4P35916 1363 aa24.91■■□□□ 1.58
SRSF1-208ENST00000584773 ANKRD26Q9UPS8 1709 aa24.91■■□□□ 1.58
SRSF1-208ENST00000584773 MAP2P11137 1827 aaKnown RBP24.91■■□□□ 1.58
SRSF1-208ENST00000584773 INSRP06213 1382 aa24.9■■□□□ 1.58
SRSF1-208ENST00000584773 BTAF1O14981 1849 aa24.89■■□□□ 1.58
SRSF1-208ENST00000584773 ANO8Q9HCE9 1232 aaPredicted RBP24.89■■□□□ 1.58
SRSF1-208ENST00000584773 SMG6Q86US8 1419 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms